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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057672 ID=TCONS_00057672|Name=TCONS_00057672|organism=Clytia hemisphaerica|type=transcript|length=861bp
atcacttgtttactttgtaagaactaattaccgaagggtatatcaccgtc
tatcaagagctattgatttgattcttataaagtatatgcttatgaaaaaa
ataaatatatgctcaaaatactttcgctaggcgaaattaacaaGACACAC
AAAACACAACATTTGCAAGTCCTGTCACAAAAAACGAATTTTCTGCAGCT
ATTGGATCgaacacacaaaacacagaaaacacaactTTTGCAGGTCCGAt
cataaaaaagtcatttttctgCAGTTATTGGATCgaacacacaaaacaca
gaaaacacaactTTTGCAAGTCCGAtcataaaaaagtcatttttctgcag
ctattggatcgaacacacaaaacacagaaaacacaactTTTGCAAGTCCG
Atcataaaaaagtcatttttctgcagctattggatcgaacacacaaaaca
cagaaaacacaactTTTACAAGTCCTATCAACTACTTCATTGGAATAAAT
TGAACTAGCCTGGCTGATTCTTTAGACTGAAGGACATATTCCATCGACCA
ATCAGATTCATTCTTTACTTTGTTCACCACTACTGAAGAGTTCAAACAGT
NAAATTCGCAGTAGTAGCTGGCTAAGTTGTTTCACAAACGTGATGGTTGA
ATGGCTGGAAGAAGAGTTCAAACAGTCTCAActttcatcatttcattgag
TATCTGGTGTTACATGTTTATAGTATCGAAAAAGTCCATGGCTTTGCATA
TCGTTTGAGCTTGGTATTATCATCGCCTTcctgtttttgttgttgtttgg
taCAATGTACTCAATCATTTCACTCATCATGGATAGGTACTTTTAAACCA
TCGGTTCGTTT Run BLAST on NCBI transcript from alignment at scaffold_297:1..1162- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057672 ID=TCONS_00057672|Name=TCONS_00057672|organism=Clytia hemisphaerica|type=transcript|length=1162bp|location=Sequence derived from alignment at scaffold_297:1..1162- (Clytia hemisphaerica)
ATCACTTGTTTACTTTGTAAGAACTAATTACCGAAGGGTATATCACCGTC
TATCAAGAGCTATTGATTTGATTCTTATAAAGTATATGCTTATGAAAAAA
ATAAATATATGCTCAAAATACTTTCGCTAGGCGAAATTAACAAGACACAC
AAAACACAACATTTGCAAGTCCTGTCACAAAAAACGAATTTTCTGCAGCT
ATTGGATCGAACACACAAAACACAGAAAACACAACTTTTGCAGGTCCGAT
CATAAAAAAGTCATTTTTCTGCAGTTATTGGATCGAACACACAAAACACA
GAAAACACAACTTTTGCAAGTCCGATCATAAAAAAGTCATTTTTCTGCAG
CTATTGGATCGAACACACAAAACACAGAAAACACAACTTTTGCAAGTCCG
ATCATAAAAAAGTCATTTTTCTGCAGCTATTGGATCGAACACACAAAACA
CAGAAAACACAACTTTTACAAGTCCTATCAACTACTTCATTGGAATAAAT
TGAACTAGCCTGGCTGATTCTTTAGACTGAAGGACATATTCCATCGACCA
ATCAGATTCATTCTTTACTTTGTTCACCACTACTGAAGAGTTCAAACAGT
NAAATTCGCAGTAGTAGCTGGCTAAGTTGTTTCACAAACGTGATGGTTGA
ATGGCTGGAAGAAGAGTTCAAACAGTCTCAACTTTCATCATTTCATTGAG
GTGAGAGTTTTTGATTTATATCAAAGTTTATTGATTCCTTTTCAAAGTTA
TTTTCAAAGAAGATAGCAGCAAGTGTACACTGGTACATTTACCTCACTTG
CAAGTTATCAAAAAGATAGCATTAAGCTTGTTTGCATATAAATCTCTGTT
ATAAATCAAAATTCTGCAAAATTTACTAAAAATGAACACTCAAATCTCTC
TAAGTATTGACAAAAGAATAATGGACAAAATTTATATATGAATGAATTTG
GTGTTGAAATGAAAATGTTGGTAATTTGTTGATTGTTTATTGTTGTTTTA
GTATCTGGTGTTACATGTTTATAGTATCGAAAAAGTCCATGGCTTTGCAT
ATCGTTTGAGCTTGGTATTATCATCGCCTTCCTGTTTTTGTTGTTGTTTG
GTACAATGTACTCAATCATTTCACTCATCATGGATAGGTACTTTTAAACC
ATCGGTTCGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057672-exon-scaffold_297-1575043694:463..1162 | TCONS_00057672-exon-scaffold_297-1575043694:463..1162 | Clytia hemisphaerica | exon |
| TCONS_00057672-exon-scaffold_297-1575043694:1..161 | TCONS_00057672-exon-scaffold_297-1575043694:1..161 | Clytia hemisphaerica | exon |
| TCONS_00057672-exon-scaffold_297-1510915933:463..1162 | TCONS_00057672-exon-scaffold_297-1510915933:463..1162 | Clytia hemisphaerica | exon |
| TCONS_00057672-exon-scaffold_297-1510915933:1..161 | TCONS_00057672-exon-scaffold_297-1510915933:1..161 | Clytia hemisphaerica | exon |
| TCONS_00057672-exon-scaffold_297-1491911889:463..1162 | TCONS_00057672-exon-scaffold_297-1491911889:463..1162 | Clytia hemisphaerica | exon |
| TCONS_00057672-exon-scaffold_297-1491911889:1..161 | TCONS_00057672-exon-scaffold_297-1491911889:1..161 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_297 | supercontig | scaffold_297:1..1162 - |
Blast
The following BLAST results are available for this feature:
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