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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057799 ID=TCONS_00057799|Name=TCONS_00057799|organism=Clytia hemisphaerica|type=transcript|length=1138bp
TAAATTTTTCCACTTTCCTCTTCTTTATATCAAATAAAACTTCGGGATAT
TGTTTAGTaaggttcaaactttaatttaaaccaaaaattgaaaaatcgac
ccAAAAAAGATGATCCTATCTCAGAagtgttaacgaccaccttaatAAAA
AGGCAAGAGCAaaatgtttttccatttttcagtcaagcttttctcaaaaa
ataggtCGTTCGTGGGTCGATCATTCAAGTTCGTAAATCAGAAGCGAAAA
TAATGATGACCTTCAGGTAGGCTTGATGACTAgagaaaaattgatgaata
tgCAAGTTGCTGggttaaataaaaatgaagtatGAAAACTTTGAGGACAT
AAATAAATTAgctgaaattgttttgtttttttaatttttcaaagttgaaa
aattcgTAATAAAGGAGTGATTTTAGCCTTTACAAGAGagtcaaaaatca
aagattttccttgtcggcgcaaaccatggtttcgcctccttagtcactac
atctttttaaaattaagttcataTAGTCTCCATTACTTTCAGAGAAATGT
ACTTTCAAACTCCACTTTTACTTTATCCAAAGAACATACAAGTATGAGTA
TATGAGAAAATCCTTTTAATTTATGCAGTTAATTCTAGTCAGTAGGGCAA
AGTTTCCCGATTGGGAGACAATCCTGCATCAAACTCCGGTGATACTGGCT
GCTTGAATTCGCGTAAAAATATTCTTGGTTGGAAAAGCTTATGAAAGTAG
AgtagaatattttaaaattttgtcagTCAATATTAAAATCATTCGGTCAA
AAGTTGATAAATTCATTTATCTTTCCATTGATCCATTTTTTAGCTTCCCT
TTTTGCCCCAATTTCCTCCCTTTTTCACTTCAAGATTGACGTTGTATGGA
CGTTAAATGAATGTCGCTCTTGCAAAATCGTTTCCCCTTCGGGAGACGTC
TCCCAAACGGGATTCGTCTCCCGATCGAGGTATATTGCCCTATTGTTAGT
AATGGATGATGTTTTGTGGTTTTATGATTAAAAGTCTTATACCTCACAGT
TTCAACGCAGTTTAAAAATATATTCCCTATCAGTAGCCTCAGATAGTGTA
ACAACGACTCCGCACTACATTTTATAATTTAACATTTG Run BLAST on NCBI transcript from alignment at scaffold_298:25151..26288 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057799 ID=TCONS_00057799|Name=TCONS_00057799|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_298:25151..26288 (Clytia hemisphaerica)
CAAATGTTAAATTATAAAATGTAGTGCGGAGTCGTTGTTACACTATCTGA
GGCTACTGATAGGGAATATATTTTTAAACTGCGTTGAAACTGTGAGGTAT
AAGACTTTTAATCATAAAACCACAAAACATCATCCATTACTAACAATAGG
GCAATATACCTCGATCGGGAGACGAATCCCGTTTGGGAGACGTCTCCCGA
AGGGGAAACGATTTTGCAAGAGCGACATTCATTTAACGTCCATACAACGT
CAATCTTGAAGTGAAAAAGGGAGGAAATTGGGGCAAAAAGGGAAGCTAAA
AAATGGATCAATGGAAAGATAAATGAATTTATCAACTTTTGACCGAATGA
TTTTAATATTGActgacaaaattttaaaatattctacTCTACTTTCATAA
GCTTTTCCAACCAAGAATATTTTTACGCGAATTCAAGCAGCCAGTATCAC
CGGAGTTTGATGCAGGATTGTCTCCCAATCGGGAAACTTTGCCCTACTGA
CTAGAATTAACTGCATAAATTAAAAGGATTTTCTCATATACTCATACTTG
TATGTTCTTTGGATAAAGTAAAAGTGGAGTTTGAAAGTACATTTCTCTGA
AAGTAATGGAGACTAtatgaacttaattttaaaaagatgtagtgactaag
gaggcgaaaccatggtttgcgccgacaaggaaaatctttgatttttgact
CTCTTGTAAAGGCTAAAATCACTCCTTTATTAcgaatttttcaactttga
aaaattaaaaaaacaaaacaatttcagcTAATTTATTTATGTCCTCAAAG
TTTTCatacttcatttttatttaaccCAGCAACTTGcatattcatcaatt
tttctcTAGTCATCAAGCCTACCTGAAGGTCATCATTATTTTCGCTTCTG
ATTTACGAACTTGAATGATCGACCCACGAACGacctattttttgagaaaa
gcttgactgaaaaatggaaaaacatttTGCTCTTGCCTTTTTattaaggt
ggtcgttaacactTCTGAGATAGGATCATCTTTTTTgggtcgatttttca
atttttggtttaaattaaagtttgaaccttACTAAACAATATCCCGAAGT
TTTATTTGATATAAAGAAGAGGAAAGTGGAAAAATTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057799-exon-scaffold_298-1491911889:25151..26288 | TCONS_00057799-exon-scaffold_298-1491911889:25151..26288 | Clytia hemisphaerica | exon |
| TCONS_00057799-exon-scaffold_298-1510915933:25151..26288 | TCONS_00057799-exon-scaffold_298-1510915933:25151..26288 | Clytia hemisphaerica | exon |
| TCONS_00057799-exon-scaffold_298-1575043694:25151..26288 | TCONS_00057799-exon-scaffold_298-1575043694:25151..26288 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_298 | supercontig | scaffold_298:25151..26288 . |
Blast
The following BLAST results are available for this feature:
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