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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057713 ID=TCONS_00057713|Name=TCONS_00057713|organism=Clytia hemisphaerica|type=transcript|length=1048bp
atgctttattcaataattaaaaactctaaaaTCAAAAGACTAAGATCAAA
AAGAGCTAGATTTAGGCAGATTCGAGAAGTCTAGTAGTATATTGAAGCTG
AATGTGATTTCTCTGGATTTAACTAAAGATATGAATTGTTATAGGCATAC
TATAAATAAGTATAGATTATATGAAAaaggtataaaataaaatatatatt
tataaaaaatatacaacttGGTATTAGTAAAAACTTCGTTCTAAAAATCA
GAGGATTAATATTTATGACTAAAGAATAATAAGGATTAGAATAGAGTCGC
ACAGAACGATGCATGGCGAGAAAAACTAAAAGTATTtcaaacaagaaaga
aaaagaccTAAATTTGGCTATAAAGTAACTCTTAAAATTCGTTAAAATTT
AGGGATAATAATTTCTCTTCAAATTTATCACATTCTACAATATTCACTAG
AGATTTCATCGGCCCAAAAGTTTGCGCCGCGGGCAGAAAAACGAAAGAAT
AAAAGTGATTGAAAACCGTCCCTCGATCGGACTACACTGTCCCTCGATCG
AGAGACGCGCGTATCCAGAATGAGCGACGTAGTTCGATCGGGTGACGTCC
CCCGATCCGGGTAAAATGCCGTACTGAAAACAACCGCGTGTTATGTGtag
tttcaaattatgacctttaAACACTGACCCAAAATgacgcatgtaatgat
aaacaaagtcagaATGCCgtgaatgcgctagaaattgcTCGTAAAAATTG
GCaataataaagtttttgaaCAAAGGAAAAATTTCTGACTTTCATGAAAG
CTATTGATGattttgtggtaaaaaagtcTTTTATTTGGTATGAATTTGCA
CAGAATTAGAGGCAATTCCACCATTTACATTTCTTACTTGGGTACTGAGA
TAGGGAAATTGATCTACTATCAGCNaatagtataaaaccttattttctac
cATATAGTCCTTcttctaaaacaaaaaaacaaaatacattaggaaaatga
agaaattacgagtgttatcaagccacccaaaatgaactttcattcgcG Run BLAST on NCBI transcript from alignment at scaffold_297:177598..178645 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057713 ID=TCONS_00057713|Name=TCONS_00057713|organism=Clytia hemisphaerica|type=transcript|length=1048bp|location=Sequence derived from alignment at scaffold_297:177598..178645 (Clytia hemisphaerica)
Cgcgaatgaaagttcattttgggtggcttgataacactcgtaatttcttc
attttcctaatgtattttgtttttttgttttagaagAAGGACTATATggt
agaaaataaggttttatactattNGCTGATAGTAGATCAATTTCCCTATC
TCAGTACCCAAGTAAGAAATGTAAATGGTGGAATTGCCTCTAATTCTGTG
CAAATTCATACCAAATAAAAgacttttttaccacaaaatCATCAATAGCT
TTCATGAAAGTCAGAAATTTTTCCTTTGttcaaaaactttattattGCCA
ATTTTTACGAgcaatttctagcgcattcacGGCATtctgactttgtttat
cattacatgcgtcATTTTGGGTCAGTGTTtaaaggtcataatttgaaact
aCACATAACACGCGGTTGTTTTCAGTACGGCATTTTACCCGGATCGGGGG
ACGTCACCCGATCGAACTACGTCGCTCATTCTGGATACGCGCGTCTCTCG
ATCGAGGGACAGTGTAGTCCGATCGAGGGACGGTTTTCAATCACTTTTAT
TCTTTCGTTTTTCTGCCCGCGGCGCAAACTTTTGGGCCGATGAAATCTCT
AGTGAATATTGTAGAATGTGATAAATTTGAAGAGAAATTATTATCCCTAA
ATTTTAACGAATTTTAAGAGTTACTTTATAGCCAAATTTAggtctttttc
tttcttgtttgaAATACTTTTAGTTTTTCTCGCCATGCATCGTTCTGTGC
GACTCTATTCTAATCCTTATTATTCTTTAGTCATAAATATTAATCCTCTG
ATTTTTAGAACGAAGTTTTTACTAATACCaagttgtatattttttataaa
tatatattttattttataccttTTTCATATAATCTATACTTATTTATAGT
ATGCCTATAACAATTCATATCTTTAGTTAAATCCAGAGAAATCACATTCA
GCTTCAATATACTACTAGACTTCTCGAATCTGCCTAAATCTAGCTCTTTT
TGATCTTAGTCTTTTGAttttagagtttttaattattgaataaagcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057713-exon-scaffold_297-1491911889:177598..178645 | TCONS_00057713-exon-scaffold_297-1491911889:177598..178645 | Clytia hemisphaerica | exon |
| TCONS_00057713-exon-scaffold_297-1510915933:177598..178645 | TCONS_00057713-exon-scaffold_297-1510915933:177598..178645 | Clytia hemisphaerica | exon |
| TCONS_00057713-exon-scaffold_297-1575043694:177598..178645 | TCONS_00057713-exon-scaffold_297-1575043694:177598..178645 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_297 | supercontig | scaffold_297:177598..178645 . |
Blast
The following BLAST results are available for this feature:
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