TCONS_00057751 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057751
Unique NameTCONS_00057751
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3154

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057751 ID=TCONS_00057751|Name=TCONS_00057751|organism=Clytia hemisphaerica|type=transcript|length=3154bp
ACAACAGAATTCGACAAGAACTCCATCGCCAGGGTATCTTTTTGGGCATC
ATTTTCTCTGTTCGTTCATTAAGTTATCTTTAGGTATGCCTACAATGCCA
CTAAGAGAAAGATATTATGAAAATATGGAAGATAGAAGAAAATCAAGAAG
TAGAAGTATTATCGAAAAAGCATATGAAAAGCCATATCAACTAAGATCAA
GTCACAAATATCCAGCTACAAGATCCAGCAAAAGATTGAGAAGAGGTTCC
TCTGGTACAAGAACTTCTCGATATTCAGATGAAAAATGCATTAGATCAAA
GAAGAGAAGCCAACATGATAGTCGGAGAAGCACAGACAGAAAAACATCAA
GAGATCTAAGCTGCAGTAGGACATCCCATTCCACATCTTgcaataacaac
aacaacaacaacactcAAAGACGATGTAGCAAAAAATCTTCACCAACCCG
ACATGATTCAACATCCTCCAAGATAAAAAATGACGAGGAGGGACATCTTG
TTTATAGAGTGGGAGATCGCCTCCACGAACGCAGATGTACTTAAATACCT
TTTAGTTTGTTCGCTTCCCAAAACCATGCTATGCACACAATCTAATCTCA
GGTTTAGTTTAACATCAACAATAAAACGAGTTAGATGACTAATACTAGTC
CCCAATGACCCTCTGACAAGAGGAATCACTCTATTGGCAGCAAAATACAA
GTTGAAAAACCTGTCACTAATCTGCTTGGTCTGAATTGAACTTCATTTAA
AGGTGACAGTGACCAATAGGGGTTTGGATCTCAAATGGGTGGAATCTGGG
CGCTTCTTTTTTGGATATATTTTTATTGTGTTTTCCTTCTTTATTTCAGA
TAAAATATACGGCCTTCTAGGAGAGGGAACATTTGGAAAGGTTTTGGAAT
GTCACGATCGaaaacacGATCGACAGGTAgcaataaaaattataaaaaat
aaaaagaaatatagaGAAGCTGCCAAACTTGAAATTGAAGTGTTCAAGCA
ACTAAGAAAAAATGATCCTGATGGAAAACACAATTGTATCAAATGTTATG
GAACTTTTCGCCATGGTGGTCATGTTTGTTTAATATTTCCAAAACTTGGG
AAAAGTGTCTTTGAATTTATGAAAGACAATGACTACCAACCATACACATT
GAAACAAGTGCAGCATATAGCATATCAACTTCTCGATTCTGTCTGTTtTC
TCCACAAGATCAAATTGACACATACAGATTTGAAACCAGAAAATATGTTA
TTCGTAAATTCATCTTCACGGTCTATATGGAGTGAAAATGCTcgtcaaaa
tataaagattttAGACCATTGTGATGTACAACTGATCGATTTCGGCTCCG
CAACTTTTGAACACGAGCATCACTCAAGAATTGTTTCTACGAGGCATTAC
AGAGCTCCTGAAGTCATACTAGAATTGGGTTGGTCTTATCCTTGTGATGT
GTGGAGTTGCGGATGTATCATCTTTGAATTATACACCGGTGATGCCCTTT
TTCGTACGCACGATAATTTGGAACACTTAGCCATGATGGAGAGAATATTA
GGGAAATTAccaaagaaaatgatgaaagCTTCTGATAAACAAAAATACTT
TCGTGACGGAGTATTGGATTGGGATGAGAAGGACCATAACGGACAATTTG
TCAAAACGAACTGTGTTCCATTGAGAgagACGTTTAACTCGGACGACCGC
CGTGCTACAGAAGAGCTTTATCATCTTGTCGACCGTCTATTAACTTACAC
ACCTGAAGATCGGCTGACGGCAAAAGAAGCTCTCTCTCATCCGTTCTTCA
GTGAGGATATCTCTGCAAGAAAGAAGTGATATCACGTTTTTTAttcacaa
gaaaaatattttcgaatcaCTTTTGTTGTAAAGAATTGTAAATACAGTAT
AGTATGCCTCCCATTCAATTTCTTTTATAGTTGAGTAGCTCACATGcaga
gtacacgttttttttttttataagaacacctaagatttggctgagcctgg
atgtgcttatttttttagcaattttcagcctaaaatgttcttaaatgcgt
tcttaatttttcatcagactactctaaatcgataatatgatacaaaataa
agagcactttaATTTGGcacaatttggacaatatttgactctcgactttt
gaagatccacccctaaattcggttaaaactgcttaaaaagaggaaaaaat
tgtagtttcttgtcatttttTTCCAAACTGAGGCTGGGCATGTTCTTAAc
atgttcttaatttttcgacgaatttcagcctatatgttcttataaactag
gttctaataaaaaaaaaacgtgtaccttggTAGAAGATTTTCTATAGCTT
TGTGGGTTTTGCAGACCTTGCATAAGTGCAACATTCTTGTACGGTTCAGG
TCGAAATAAAACTACAGTTTactttcgctaattcgaactagagcgggaaa
ttttatttgttcgaattacagagagacttgaattatagaaagtattttaa
gaaggTTTCTCCTGTACGGGAACTGGAATTAAGTTCGAACTATCTAGAAA
GATTCGTCAAATGTTAaagacttttcacaaaaaaattttctttcacttGA
AGTGGTCTGACGGTACTTTTTTTCGGTACACGCTGCATATCCTCTTTATT
GTTTCACAACTTCGTTCCCTGTTTATTTTCCTCTAAAGAATcttgcattg
taacacgcatgcgtaatttgtcgttcttttaaaccatatgtagttaattc
ccgtgataaaaaAAAGGAATGAATTCGTAGGGGTGGAAATTTGTCGTTcc
atttgtctatttttagtaaatgtagGATCATTTAGATAAACCCTCTCCTG
CGTCTTATAAGCTTTTTGATACTTACTGATAGCACCAGATAATTCCCTGG
CGTCTATCATCAACGTAAATAAAGCTTGGACTACACGGGAACGAGGTTGA
TTGTTtcataaaagtaaaatatttctttgtcCTCATGTTCCAAGATcctt
ttttaaattatatagaaaacttgtttgtttttataCTACGTTTTTCATAC
TACTATTTTCAATACAATGAAATGAGTGTATTATATTATACATTGTTata
ttgaatgaatgaataattAGTCCAAAATATATTTATCCAAAACAAATCGC
TCGC
Run BLAST on NCBI

transcript from alignment at scaffold_298:348116..360202+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057751 ID=TCONS_00057751|Name=TCONS_00057751|organism=Clytia hemisphaerica|type=transcript|length=12087bp|location=Sequence derived from alignment at scaffold_298:348116..360202+ (Clytia hemisphaerica)
ACAACAGAATTCGACAAGAACTCCATCGCCAGGGTATCTTTTTGGGCATC
ATTTTCTCTGTTCGTTCATTAAGTTATCTTTAGGTATGCCTACAATGCCA
CTAAGAGAAAGATATTATGAAAATATGGAAGATAGAAGAAAATCAAGAAG
TAGAAGTATTATCGAAAAAGCATATGAAAAGCCATATCAACTAAGATCAA
GTCACAAATATCCAGCTACAAGATCCAGCAAAAGATTGAGAAGAGGTTCC
TCTGGTACAAGAACTTCTCGATATTCAGATGAAAAATGCATTAGATCAAA
GGTTGGTATTTAAGTCTTATGTTTTGTTGTTTGATGTTTACTccagcttt
ttctgatttccatGGTCCTTTCCAATAGCAAACATCCTGATCTGGagtaa
agaaaaaggaagaagaacTTCACCGTCTTCCTGTTTAtgattttccacca
ttttttcaTTCACATCATAGcaaaaggttcaatctcaaaacaaaaatgct
ttTCCTGTCATTCCTGTATTTTTTGATGGGATTAACAGTTAGGGGACTCG
TCCATATTCATTTAACAATGCATAACGTCGAATCGACGTTATCCTCTGAG
CCCCGCCCCCACCCCTTCTCCCCCCACAGGTACAGATATTGGCAAGCGAT
GTATGCCAAAAGTTGTCATATTTTCATCAATGTTTTCCCGTCGCAAAGTC
TGTACTTGGTTGTACCCATGcgtgtatgtgttcttttaactaatgacctt
tatttaaaaagaaattaaaagctccaTCCACTTGGCGCTAGGTCCTTGCC
GTGCTTTAGGcgtaccaccttctttgcccACTTGTGCGATGTGGTTAGCT
CGATCacacaaacaatgaaaatatgaagTAAAGTTATCATAgccagttac
atcaaaatgcctcgaaaatgtcaatatgaaaattgcgtaatcagagaaca
tatgtctcgctcattataaaaaggccgagacaaactttcaataattgNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtattca
catactgaatttgaaagatcttctatgtggcgttttttttgcaaacttca
aaaaactgatttttgtcccgcctttgcgggattttagcccaagtgcttga
gtgcagcatagggtacaaagtccaaatatgcgtttcccgtaatttttgta
tgaagagttaggtctatactgactGATGTCAAgcttaacttttgaaaacc
ccccaccccctcaCAACATCAATTTGATGTTTTGcattgtcaaatgaata
tggacggctcccctTAGTCACACTAggtggcaatcacaaatatctttgtt
tcaccgcccgaccgactctcgaaaattgagtagaattgagtcggtgagtc
ggtaaatttgtcagactttttctgtcaatgatgtttcctttgttcaaaat
ttttattattgccaattttttgcgagcgatttctagcgcattcgcagcat
tttgactttgtttatcattacatgcgccattttgggtcGGAGAGGTCACA
CTGTTCAAAGGTCTTGATTTGAAACCACCCATAACACgtggttgttttgg
ctgctgactggctggcagtttcctttAAGAATACACTCCAAAAGGGATGA
TGGATGAtgaaaacccgaaaattttttcgaccgaccgaccaaccgactca
ctttttaggcccaacgaggacgcgaaatgaagatatttgtgattgtaGCC
CTACAAGGCAGGATCTGTTCAGTCAGTAACAATCAACTAATTTGTACAGT
ATGTTCAGTGCCTTATAAACACAGAAATTTCATAATGGTAgcctatctat
ctatctatctatatatttcatactaAAAGGTCCTAGGACCCATTATCCGT
ACatttgtttgtttgaaaaaatgaaatatgaataaataaatcagaataaa
aatgaaatgttaAGAGCAATAAAAACccctaaattaaaaaaactctttGC
TGCAACAAGGTGAAATGAGTGTATTGTATTCACAATTTTGTATACAACCT
TATGTATATGTAACCTTGCTACAGTAAATGTTGGATTCTGAAATAGGGCA
CAgattaattttgatgaattttttatcaatttatcaATTTAAGGGTTTTT
TCATACTTAAAGCTTCTGGAATTTACTCTTTACAGTAGCTCTAAAACATC
TAAAATTACAATAAAGTTTAGAATGTTCTAATTTGAACATCGATGTCCCT
ATAAGGACATCAAAATGGTGACTTGTCTAGACAGTATCCTTATTGGGACA
GTGTCCTAATTAGTCAAATGTTCCTGACTGCTGTTTGAGCgctaaaaaac
aaaatgaaccTTTTGCAAGACAGAATGCCATTTTGACTCAATTAATCAAC
GGTAAAAGCAATatcataagttggtctaatgtcgacattccctcttctaa
tttcaacacccttctttagagataggaataataggaaggttggaatcgct
gatggaaactttctttccttggcAATCAGagtggaaaaaacttttttcta
ttaGTGATCCCAACCTTCCTAATACTCCtatctctaaaaaagggtgtcaa
aattagaagaggggtgTCGGCATTAAACCGAAACTTTCAATCTTCATAAC
TTCTGATAGGAACATTTTGAAGTAtgttcatgctctttccgcttggacca
tcagattttgattatttctGAAAATATGAATCTAATTGaggacgtcatct
ggcaggtgggcATGTGCCATAATTTGGTGATActctttaaaattaagttt
tctcTAAGCATAATCTGTGCCAATTATCCATTCCTTTGTCACCATCTGaa
gttttcttatatttttaagTGCTAACAGACTTCAACTACAGTGGATCTCT
TAAGTTTGAAAGAAAGTAGAAATCTCTGTTGACAAGACTTTAACCTTTAA
TTTAGTCAATTTTGAGGATAAGAATTCTGAATCTGAATGTTAATGTAGGA
AAATTCATGATCATATTCTAAAAATACAGTGTCCTTTGCTGTCTTTGGTC
CTTTAGTGTTTTTCCACCAAAAGAATTTCTTGATTTCAAAATTGCGCTTG
GAGAACATGAATTGAGCTAATAGCCAATGTGGAATCATGTCAGTGAGTTT
CCTATTGTTCTCTCACACTATCTCACAAGTTTACGCATACATTTAACAAA
TTAATGTATGTATGTAAAGCTCCTTCTTTCCACTTGCCTTAAGTAGGGAA
AATTGGCCATGTTTAATCATTCACGCAACTAATCAAAAAACATATATGCA
TTTTTCGTATTATCAGACATGAGAATGCCTGTGTTAGTGTTGCATGTCAT
TGTGTGGTCTATGTATTCTACTATATAATACAGAAGAGAAGCCAACATGA
TAGTCGGAGAAGCACAGACAGAAAAACATCAAGAGATCTAAGCTGCAGTA
GGACATCCCATTCCACATCTTgcaataacaacaacaacaacaacactcAA
AGACGATGTAGCAAAAAATCTTCACCAACCCGACATGATTCAACATCCTC
CAAGATAAAAAATGACGAGGAGGGACATCTTGTTTATAGAGTGGGAGATC
GCCTCCACGAACGCAGATGTACTTAAATACCTTTTAGTTTGTTCGCTTCC
CAAAACCATGCTATGCACACAATCTAATCTCAGGTTTAGTTTAACATCAA
CAATAAAACGAGTTAGATGACTAATACTAGTCCCCAATGACCCTCTGACA
AGAGGAATCACTCTATTGGCAGCAAAATACAAGTTGAAAAACCTGTCACT
AATCTGCTTGGTCTGAATTGAACTTCATTTAAAGGTGACAGTGACCAATA
GGGGTTTGGATCTCAAATGGGTGGAATCTGGGCGCTTCTTTTTTGGATAT
ATTTTTATTGTGTTTTCCTTCTTTATTTCAGATAAAATATACGGCCTTCT
AGGAGAGGGAACATTTGGAAAGGTTTTGGAATGTCACGATCGGTAAGCAT
CATGATTTGTTATTTCCTTCTCAGAAATTTTATAAATGGATATTAAGACT
TCAGGcatcttcttatttttttaatagGGGTTGCATCTTCGGTGGGGGGG
GCTCAATTTGATTGATGTGAGATTTGTCTTTTACataaaatgctcacttt
cagcataaccACTTGTCCAAATTTGCTGAAACTTTGGCTACAAGCTTGTA
TTACCAATACCTAACACTTGTCAATAGCATTTTTTCCAATCACTACAGTA
TCCTAGGGCTGTTTAGGCAAAAAAGGGCAATTCTGGGCCGGTCTGCAAAA
TACACAATACAaacatgtgaaaaaaatttacccTCTGCCCCAAAAGTTCA
TGTCACTAGGAGTTTCCtaacaaaattttatcaaaaaaagttagGCAGGA
GGTCCTTTTTTCGGTATTTTGCAACAATGATGACGCCTCTCCCCCAAGAT
GCTTAAAGGGTTAATCTAAGTAGTAATTGTTGAAAAACCATTTGACAAAC
TATATTGAACTATGCAGATTATTTTCTTAATTCTACAATTattctaactt
ttttttgtagaaaacacGATCGACAGGTAgcaataaaaattataaaaaat
aaaaagaaatatagaGAAGCTGCCAAACTTGAAATTGAAGTGTTCAAGCA
ACTAAGAAAAAATGATCCTGATGGAAAACAGTAAGTCCtgtccatttttg
ttttttttcttccccATGTTTCTTATTATTTCTCAAGTTTTTTACATCTT
TAATGGGGTAAATTCNttttttttttcttccccatgttttttattatttc
tcaAGTTTTAACATCTTTAATGGGGTAAATTCAGAAGAATGTATACTTAC
TGTATTACTTCTATTAAACGCCCCAGATATTATGTCCCTCCTAGAGGGGA
GGCATTTATTTGAGGGGAtgcttattgaaaaaaaattttccagtaaGGGG
CATttaataaatttgataaaggAGAGGGGAcctttattcaaagtaatagg
GTTAGTAGTAACAGAAGTGTTACCATTTATTCTACTAGGTTGTCTTTGTT
ACAAATTGACCCAATTTTCACTCAACTATAATAACCAATAAGTATTTTGT
GATAATTTCAAGTCTGTTGAATACATGACCAGTTTTTTGTAGaggattga
ttgattgattgattgattctttTTTTCTAGCAATTGTATCAAATGTTATG
GAACTTTTCGCCATGGTGGTCATGTTTGTTTAATATTTCCAAAACTTGGG
AAAAGTGTCTTTGAATTTATGGTAGGTTAACTTCACTTACAtagtttgaa
tatatttttttgtttaacaCTAAAGCATACTGCACAGTTCCGTTTCTGAA
GCTTTGTTGTCACTTGAGCATGGGCGGCATTTCTCTGTAAACCCTAAGGA
ATCGTTACTGGTTAATTTTTGCATAGAGATTTATTTATATTCAATGATAA
TGTTAATGGGGCATAATGTAATCATTTCctaaagaaaatcaaatccCCAT
GTTCTAAATAAATTTCTATACAATAGAAACAAGTAAGAAGCTTTGAttta
atgttttgaatttttaaaaacatcttgTTTACAATTTCTTTAGAAAGACA
ATGACTACCAACCATACACATTGAAACAAGTGCAGCATATAGCATATCAA
CTTCTCGATTCTGTCTGTTGTAAGTTTTCTTCAAGGCTTGCATCTAAATC
TTTCTCTTGAAAGTATTACATTTCAATACGTTTAGTGTTCGTTTTTTTCA
AGTAGCTATCATTCCATCAATTAGGAGTGCtagtttttaaataatttgCA
ATTGATTTTGAAAACCTGAAAACTATAACAGTACTTTTAATTTTGGTAAT
aagaattttacaaaattgctgAAAGTTattatgtttattttttcagtTCT
CCACAAGATCAAATTGACACATACAGATTTGAAACCAGAAAATATGTTAT
TCGTAAATTCATCTTCACGGTCTATATGGAGTGAAAATGCTGTAAGTAGG
GGATGATAGAATTTGAAACAATTACCAAGCTTCGAGATTAGTGTGAAAAT
AATGTGGGCTTGGTGTCACCTAATCATCCCTATTCAAAATCTAccgagtt
tttttgtttttttatgcaTTCTTAGCCTAAAAAAGTAAAAGtcattttta
gtaaaaaaaataagatttttgtttgttttacgAACCTTGATTAAGACCTA
TGGGAGAAGGCGAATGGTCATTGAGACTTGGAGGGATAGTGTTCTCAACA
TCAAGATACTAGATAGTAGACAATACTTCATTTCCTGCAAACCtctgaaa
aaatcttcaattgaaatatttttcttctttcttcagcgtcaaaatataaa
gattttAGACCATTGTGATGTACAACTGATCGATTTCGGCTCCGCAACTT
TTGAACACGAGCATCACTCAAGAATTGTTTCTACGAGGCATTACAGAGCT
CCTGAAGTCATACTAGGTAGGTTCATACAGTCTCacagtacacttttttt
ataagcaagtgtctgcctcTTGGTCAGGCTCAAGCATGCTTAAGCTTTCA
AAACATCCAGGCATAgcatatgcttattatatgcttataaattaTTATGC
TCTTGATTCACCCAAcccaattttttataaaattttgctaACACTCGATT
CAAattaggaaatctgcaaatctgagcctttgTATGCTtttaagcgttat
gcttataataaaTATATGTATGTGATTATCATATTACAGACTTGTGGCTT
TAAATTTTTCCTGATGCTTTCTTTCCCAAAACTTGAAAATAGTGTTATTT
GTATTAGACTGGGTTAGCCTGGTTTTTACTTAATCTTATGTATGAACATG
GGAATTGAAGTCATTCTCTTTTATTATCGACCGATGTCGAGCTTTATGCA
AGCTAATGGTGTTTGATTTTAAGATATTACCATTATCACAGGTTCAATCA
TATGCGAACGTACTACCATTCCAAACATTCTTTCTACCCTTCTTTAGAAT
TGGGTTGGTCTTATCCTTGTGATGTGTGGAGTTGCGGATGTATCATCTTT
GAATTATACACCGGTGATGCCCTTTTTCGTGTAAGTTCCTTCATACAGGA
GACGTTAgattgtatttattttcaaatttaattcttaTTTCGAAATCTAG
TTCTATCTATCTCTAATTTTCTTAGATTTGTATCGTGAGAAATTGTCTTA
GTTCTACTCGGTCAAATTGGGTggttgggcttttccagaaaaatatttaa
tatgGGGGGGTGGAGaatattaactttttttggaaatttacaatcgaaat
tacccctaaacaaagcaagtttacccccccccccgNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTGGTGTGGCCTCTTTCCTCCAAAGA
ATCActtagtaggcatgatgtcttgtactaactgcttgacccccccccct
gcttaaaGTGTTAAAAAGGTTAAGATGATTTGACCCTTTGTTATTTGTAA
CGTTTTCCTGacttttcaaagagaaaataggATTTGTTGGTCAGAGACCA
ACAAAAAGtattaaattctaaaaatgaaacataaatatttttacaatacA
AATCATCTATCCACAGACATGtgtttcgtccttcccaggactcatcAGTG
CGGCTCGGGTAAGCGTGCATAGACTGActgttgtcaccagagtgctcaGA
GCACTAAGTGTTGAGCTTcgcataatcgcttgtggtgaaCGGAGAAGCAG
AGCTTGCTCCTCAAAACAAATCATACATTTTTCTGTTCCTCTTTTAGACG
CACGATAATTTGGAACACTTAGCCATGATGGAGAGAATATTAGGGAAATT
AccaaagaaaatgatgaaagCTTCTGAGTGAGTGAATCTCATGTAATTTT
ACGTTTACGTGAAGGCCGACATCTTCTTCCATTTACTTACACAGCATATT
TAAACAAAAGGAAAAGAACAGCTCTCTCCCTTTTCGGGAGAATATGAAAC
ATTatgagaaattctattgtttttgttTCGTCAGCATAGAGAAATATTAT
AAACATCGAGTCTAAGGCAAATACGTACATGCGGTTTCTCAACGGATTCA
TTATGCTTAATTTCCATACTAAAAATTACAGTCTTGtcgttttattgatt
tttgtcATATCTATGTAAATTTTTATTCTTGTCCGTATAAAAGTTTTGGG
GTACTGTAATTTATAAGGTCATGAGctgtttttctaattttgtcgtttat
tttctcgattttttttcaGTAAACAAAAATACTTTCGTGACGGAGTATTG
GATTGGGATGAGAAGGACCATAACGGACAATTTGTCAAAACGAACTGTGT
TCCATTGAGAGTAAGTTTTTCAAATCCTTAACTgctctttttgctttttt
ttgcaAGAGAAACCTTTTTTCAATAGACTTGCTTCGATTTACTTTAAGGG
ACTGCGTAAGATATTacctttttagaaattttcaataacacgttttttat
aagaacagaccttataatgtaagaacataagactgTAAAATGACCAAAAT
TAACACGAACaagttttaagaacattttcttataatttcttaggaaatcg
cACAAAATATGGTGAAGATgataacattttaaaaacatttttaggcttaa
cattttcattttctagaaGAATCTAACCCTGATCAAATACAATATACAGT
GAATGTTTTGTAGTATCGTTGGGTTTTCAAATTGATCATGAAAAAGCGAA
AATATCCAGTTTTCCTTCAGTTGGAGTCAATTGTATAAAAtctctatttt
ttttctcaggagACGTTTAACTCGGACGACCGCCGTGCTACAGAAGAGCT
TTATCATCTTGTCGACCGTCTATTAACTTACACACCTGAAGATCGGCTGA
CGGCAAAAGAAGCTCTCTCTCATCCGTTCTTCAGTGAGGATATCTCTGCA
AGAAAGAAGTGATATCACGTTTTTTAttcacaagaaaaatattttcgaat
caCTTTTGTTGTAAAGAATTGTAAATACAGTATAGTATGCCTCCCATTCA
ATTTCTTTTATAGTTGAGTAGCTCACATGcagagtacacgtttttttttt
ttataagaacacctaagatttggctgagcctggatgtgcttattttttta
gcaattttcagcctaaaatgttcttaaatgcgttcttaatttttcatcag
actactctaaatcgataatatgatacaaaataaagagcactttaATTTGG
cacaatttggacaatatttgactctcgacttttgaagatccacccctaaa
ttcggttaaaactgcttaaaaagaggaaaaaattgtagtttcttgtcatt
tttTTCCAAACTGAGGCTGGGCATGTTCTTAAcatgttcttaatttttcg
acgaatttcagcctatatgttcttataaactaggttctaataaaaaaaaa
acgtgtaccttggTAGAAGATTTTCTATAGCTTTGTGGGTTTTGCAGACC
TTGCATAAGTGCAACATTCTTGTACGGTTCAGGTCGAAATAAAACTACAG
TTTactttcgctaattcgaactagagcgggaaattttatttgttcgaatt
acagagagacttgaattatagaaagtattttaagaaggTTTCTCCTGTAC
GGGAACTGGAATTAAGTTCGAACTATCTAGAAAGATTCGTCAAATGTTAa
agacttttcacaaaaaaattttctttcacttGAAGTGGTCTGACGGTACT
TTTTTTCGGTACACGCTGCATATCCTCTTTATTGTTTCACAACTTCGTTC
CCTGTTTATTTTCCTCTAAAGAATcttgcattgtaacacgcatgcgtaat
ttgtcgttcttttaaaccatatgtagttaattcccgtgataaaaaAAAGG
AATGAATTCGTAGGGGTGGAAATTTGTCGTTccatttgtctatttttagt
aaatgtagGATCATTTAGATAAACCCTCTCCTGCGTCTTATAAGCTTTTT
GATACTTACTGATAGCACCAGATAATTCCCTGGCGTCTATCATCAACGTA
AATAAAGCTTGGACTACACGGGAACGAGGTTGATTGTTtcataaaagtaa
aatatttctttgtcCTCATGTTCCAAGATccttttttaaattatatagaa
aacttgtttgtttttataCTACGTTTTTCATACTACTATTTTCAATACAA
TGAAATGAGTGTATTATATTATACATTGTTatattgaatgaatgaataat
tAGTCCAAAATATATTTATCCAAAACAAATCGCTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036407XLOC_036407Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057751-exon-scaffold_298-1491911889:348116..348416TCONS_00057751-exon-scaffold_298-1491911889:348116..348416Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:348116..348416TCONS_00057751-exon-scaffold_298-1510915933:348116..348416Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:348116..348416TCONS_00057751-exon-scaffold_298-1575043694:348116..348416Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:352349..352957TCONS_00057751-exon-scaffold_298-1491911889:352349..352957Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:352349..352957TCONS_00057751-exon-scaffold_298-1510915933:352349..352957Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:352349..352957TCONS_00057751-exon-scaffold_298-1575043694:352349..352957Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:353526..353645TCONS_00057751-exon-scaffold_298-1491911889:353526..353645Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:353526..353645TCONS_00057751-exon-scaffold_298-1510915933:353526..353645Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:353526..353645TCONS_00057751-exon-scaffold_298-1575043694:353526..353645Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:354146..354236TCONS_00057751-exon-scaffold_298-1491911889:354146..354236Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:354146..354236TCONS_00057751-exon-scaffold_298-1510915933:354146..354236Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:354146..354236TCONS_00057751-exon-scaffold_298-1575043694:354146..354236Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:354559..354634TCONS_00057751-exon-scaffold_298-1491911889:354559..354634Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:354559..354634TCONS_00057751-exon-scaffold_298-1510915933:354559..354634Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:354559..354634TCONS_00057751-exon-scaffold_298-1575043694:354559..354634Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:354862..354956TCONS_00057751-exon-scaffold_298-1491911889:354862..354956Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:354862..354956TCONS_00057751-exon-scaffold_298-1510915933:354862..354956Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:354862..354956TCONS_00057751-exon-scaffold_298-1575043694:354862..354956Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:355302..355431TCONS_00057751-exon-scaffold_298-1491911889:355302..355431Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:355302..355431TCONS_00057751-exon-scaffold_298-1510915933:355302..355431Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:355302..355431TCONS_00057751-exon-scaffold_298-1575043694:355302..355431Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:355963..356045TCONS_00057751-exon-scaffold_298-1491911889:355963..356045Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:355963..356045TCONS_00057751-exon-scaffold_298-1510915933:355963..356045Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:355963..356045TCONS_00057751-exon-scaffold_298-1575043694:355963..356045Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:357713..357792TCONS_00057751-exon-scaffold_298-1491911889:357713..357792Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:357713..357792TCONS_00057751-exon-scaffold_298-1510915933:357713..357792Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:357713..357792TCONS_00057751-exon-scaffold_298-1575043694:357713..357792Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:358185..358275TCONS_00057751-exon-scaffold_298-1491911889:358185..358275Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:358185..358275TCONS_00057751-exon-scaffold_298-1510915933:358185..358275Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:358185..358275TCONS_00057751-exon-scaffold_298-1575043694:358185..358275Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1491911889:358725..360202TCONS_00057751-exon-scaffold_298-1491911889:358725..360202Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1510915933:358725..360202TCONS_00057751-exon-scaffold_298-1510915933:358725..360202Clytia hemisphaericaexon
TCONS_00057751-exon-scaffold_298-1575043694:358725..360202TCONS_00057751-exon-scaffold_298-1575043694:358725..360202Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_298supercontigscaffold_298:348116..360202 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.767478	1.09202	0.955311	0.586826	3.04945	3.10369	3.22376	3.31571	0.974278	1.07111	1.95592	0.79624	5.26865	5.75217	6.05041	5.41054	7.09623	11.7744	2.91321	3.32086	0.847094	0.314877	3.66879	2.81786	7.77477	8.83671	3.88038	5.88702	4.81988	3.84876
Blast
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BLAST of TCONS_00057751 vs. Swiss-Prot (Human)
Match: CLK2 (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 2.729e-113
Identity = 174/318 (54.72%), Postives = 231/318 (72.64%), Query Frame = 3 
Query:  852 KIYGLLGEGTFGKVLECHD-RKHDRQVAIKIIKNKKKYREAAKLEIEVFKQLRKNDPDGKHNCIKCYGTFRHGGHVCLIFPKLGKSVFEFMKDNDYQPYTLKQVQHIAYQLLDSVCFLHKIKLTHTDLKPENMLFVNSSSRSIWSENARQNIKILDHCDVQLIDFGSATFEHEHHSRIVSTRHYRAPEVILELGWSYPCDVWSCGCIIFELYTGDALFRTHDNLEHLAMMERILGKLPKKMMKASDKQKYFRDGVLDWDEKDHNGQFVKTNCVPLRETFNSDDRRATEELYHLVDRLLTYTPEDRLTAKEALSHPFFS 1802
            +I   LGEGTFG+V++C D R+   +VA+KIIKN +KY+EAA+LEI V +++ + DPD K+ C++ +  F + GH+C+ F  LG S F+F+KDN+Y PY + QV+H+A+QL  +V FLH  KLTHTDLKPEN+LFVNS     ++   +++ + +    V+++DFGSATF+HEHHS IVSTRHYRAPEVILELGWS PCDVWS GCIIFE Y G  LF+THDN EHLAMMERILG +P +M++ + KQKYF  G LDWDE    G++V+ NC PLR    S+      +L+ L++ +L Y P  RLT  EAL HPFF+
Sbjct:  164 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEH-HQLFDLIESMLEYEPAKRLTLGEALQHPFFA 480
The following BLAST results are available for this feature:
BLAST of TCONS_00057751 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLK22.729e-11354.72Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
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