TCONS_00057788 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057788
Unique NameTCONS_00057788
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1475

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057788 ID=TCONS_00057788|Name=TCONS_00057788|organism=Clytia hemisphaerica|type=transcript|length=1475bp
TGGATGAATGGAAAAACGTCCGGATAAAAGAAGAAAGAACCACGCATAAA
GGAAATCATCCATAACCTGTCCCAGCACACAGCTTAGCTTATCAAAGAGA
TTTTATGAAAATCCTTATTGGAAGATAAAAGAACATTTATTAAAGATGAA
GATATTTTCCTCCGAAACTGTAACGAACTTTTTATATATAACCTGCGTTT
TACTTGCGCTACTCATACCCAACACAGATGGACGCCGCGGTCGCCGCAGG
AAATTTAAACGTGGCTACCTTAGTAACCGACCAAACATTATATTCATAAT
GGCGGATGATCTTGACGTCACGTTAGGCTCGCCTGACGTCATGCGAAAAA
CGAACGTTCTTTTACGCCAACAGGGCGTGACTTTCAAAAACGCCTTCACG
ACGTCGCCCCTGTGTTGTCCGTCACGTTCTTCGATCTTGACCGGTAGATA
CACCCATAATCATCACGTGCATAGCAATAATAAGAATTGTTCGGGCCCTG
GGTGGAtcaataaagaagaaaaagagaCCATGGGTGTTTTCATGCAGCAA
GCTGGTTACCAGACCGCGTATTTCGGCAAATACTTGAACAACTACGATGG
TGGGCGAGTGCCGCCCGGTTGGGACCACTGGAACGCGTTGCGTGGCAACA
GTCGTTTCTATAACTACACACTCAATATCAACGGAAAATTGAAGAGGCAT
AATCACGAGTATAAGAAAGATTACTTCACGAATGTCATCACAGATCAAAG
CACGCATGGACTATTTCACAAAACATTCCCTCAAAGCCAACGATAAACCT
TTATTCATGGTTGTCTCACATTCGGCCCCTCATGGTCCAGAAGACGGGGC
CCCGCACCATTATGACAAATTCCCCGACGCCAAAGCACCAAgGCATCCTA
ACTACAATTTCACTTCACTCGATAAACATTGGATCATTCGAAACACGCCG
CCTCTAAATAATGTGACGTCACAATTCACCgatgttctacatcgtaaacG
GCTGATCACCCTTCTCGCTTTGGACGATGCGATCGAAAACCTGTTCATCA
TGTTAATGAAAACAGGACAACTACACAACACTTATGTGTTTTTCTCATCT
GACCATGGATATCACCTTGGTCAGTTTAACCAAGTGAAAGGGAAATCACA
GCCGTACGAATCCGATATTCGAATACCATTGTACATGCGAGGACCGAAAA
TTCCCAAGGGAGAGGTGAGAGAAAAAATTGCATTAAATATTGATTTGGCG
CCGACCTTCTTAGACATTGCAGGCGCCAAACCGAACAAAATTATGGACGG
AACAAGTTTGATGGATGTGGCCGTCGGAACCATTTATAACAGCATCAATG
GGTAAGTTTGTTATAAATATATTACTTTCTTCATAATAACTCTCTTTGTT
TCAGTGTCTTGCTTGAATTCACCTTCAAGTCCAGGACAAACATCttacac
atttttataagaacatgcaaaATTG
Run BLAST on NCBI

transcript from alignment at scaffold_298:311909..325203-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057788 ID=TCONS_00057788|Name=TCONS_00057788|organism=Clytia hemisphaerica|type=transcript|length=13295bp|location=Sequence derived from alignment at scaffold_298:311909..325203- (Clytia hemisphaerica)
TGGATGAATGGAAAAACGTCCGGATAAAAGGTACTGTATCGGCCTTATCC
AGCAACATGTTCGTTCTGTAAAGACATCGGATATCGGCAATCTATTTTTC
AAAGTTTTTTTTCAAAATTTCCAATTGCGAAAGTTGCAAAATTGCATGAA
GTACTAGTATTGTCTGTCTAATAATAGCTTTGACCTTCGCCATTACATAT
TTCATACAACGGATGAAATCGTTAAGCAGGACACTTTAATGTCGTCTTAA
TTACGTCGTCATGACTTAATTTTCGCTTTCTTTCTCTTTATTTTGCAGAA
GAAAGAACCACGCATAAAGGAAATCATCCATAACCTGTCCCAGCACACAG
CTTAGCTTATCAAAGAGATTTTATGAAAATCCTTATTGGAAGATAAAAGA
ACATTTATTAAAGATGAAGATATTTTCCTCCGAAACTGTAACGAACTTTT
TATATATAACCTGCGTTTTACTTGCGCTACTCATACCCAACACAGATGGA
CGCCGCGGTCGCCGCAGGAAATTTAAACGTGGCTACCTTAGTAACCGACC
AAACATTATATTCATAATGGCGGATGATCTTGACGTCACGTTAGGCTCGC
CTGACGTCATGCGAAAAACGAACGTTCTTTTACGCCAACAGGGCGTGACT
TTCAAAAACGCCTTCACGACGTCGCCCCTGTGTTGTCCGTCACGTTCTTC
GATCTTGACCGGTAGATACACCCATAATCATCACGTGCATAGCAATAATA
AGAATTGTTCGGGCCCTGGGTGGATCAATAAAGAAGAAAAAGAGACCATG
GGTGTTTTCATGCAGCAAGCTGGTTACCAGACCGGTAAGTGTGATTCTTT
ATATAGAATGTTATGTTAAGTGGATTGATTTTCGCGAATTGTGGCTAGTT
TGCGTAATTTTGTCCATCGTTTTGATTAGTCCCCCCTGAGAGGGAGAACT
CGCATCAGCCGACACCAGGGTATCATCTGGTGTCAATTAGTTACGTAAAT
AAAGCATGGAATACACGGGGACGAGGTTGGGTAAGGATATATAACAAAAA
CTCTAGCTTGGCGATGAAGCCTTCTTACGAGTATAATTGATCCTGTTTTT
AACCCCTTACATAAATCACACCTCTCCTATTGGAGTTTATAGTCAGGGGC
TGAGCCAGGTCAACCTATACACTGTATGTAAGCAACATTTTGATGAACTT
GATAGTTTGACGTCAAACAGTCAAAACTCTTGAGTTTGTGTTTATAAACC
ATTTCGGCTTACTTTACCGGCCTAGTCATGCACTTAAATCAGTCAAACTG
ATGCGAAAAGAGAATTTTTGAGAGGGCTTGAATATTTGGCATTTTTGTTG
TTCAGTAAATCACAGTTGAAGTGACATCGTAAGATTTTTTGTCAACATCG
ACAGAGGAGTATCACTTAATGTCGATTTTGAAATCCACAAAGTCTTAAAA
TGTTCTTAACTTATTCTTAAAATTTTGGTCATCGAAGCCTTATGTTCTTA
TATACTTTCTTATTGTAGAAAAAAGTGTATTGACGGAGGTCATCATTTAA
TGTTGATTTTAAAGTAGTTCTGGATTTGAATATGTCAGGTCAAAAAATAT
TTTCTTGTGTTAGTCACCTTGGAAAACTTCGTCGGGGAAAATTTTCGTCG
GTGAAAATTCTCGTCGGGGAAAAATTCGTCACTTGCTGGTAGTTGGTAAA
CGCATTAAGGCCGGGGAAAATATTCGTCACTTGTCCAAAATTTTGTCACT
TTTCCCCGACGAAGTTTTCCCCGATAAGGTACACAAAAATGATAAAACAC
ATATTTTTGACTCTTGTTAGCACCAAAAGCGCCAAGTATGATATTACGGA
CGGCCTCATCTGACCGAGACCACACACAGAGTATATTATGCAAAGTAGTT
TATCTTAAGTGCCCCGACTTTTGATAAACACGTAGCAGGGCATTACCAAA
ACTTCCGGCCTTCATAAAGCATCAGTCAGAATAGAAAATCGAGGAAAAAG
TGCTTTAAATTTGAGATATAAATAGGTCTTAAAGTTTAGCTTTAAGCTGA
ACCGGATAAATTCTGTATAATTTGCCGATGCACGTTTTTTTATAAGAGTA
AACTATAGAGAACATGAGGCTTCGATTGCCAAAATGTCAAAAACAATATT
AAGGACATTTTAAGGCTTCCCGGACATTAAAACACCCGAAAATGGATAAA
AATACTCACAAAATGAACAAGGCTAGAATATTTTAAAGCCTATAAAACTT
CAAAAAGTTAAGAACACCCAAAGGCTTCGAAAATGTGGATGTTCTTATAA
AAGAAAGCATAAACGATGACACGATTACGCGTGCCTTAAAAATGGATGAT
TTTTCAGACTATAGGTAACACAAAGAAGCGCATTGCATCAAATGATGTAC
CCTACAGTTTAATTCAAGCTACCCTGCCTTTTTAAAGATCTTTGTCGGAA
AAACAAAATACACTGAACACTCGCTTATTCGAACTTTCTATAATTCGAAT
CTCTCTGTTATTCGAGCTGATTCTCATCAAAGGATAAAACATTTTAAATA
CTCATTATAATTCGAATCTTTCTCTAATTCGAAAGAAAAATTTTTTCCCC
TTGAAGATCGAATTAGAGAGAAAGCTAACTGTGACAAGATTTTGATATTT
TAAAAACACAGACTTCTCAAAATGTATACCTTAAATGAAGAAATTTTGGC
GGAAAGAAAATTTGGCGGATTTGGCGGATTTGGCCAGAATCCGCCAAATT
AAGTTCCCGCCAAAATTTATTTTTTCCGCCATCCGCCGAATTAAATTCCC
GCCAAATTAAACTTTTTTGAAAATATGATCTCTTTTAAGGTGTTTTTGCA
TTTTTTTTGCTGTTTTTACGCCATTTTAAGGATAAAATTTTCAGCAAACG
CCAAATTAAATTCCCGCCAAATTAAACTTTTTTGAAAATATGATCTCTTT
TAAGGTGTTTTTGCATTTTTTTTGCTGTTTTTACGCCATTTTAAGGATAA
AATTTTCAGCAAACGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCGT
CCATCCGCCAAATTAAATTTCATCTAAAAAACTTTTTCGGCCATCCGCCA
AATTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTATATGGAAAGGGCTC
ATGTATTATTCATCGGTTTATCGAGATTTAATTAAAATGACGTCATTTCT
CATCAGATTAAACTGTTATTTTTTCGTAAAAATTAAATTTGAGATGTTTT
TCATATGCGGAAGGAACAGGAGTGAAAATCATTTATTATGTGAGAAATAA
AATTCTTTAAAATCAAATTTTCGTCTTTATCTAGTTTTAATTTTTTTCAA
GGTCCTAGATGTTAATGTTTGGTTGTGTGTTGCCAAGGTAACAAAATCAG
AATGTCTGATTTTTTTTAGACGTAACGGGACAGTATTTTAACACAAGAAA
AAAAATCTTATTTCTTATTGTCAGAAATGTCTTTTTAAATTATAACAAAA
ATAAAACAAAATCAGCTTAAATCGTTTTTAATCTTATTGCAGTTGATTTA
AATTTTCTGTCAAAATTCTTTGATAGACAACTGGGTAGGTCCTATAAGCA
ATGCTTTGAAAGCACAAAGTTACGACACAACAACCTTAAGATTTATTAAA
TTTTCTATCTGTTTTAGCACACATTTAAATGGTCAATATTTCCACAATTT
TCATGCTTTTCGGTAACCGGAAAATTAGGATGAAATTGGGCGATACTGTG
CCATAGCTTAGGGCCCAAGCATTGATTTCAAAGACCCGAAGGTGCTAGAT
CCGAAACCACAGATTTATCAAGCCCAAATGACTAGATGGCGTGCTTTGGC
TGAAAAGTGTGCCGTATCTCGTTAGGAAATCCTACCTAGATCACGTGACA
TTACAATTTCAGAGCTTGACCAATCAGAAGATTCGCGGGTTTATGAAAAC
AATAGCAACAGTATCTTTCGCAATATTTTTTTTGCCTGTGATGGCTTAAA
GCACGACATCTAGCCCTTTGGGCTCGCACAAAACGCGAGAAGAGTAGCGG
GTGTATACGAAAGATTTCGACACCAGGAAACCTGTCTGTGGGTAATAGCC
GTTTAAAGAAATCAAGTGAAAACTATGAATCTGTGTCCAAAACTCCTGGA
TGGGAAATTCAGAACAAGTGACCCGCGTGTTTTTCAAATAAAATTTCTAA
ATGCGGGTCAAACTTAATGCTTTACTTTTTCTTGATTCCTCTTTAGCCTA
GCGCTTCGGGGCTTCAAACTCAAAGGGCCAAAGTTGCTTATATAAATTTA
TACTTTGATTTTTTGTTATGGTTTGATGGAATTTCATACTGTCAATCATC
CCAAGTATAATCAAATTAAAGTATTAAATGTTATTGGAAATTGCATTACC
GGTTTGAGAATGTTTTGACTTTGCTTGACGCTCTCTTAAACTTGTTCTTA
ATATTTTGGCCATCAAAGCCTTATTTGGCTTCTGCTCATCCTCTAGCGAA
AAAAAAGTTTCTTATATAGGAAGAACAGTCGACGCTCTCTAATTCGATTT
TCAAGGGGAATCTGATTTTCATCGAATAAGGGAGCGTAATTTATAAGAGT
TTTTCGTTGACAGGGACTTCCTATATTCTCGAATAATACATAGGGCGTAT
CGAATAGTAGAACGTCGAATTGGAGAGCGTCGACTGCATATCCATAGGGG
TCTGTGATTCAGACTAAAGCCTTGTGTTTTTTATAGTTTATTCTTATAAA
AAACGTGTTTTCCTGAAATTCACGCCCAACTCGTCATCATTTGACATTTT
TCTTTTCAGCTTATTTTGGCAAATACGGGGAACTTTTTTCCCGATATTAA
AAAAATCGGGGAAAATTTCTGCTTAAATTAAAATAAATTGTATGTTTTAA
TTTCAGCGTATTTCGGCAAATACTTGAACAACTACGATGGTGGGCGAGTG
CCGCCCGGTTGGGACCACTGGAACGCGTTGCGTGGCAACAGTCGTTTCTA
TAACTACACACTCAATATCAACGGAAAATTGAAGAGGCATAATCACGAGT
ATAAGAAAGATTACTTCACGAATGTCATCACAGATCAAAGCACGCATGGA
CTATTTCACAAAACATTCCCTCAAAGCCAACGATAAACCTTTATTCATGG
TTGTCTCACATTCGGCCCCTCATGGTCCAGAAGACGGGGCCCCGCACCAT
TATGACAAATTCCCCGACGCCAAAGCACCAAGGTAAATTATTATTTTTTA
ATTAATGCTCTCTATTTCGACCACCAGATTTTGATTGGGGTCAAATCTGA
CGTCCTTGAATTAATGTTCTTAGCTTTCTCGGAAACTTCAAGCCCACGTT
AATATACCAAGCGAGTTGATGAGCGATTTCAGTTTTTTTAATGAGCAAAC
TTCGAACAAATCCGTGAATTTACGGTAATACTTTTTAACGAAAATTGTAT
TCAAAATTTGGGAATAAAATAGTAATTTTATTACAATTTATAAAAACATG
GTGCCCGTTTGCCGAAAAACCAAGAATAAACAAGGAAAGTCCGAGCAGAC
ATGGCATCTTGATAAAATGTTGATGAGACTATTAAAACACCCCTGTGTCA
CAGACCCTGTCACAGAATTTTGTTAAGGCATGCTCCTGATGAGGACAACA
AATACGATTAGTCTTCAATAACACCGAGAGAAACTTCCGTTGAAGATGAA
ATTCCACCATACTATAGCTTAATCCTTTAAATGCTCAATTAATCAATGCT
TATTCGTTCATACCAATACCATAAATAGAAAAACTGAAAAACATCAAAAA
CCAATATCCGTTGCGAGAAATTTCTTCAAAAGGCTTCCCAATTTTTTGGA
ATTTAAAATCAAACGCGCCGTAATGACATTAATTTCCACTACTTTAAACA
AATTATTTCTTATTAGAGCGCTGTTTTGAGTAATTCATTACAGCCTCTAT
TTCCTGAATGACGTCATTGTGTTCAATTTGAACGACCAATCAAATTCAAG
TGTTGCCCAGACTTCCGCTTTAGATTAAGGAAACTCATTAAAATCATGTT
TTAATCATGTTACTAGCTAATAATTTTTCAAAAACGTCAAAAAACGTTAA
AAAATAAAAGCACGACTTTTTTGTCGCACAAAACACGCAAAATAAAAAAA
AGATTTGCCGAGCTTTATAATTGTATAGGGTGAATTAAAAAATATATTAT
ATGTCAACTCCTTTTGAGTGATAAAAAAATAATGATAAAAAATCTAAATT
TGACCTGCTTTCTGTAGGACTGTTAATTCGCTTAGGACCTTACTTTGGTT
ATTAGAATAACGGTAAACTAGTCGTTGAAAACAGACCCATATACAAAAAA
TTCAAGCCCCAAATAAAAAGAATCGAAGGGGTGAAGTTGCGTCTCTTTTC
TGAATTTCAACGACTAGAAGCTACTTCCCTCAAAAAACGTTGTTTAATTT
TACAACTTTTTTTAGGTTTTTGAGAATCCATACAACTTTTTTGACAAAAT
GATATTTCATAGTAACATTGAACATGGGAACATATGAATAAATGAGCATG
TCTAAAAACGCAATAAACAGAACGAAAAATAAATGCAATCCTGCACGGGT
CAGACATACAGAAATCTGTTTGTCTCTCCTTACGATTTTAGGTGAAGAAA
AAAAGGCGTTGGAAGTAGCTTCTAGTCGGTTATTTTCCTTTTCTCTCACG
CGCGCTGAATATTTAATTAGTGTTTACATTATTTGATTGACAGTTTTATT
ATAAGGTTATAAGTAATAACCGACTAGTTACTAGTCTATAGGACTGTTAA
TTCGCTTAGGACCTTACTTTGGTTATTAGAATAACGGGGCTCAAAAAATC
ATCAAGAATAAGAACAATTTAAGGACAATACCAAGCCTGGAATTGTTTAA
TTTCAATCAATCTAAGAGGAGGCAAAGAAGCAATAATACAAAGCCTAAAA
CCTTAAAAATACTAAAACGTTGTCCCTGAAAATGAGAACAAGATCAGAAC
AATTTCAAGCTTAAAGTATCATATAAAAAAGAAACAAAATAAAAACAGAG
GGCCTCAACAAAATTTAACATGTTCATTTAAAAAGAACAAGAAGCCCGTT
GGGCGTGAAGGCCCAGCGAAAAGTAACGTGTTGAAATCGAGCGTACAAAA
CAGCAAATGTATGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAT
AAGCATATGTTTTTTGGGAAACAAGCTCAGTTATGCTTAGAGATATTTTA
GACTCAGGCTTGAAGTATGTTTATCATATGCTTATTTTTCCAAAAAATTC
GAGTCTCCAATTTTTCCAAAATCTGTCATTGCTATACATGAGGATAGGGA
AATAAGTAATGACACTAAGATTTGTCATTACGTTTTGCAATTGAAAAACA
AATTTTCACTTACACACCTCAAAAGCAAGCTCAGTAATATGCTTGTATTA
TGCTTATTTTTTAGACAAATTTAGGTCTTGGTATGCTTATAAACGTTATG
CTTATAAAAAAACATGTAATACAGCAGAATTAGGACAAAAGAGGGAACTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTTTTACCCAATTTTTGCCTTTACATTTTTGCCTGTAACGTCAGTCTTTG
GCCAATAAAATATTTTACCAGGCCTTAGCAGCAGACCCCCCTCGCGAAAA
TGTCTTCAGCTACATTCAACTTTCCAATAAAATTCTAGCCTGGGTATCCA
GACTCAAAATTTCAGAAAAAAACAACAATACAAAGTTTCTAAAGTTTCGG
TGTAACTAAAAAAGTCGGGTACAGTTTGTTTGATACTGCCTGTGAGTGAA
CCCTTGTTGACAGACTATCAAAACATCAGCCACATTTTATAAAGGCTACT
TTCCAGCAGCCATTTTGTTTAGAAATGAACCTGTGTTTTCATTTTGTTTA
TCTTTTTTCACAAGGTCAGCTTTTTCCATAAATTATGCGCACCCATAGAA
AAACTGGAAAAATATAAAAAAATCCCGCAAATATTCTGCTTAGTGAGTGG
GCGCTTTTTAACGAATAAGGTGCACTCACCTGCAATCACATATGCAGGGA
GAAATATCCCTGCAGGCATGTTAATTGGACCAGACGGTAAACCAGAAACT
AGACGGTGAAATAGTTTACGGTCTGCATATCCAGGCTAATAAAATTAATG
TGGTTAATGTTCGAGTTAACAATTAATGTGACAGATCCAGAAATGACCAT
TTTCACTGTTCATGCATATTGCAACCATGAAAAATGTTCCAATCTAGTTC
AAATTTACCCATGAGATGCATTTAAGTGTTCATTAACAGATTCCAGAATC
AGTTTATATACTTCATACTTTAAATAATTATGTGATCGATGTGAGTCGAG
TTTGAAACCGACCGACCGTTTTAATGCGACAGATCCAGAAATTACCATTT
TATTTAATGTGTAGAATCATGAAAAAATTCCCAATCTTGTTAGTCTCCAT
TAACATATTCCATAATCAGCTTATTTGAAATAATTCTGTGTCGAGTTTGA
AAAATCAAGCCACCGCACCTTTCGTCAATCGAGACAGCATCCAGAAAAAA
TAATTTTCACGCACGCGTAGCATCATGGAAAAAGTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
AGTGATTTAAGGTAGAATTTCACTCATAAAACTTTATGAAAACTTGAGCA
AAGACTATAAGATATGGCAGAATGTTGAAAAAGGTTTATAAAGAAAAACC
TTCACAAAATTTCTTTGATTTGAAAATCTCTTGACCACTAAAAGCAAAGA
AAATGTTCAAGAAAGTATGAATCAACCTCCTCCAGTCCTCGCTTCGACCG
CCATCTTGTTTTGTTTTGAAAATTGTTTTGAAGGAGCGCGGAATCAGAAA
ATATATCTTTTATAGCCAGTATCCAACTTTAGCAAGCTTTTCCCTATCCA
GACGGCAAAATGTGTGGTACTGGTTTTAAGCGCCGTTTCTACCAAAACGG
ACGGACAGACACACACACACGTACGAACAGAACGTTGCAAATGAAAGGCC
CACTCGCTTAGCGCTGGGCCAATAAGAGTTTTAAACATTTGCCTAAAACT
ACGTAATTTTATTTTTACAGACACTCGTTTAAAAAGTTATGGAATACAAA
AATATCAGCTGGGTTCTTCTCGCCTATTTCCGAGTTTCAAACGCAAAGGT
CTTAAAAATACTAGGTAGAGCTTTTTTACAAACTAGAGCCCTTGAAGCAA
AATAATATCTTAAAATAATGGTTGTTTTTACTGCTGAACCATGAAATATA
AAGGCTTAAATAGGGTAAGAGAAACTCAACATGTCCAATATTTATAATAT
ATATCTAGTGGTTTAGAGAGGCCAAAGTTATCTTAATGGGCCATTCCATT
TTATATCAATAAAGGGATGGACGAACATTTCCAGGGTGTAATTTGAGAAA
AATTTACAGGGGGTCTAAAAGAATGTTTTTTTCATTTTTCCTTTAAGGTA
TGAAAAGAATTTTTTCAAAGGCTTTTTGCGAATTTTTCCATTTTCCAGGA
GGTATCCACACATCTCCAAGAAATATTTTTTGATTTCAAAAGGTTCGTCC
ACCCCCCTGTATGGAAATTTAATGGAATGGCCCAATACGCAATGATGAAT
CATCACAAATCATTTTCTAATAATAGAGAGGAAGTCATTTCCTAAATTAA
ATTTGTAATATTTTTTTCCTTTTTTAAACGACATTCCTTATTCTCTCAAA
AATATTATTTAATGCACGAACGTTTCACGAAATTATCTTGAGGACGTTGA
GGTTTCCGTTATACGTCTGACTGTCTGAACGGGCGGACAGACGGGCGTGC
GGGCGTCAAATTTGATCAATCAAGTATTCGAATTCTTAAATAATTAGAAA
TTTTATTGATAACTTATAACCCATTTCATTCCAAATAACCAGGTTTTGAA
GCATACTCTCTATTCTTTACCTGTATTTCAGGCATCCTAACTACAATTTC
ACTTCACTCGATAAACATTGGATCATTCGAAACACGCCGCCTCTAAATAA
TGTGACGTCACAATTCACCGATGTTCTACATCGTAAACGGCTGATCACCC
TTCTCGCTTTGGACGATGCGATCGAAAACCTGTTCATCATGTTAATGAAA
ACAGGACAACTACACAACACTTATGTGTTTTTCTCATCTGACCATGGATA
TCACCTTGGTCAGTTTAACCAAGTGAAAGGGAAATCACAGCCGTACGAAT
CCGATATTCGAATACCATTGTACATGCGAGGACCGAAAATTCCCAAGGGA
GAGGTGTAAGTTTATTTACGTATTTTAGAGTAAGATTTCCCAGATGAGAT
GAAGTTTTTATAAGATACTTTAATAATTGGTCATTTGAAGTAATCAAAAT
AACGCTTTCCTTAGAAAAAGTAAAAAAGTTGTTTTATTATTGGTTAACGA
CCAACCAAATCAAATAAGAGCTTGTAAAAACTCCATCTCGTCCCAGATTT
CTCTTCTAGAACTAAGATTCCACTGGCTTTCCCGGGATAGCTGGCATAAG
ATCAGACATTTTTTTCTAAAAGTACGGAAAATCTTGTGTTGAGGGAGAAA
ACTGCCTAACTTTCCGAAGCTTATTTTTCAACTTCCTAGAATCTGTTTTT
TTTACCGCTAGAAAAGTGGAAGTAGAATCCTAACCCAAGCGACGGTATTG
TTCTATGTCGAAAATGTTCAAAAGGTACCTAAAGTTGTCAACTGCGCTGA
TTTAAATTGAGAGGTTTGGGATCGTAAATCCTCGGCGTAATCAAAAATTT
TTTTAATATTTGGGCCAAAACACGAATTTTAAATGGTCTCAATTTCGAAT
CTTGAATCAAGCTAACACTATAAGGCCGAAGCGAGTTATTCTTACGAAAT
CAGAATTGTCATTAAACATGTTCTTTTCCAAAACAGGAGAGAAAAAATTG
CATTAAATATTGATTTGGCGCCGACCTTCTTAGACATTGCAGGCGCCAAA
CCGAACAAAATTATGGACGGAACAAGTTTGATGGATGTGGCCGTCGGAAC
CATTTATAACAGCATCAATGGGTAAGTTTGTTATAAATATATTACTTTCT
TCATAATAACTCTCTTTGTTTCAGTGTCTTGCTTGAATTCACCTTCAAGT
CCAGGACAAACATCTTACACATTTTTATAAGAACATGCAAAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036417XLOC_036417Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057788-exon-scaffold_298-1575043694:325174..325203TCONS_00057788-exon-scaffold_298-1575043694:325174..325203Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1575043694:324370..324905TCONS_00057788-exon-scaffold_298-1575043694:324370..324905Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1575043694:319972..320297TCONS_00057788-exon-scaffold_298-1575043694:319972..320297Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1575043694:312799..313122TCONS_00057788-exon-scaffold_298-1575043694:312799..313122Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1575043694:311909..312167TCONS_00057788-exon-scaffold_298-1575043694:311909..312167Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1510915933:325174..325203TCONS_00057788-exon-scaffold_298-1510915933:325174..325203Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1510915933:324370..324905TCONS_00057788-exon-scaffold_298-1510915933:324370..324905Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1510915933:319972..320297TCONS_00057788-exon-scaffold_298-1510915933:319972..320297Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1510915933:312799..313122TCONS_00057788-exon-scaffold_298-1510915933:312799..313122Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1510915933:311909..312167TCONS_00057788-exon-scaffold_298-1510915933:311909..312167Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1491911889:325174..325203TCONS_00057788-exon-scaffold_298-1491911889:325174..325203Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1491911889:324370..324905TCONS_00057788-exon-scaffold_298-1491911889:324370..324905Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1491911889:319972..320297TCONS_00057788-exon-scaffold_298-1491911889:319972..320297Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1491911889:312799..313122TCONS_00057788-exon-scaffold_298-1491911889:312799..313122Clytia hemisphaericaexon
TCONS_00057788-exon-scaffold_298-1491911889:311909..312167TCONS_00057788-exon-scaffold_298-1491911889:311909..312167Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_298supercontigscaffold_298:311909..325203 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.5255	3.21779	6.19439	6.07346	131.025	92.7943	32.1219	41.6166	17.0485	20.7276	4.85066	8.73784	3.47016	3.80322	13.7932	10.331	19.4882	18.7892	15.1557	15.6787	8.59141	6.84781	25.6099	26.9517	9.03589	10.2941	72.8619	71.1065	36.9586	41.2178
Blast
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BLAST of TCONS_00057788 vs. Swiss-Prot (Human)
Match: SULF2 (Extracellular sulfatase Sulf-2 OS=Homo sapiens GN=SULF2 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.354e-102
Identity = 91/176 (51.70%), Postives = 128/176 (72.73%), Query Frame = 3 
Query:  795 KPLFMVVSHSAPHGPEDGAPHHYDKFPDAKAPRHPNYNFT-SLDKHWIIRNTPPLNNVTSQFTDVLHRKRLITLLALDDAIENLFIMLMKTGQLHNTYVFFSSDHGYHLGQFNQVKGKSQPYESDIRIPLYMRGPKIPKGEVREKIALNIDLAPTFLDIAGAKPNKIMDGTSLMDV 1319
            +P+ MV+SH+APHGPED AP +   FP+A     P+YN+  + DKHWI+R T P+  +  +FT++L RKRL TL+++DD++E ++ ML++TG+L NTY+ +++DHGYH+GQF  VKGKS PYE DIR+P Y+RGP +  G +   I LNIDLAPT LDIAG      MDG S++ +
Sbjct:  214 RPVLMVISHAAPHGPEDSAPQYSRLFPNASQHITPSYNYAPNPDKHWIMRYTGPMKPIHMEFTNMLQRKRLQTLMSVDDSMETIYNMLVETGELDNTYIVYTADHGYHIGQFGLVKGKSMPYEFDIRVPFYVRGPNVEAGCLNPHIVLNIDLAPTILDIAGLDIPADMDGKSILKL 389

HSP 2 Score: 195.282 bits (495), Expect = 1.354e-102
Identity = 88/159 (55.35%), Postives = 111/159 (69.81%), Query Frame = 2 
Query:  278 RPNIIFIMADDLDVTLGSPDVMRKTNVLLRQQGVTFKNAFTTSPLCCPSRSSILTGRYTHNHHVHSNNKNCSGPGWINKEEKETMGVFMQQAGYQTAYFGKYLNNYDGGRVPPGWDHWNALRGNSRFYNYTLNINGKLKRHNHEYKKDYFTNVITDQST 754
            RPNII ++ DD DV LGS  VM KT  ++ Q G  F NAF T+P+CCPSRSSILTG+Y HNH+ ++NN+NCS P W  + E  T  V++   GY+TA+FGKYLN Y+G  VPPGW  W  L  NSRFYNYTL  NG  ++H  +Y KDY T++IT+ S 
Sbjct:   43 RPNIILVLTDDQDVELGSMQVMNKTRRIMEQGGAHFINAFVTTPMCCPSRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTAFFGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVKEKHGSDYSKDYLTDLITNDSV 201
The following BLAST results are available for this feature:
BLAST of TCONS_00057788 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SULF21.354e-10251.70Extracellular sulfatase Sulf-2 OS=Homo sapiens GN=... [more]
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