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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057659 ID=TCONS_00057659|Name=TCONS_00057659|organism=Clytia hemisphaerica|type=transcript|length=1030bp
CTACCTTTTCAATAACACGGTCAACGATCTCGTCCAGCGAGTCACCAAAC
CGTCTGTCATTCGTTCCAGTCTCGGTTCCATTCCCCTGATTCACATCAGT
TGTATTTACACTACTCCTTGTCGTCGTCAAATTATTTTTCACTTTCAGCA
TAATCAGTGTATTATCAATTTCCTTAATTTCGTCTAATAGTTCTAAGCGT
GCTTGCTCTAATTTAAAAATTTCTTTGGCTGCCATTTGCTCTTCAACGGA
AGTTGGGGCAGATGGTTTTGGTGAAGGGAGATCATTTGTTTTATCTCCTA
GTTCATTTAAAGCCGACTTAATCCTCTCTAGCTCTTTCTTGATTTCGTTG
CGTAAGTCTTTAACAGTCGCAGGTGTACTGGAAATAAAAGGCTCGTCAGT
AGATTTAGGATATAAAGTAAGAACTTTGGAGAAATCAGGGTCAGCTGTGT
ATGGGGTGGGTGTTGGCATTTCAAAAGTTGAAGTTCTTCGTTTTGTACTT
TCGATTGTGTCTCGTGTAGTGTATTCTGTTGTTGCCAAAGTCTCTGTTGT
AGGCTGGGTCGTTGATGTAGTAAGCATAATGGTCGTTGTTGTGGGGGTGG
TTGTTGTTGTAGTTTGTGTGGTTGTTGTTGTGGTAGGGGTGGTCGTTGTT
GTTGTAGTAGGGGTAGTCGTGGTAGGGGTAGTCGTTGTTGTACTAGGGGT
GGTCGTTGTCGTGGTAGGGTTGGTAGTTGTTGTTCTAGTAGGGGTAGTCG
TTGTTGTGGTAGGGGTGGTCGTTGTTGCAGTAGTAGGAGTGGTCGTTGTC
GTGGTAGGGGTGGTCGTGGTAGGGGTGGTCGTTGTCGTAGTGGGAGTGGT
CGTTGTCGTAGTAGGGGTGGTCGTTGTTGTAGTAGTAGGAATGGTCGTTG
TCGTGGTAGGGGTGGTCATTGTCGTAGTGGGAGTGGTCGTTGTCGTAGTA
GGGGTGGTCGTTGTTGTAGTTGTGGTAGTCGGAAGAGAAGTGGTCGTTGT
GTTAAATTGTCCCCTTTCCTCTTTAGCAAC Run BLAST on NCBI transcript from alignment at scaffold_297:129875..131033+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057659 ID=TCONS_00057659|Name=TCONS_00057659|organism=Clytia hemisphaerica|type=transcript|length=1159bp|location=Sequence derived from alignment at scaffold_297:129875..131033+ (Clytia hemisphaerica)
CTACCTTTTCAATAACACGGTCAACGATCTCGTCCAGCGAGTCACCAAAC
CGTCTGTCATTCGTTCCAGTCTCGGTTCCATTCCCCTGATTCACATCAGT
TGTATTTACACTACTCCTTGTCGTCGTCAAATTATTTTTCACTTTCAGCA
TAATCAGTGTATTATCAATTTCCTTAATTTCGTCTAATAGTTCTAAGCGT
GCTTGCTCTAATTTAAAAATTTCTTTGGCTGCCATTTGCTCTTCAACGGA
AGTTGGGGCAGATGGTTTTGGTGAAGGGAGATCATTTGTTTTATCTCCTA
GTTCATTTAAAGCCGACTTAATCCTCTCTAGCTCTTTCTTGATTTCGTTG
CGTAAGTCTTTAACAGTCGCAGGTGTACTGGAAATAAAAGGCTCGTCAGT
AGATTTAGGATATAAAGTAAGAACTTTGGAGAAATCAGGGTCAGCTGTGT
ATGGGGTGGGTGTTGGCATTTCAAAAGTTGAAGTTCTTCGTTTTGTACTT
TCGATTGTGTCTCGTGTAGTGTATTCTGTTGTTGCCAAAGTCTCTGTTGT
AGGCTGGGTCGTTGATGTAGTAAGCATAATGGTCGTTGTTGTGGGGGTGG
TTGTTGTTGTAGTTTGTGTGGTTGTTGTTGTGGTAGGGGTGGTCGTTGTT
GTTGTAGTAGGGGTAGTCGTGGTAGGGGTAGTCGTTGTTGTACTAGGGGT
GGTCGTTGTCGTGGTAGGGTTGGTAGTTGTTGTTCTAGTAGGGGTAGTCG
TTGTTGTGGTAGGGGTGGTCGTTGTTGTAGTAGGGGTGGTCGTTGTCGTG
GTAGGGTTGGTAGTTGTTGTTGTAGTAGGGGTGGTCGTCGTCGTTGTAGG
AGTGGTCGTTGTTGTAGTAGGAGTGGTCGTTGTTGTAGTAGAGGTGGTCG
TTGTTGCAGTAGTAGGAGTGGTCGTTGTCGTGGTAGGGGTGGTCGTGGTA
GGGGTGGTCGTTGTCGTAGTGGGAGTGGTCGTTGTCGTAGTAGGGGTGGT
CGTTGTTGTAGTAGTAGGAATGGTCGTTGTCGTGGTAGGGGTGGTCATTG
TCGTAGTGGGAGTGGTCGTTGTCGTAGTAGGGGTGGTCGTTGTTGTAGTT
GTGGTAGTCGGAAGAGAAGTGGTCGTTGTGTTAAATTGTCCCCTTTCCTC
TTTAGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057659-exon-scaffold_297-1491911889:129875..130638 | TCONS_00057659-exon-scaffold_297-1491911889:129875..130638 | Clytia hemisphaerica | exon |
| TCONS_00057659-exon-scaffold_297-1510915933:129875..130638 | TCONS_00057659-exon-scaffold_297-1510915933:129875..130638 | Clytia hemisphaerica | exon |
| TCONS_00057659-exon-scaffold_297-1575043694:129875..130638 | TCONS_00057659-exon-scaffold_297-1575043694:129875..130638 | Clytia hemisphaerica | exon |
| TCONS_00057659-exon-scaffold_297-1491911889:130768..131033 | TCONS_00057659-exon-scaffold_297-1491911889:130768..131033 | Clytia hemisphaerica | exon |
| TCONS_00057659-exon-scaffold_297-1510915933:130768..131033 | TCONS_00057659-exon-scaffold_297-1510915933:130768..131033 | Clytia hemisphaerica | exon |
| TCONS_00057659-exon-scaffold_297-1575043694:130768..131033 | TCONS_00057659-exon-scaffold_297-1575043694:130768..131033 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_297 | supercontig | scaffold_297:129875..131033 + |
Blast
The following BLAST results are available for this feature:
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