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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057642 ID=TCONS_00057642|Name=TCONS_00057642|organism=Clytia hemisphaerica|type=transcript|length=897bp
GTTCGCATCAATGGTAAATTCAGCGACGAGTTTGACGTAAACGTTGGTGT
GCATCAAGGCTCAGTCCTGAGTCCTTTGCTATTTATAATTGTCATGGAAG
CTCTCTCTCGGTCATTTCGTACCGGTTGTCCTTGGGAATTTCCATGCGCA
GATGATTTGGCTATTATTGCAGAATCTAAAAAGGAGCTTTTGTTCAAGCT
AACCCAGTGGATACAGGCCATTGAGTCAAAGGGTTTACGTGTGAACACTC
AGAAGACCAAAGTAATGCATTGCAAACATGGTCTGAGGGAAAGGCAAAAG
ACAAGTAAATGGCCTTGTGGTGTCTGCTACAAAGGAGTAGGGAGCAACTC
TATTTTATGCCGCCAATGTAAAAACTACATTCATAAACGATGCTCGGGCA
TAAAAGGGCGTTTAAGGGAAGATTTTAACTATGTTTGTCCTGCTTGTCTA
AATCCTGTTGTTGTACCTCCCTCCCCTGTGTTTTCTGTAGACGGTTCAGA
TCTTGAGGTAGTACCCACATTCTGTTACCTAGGTGATATGATTGGGGACA
ATGGAGGCTGCTTTGATGCAATTACCTCAAGGGTGAAGTCTGCGTGGAAT
AAATTTAGACAGTTGTTGCCAATTTTGACTAATAAGAGCATCCCATTGCA
ATGTCGTGGTCGTGTCTTTACTTCGGCCGTAAGGGGTGTTTTGCTTCATG
GAAGCCCGACCTGGGCAGTCACGGTTGATGACTGTAGCAGGCTTGTTCGA
TATGACAACGCGATGGTTCGTTGGATCTGTTCAACTCGTCTGGCTCATAG
GATTTCGATGACCCAGCTTAGAGAAAGACTTGGTATTCCATGTATTGAAG
ACTTAGTTTCCCAAGGTAGACTTCGTTGGTTCGGTCATGTGCAGCGT Run BLAST on NCBI protein sequence of TCONS_00057642-protein >TCONS_00057642-protein ID=TCONS_00057642-protein|Name=TCONS_00057642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
VRINGKFSDEFDVNVGVHQGSVLSPLLFIIVMEALSRSFRTGCPWEFPCA
DDLAIIAESKKELLFKLTQWIQAIESKGLRVNTQKTKVMHCKHGLRERQK
TSKWPCGVCYKGVGSNSILCRQCKNYIHKRCSGIKGRLREDFNYVCPACL
NPVVVPPSPVFSVDGSDLEVVPTFCYLGDMIGDNGGCFDAITSRVKSAWN
KFRQLLPILTNKSIPLQCRGRVFTSAVRGVLLHGSPTWAVTVDDCSRLVR
YDNAMVRWICSTRLAHRISMTQLRERLGIPCIEDLVSQGRLRWFGHVQR Run BLAST on NCBI transcript from alignment at scaffold_295:40443..41339 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057642 ID=TCONS_00057642|Name=TCONS_00057642|organism=Clytia hemisphaerica|type=transcript|length=897bp|location=Sequence derived from alignment at scaffold_295:40443..41339 (Clytia hemisphaerica)
ACGCTGCACATGACCGAACCAACGAAGTCTACCTTGGGAAACTAAGTCTT
CAATACATGGAATACCAAGTCTTTCTCTAAGCTGGGTCATCGAAATCCTA
TGAGCCAGACGAGTTGAACAGATCCAACGAACCATCGCGTTGTCATATCG
AACAAGCCTGCTACAGTCATCAACCGTGACTGCCCAGGTCGGGCTTCCAT
GAAGCAAAACACCCCTTACGGCCGAAGTAAAGACACGACCACGACATTGC
AATGGGATGCTCTTATTAGTCAAAATTGGCAACAACTGTCTAAATTTATT
CCACGCAGACTTCACCCTTGAGGTAATTGCATCAAAGCAGCCTCCATTGT
CCCCAATCATATCACCTAGGTAACAGAATGTGGGTACTACCTCAAGATCT
GAACCGTCTACAGAAAACACAGGGGAGGGAGGTACAACAACAGGATTTAG
ACAAGCAGGACAAACATAGTTAAAATCTTCCCTTAAACGCCCTTTTATGC
CCGAGCATCGTTTATGAATGTAGTTTTTACATTGGCGGCATAAAATAGAG
TTGCTCCCTACTCCTTTGTAGCAGACACCACAAGGCCATTTACTTGTCTT
TTGCCTTTCCCTCAGACCATGTTTGCAATGCATTACTTTGGTCTTCTGAG
TGTTCACACGTAAACCCTTTGACTCAATGGCCTGTATCCACTGGGTTAGC
TTGAACAAAAGCTCCTTTTTAGATTCTGCAATAATAGCCAAATCATCTGC
GCATGGAAATTCCCAAGGACAACCGGTACGAAATGACCGAGAGAGAGCTT
CCATGACAATTATAAATAGCAAAGGACTCAGGACTGAGCCTTGATGCACA
CCAACGTTTACGTCAAACTCGTCGCTGAATTTACCATTGATGCGAAC Coding sequence (CDS) from alignment at scaffold_295:40443..41339 >TCONS_00057642 ID=TCONS_00057642|Name=TCONS_00057642|organism=Clytia hemisphaerica|type=CDS|length=897bp|location=Sequence derived from alignment at scaffold_295:40443..41339 (Clytia hemisphaerica)
ACGCTGCACATGACCGAACCAACGAAGTCTACCTTGGGAAACTAAGTCTT
CAATACATGGAATACCAAGTCTTTCTCTAAGCTGGGTCATCGAAATCCTA
TGAGCCAGACGAGTTGAACAGATCCAACGAACCATCGCGTTGTCATATCG
AACAAGCCTGCTACAGTCATCAACCGTGACTGCCCAGGTCGGGCTTCCAT
GAAGCAAAACACCCCTTACGGCCGAAGTAAAGACACGACCACGACATTGC
AATGGGATGCTCTTATTAGTCAAAATTGGCAACAACTGTCTAAATTTATT
CCACGCAGACTTCACCCTTGAGGTAATTGCATCAAAGCAGCCTCCATTGT
CCCCAATCATATCACCTAGGTAACAGAATGTGGGTACTACCTCAAGATCT
GAACCGTCTACAGAAAACACAGGGGAGGGAGGTACAACAACAGGATTTAG
ACAAGCAGGACAAACATAGTTAAAATCTTCCCTTAAACGCCCTTTTATGC
CCGAGCATCGTTTATGAATGTAGTTTTTACATTGGCGGCATAAAATAGAG
TTGCTCCCTACTCCTTTGTAGCAGACACCACAAGGCCATTTACTTGTCTT
TTGCCTTTCCCTCAGACCATGTTTGCAATGCATTACTTTGGTCTTCTGAG
TGTTCACACGTAAACCCTTTGACTCAATGGCCTGTATCCACTGGGTTAGC
TTGAACAAAAGCTCCTTTTTAGATTCTGCAATAATAGCCAAATCATCTGC
GCATGGAAATTCCCAAGGACAACCGGTACGAAATGACCGAGAGAGAGCTT
CCATGACAATTATAAATAGCAAAGGACTCAGGACTGAGCCTTGATGCACA
CCAACGTTTACGTCAAACTCGTCGCTGAATTTACCATTGATGCGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057642-exon-scaffold_295-1491911889:40443..41339 | TCONS_00057642-exon-scaffold_295-1491911889:40443..41339 | Clytia hemisphaerica | exon |
| TCONS_00057642-exon-scaffold_295-1510915933:40443..41339 | TCONS_00057642-exon-scaffold_295-1510915933:40443..41339 | Clytia hemisphaerica | exon |
| TCONS_00057642-exon-scaffold_295-1575043694:40443..41339 | TCONS_00057642-exon-scaffold_295-1575043694:40443..41339 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_295 | supercontig | scaffold_295:40443..41339 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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