|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057599 ID=TCONS_00057599|Name=TCONS_00057599|organism=Clytia hemisphaerica|type=transcript|length=1263bp
CTGAACAGGAACCTCCCGATTGGTTAGAATCTCTGAACTGGAACCAATCG
AAATGTAGTCTCTATGGTTACATCAAGTTGTTTACAACAgcgccaaattt
caaaaaaaaaagaaaaaaaaaattttttttcgctctTTGCATCCAACACT
GAAGACAACTGCTAAACTTCACCTCAATGTAAGAATATTTCTATGTTCAT
TTACCCACAATCTAATTTTCCCCACTGCTTTCAAAATACCTATTTCTTTC
AacatctctttttctttttctcaatcTTCTCACCCTCCTCTGGAGGCTTC
ACTCAGCCACATTACAGTCTTTGAATCCCTCCACTGATAGGTCATGGTCA
TGTTCCACTTCTACAGGTATAAGTTGATGAGACATGACTCCTGATCGAAT
TCATGTCTCTTGGTAGAGAAGATGGGTGGTTCTAGAAAAGCAAAGAGTGT
TTACTCCTGCCGGCACACCTAACTCTAGGGGAAGTCCTAAATGCTTCCTT
TTCTTCTCGCCTAGACAACGTTCTACAACTCTATTCCATTACGGCCATTC
AAAAAGCCTAGACAGCCACATGACTTTGTCTCCACTACTCCAACACAAAA
ATAGGATCTTCATCTTTTCAAAGTTTGTTCTATGGCCCACAGCCCCATGT
TATGATTTATTTAGCATACACGTTTGACATTTCCATGACACCTTGGTTCA
AAGCCCATCACGATCTcatcttcttttcttcaaaacattgTTCTGATTAC
ACCTTCTATGCTCAAGCAATCCCTCTCTATTCATTTTCAAGCAGCCCAAT
CTGCTCCAAGAATACTTTCTCAGCTCTTCCTTAAGCAGCACtgacttcaa
aaaaaaaatttttttttttcaaacctacTACTGGTAATTAGATTGATATA
GATTACCCGTCTGCTTTCAGGGTTTCTGTGTCGTGGGATAGATCTTCCCA
CGATACCGAAACCTTGGACAGCATAATAGTACGCCTTTTGATTAGGGACA
TAGGGATCGAAACATAAGCTTCAGAATTATTGTAGAAATTACCAAATGAC
CGGTAATTATGGGTCACTATCTGTTATTTGCAGCATTGAGCAGCTGGAGG
GTTGGGCTTCTTTTCTCAATCACTTTtttgaaagtaaacaaaaataaatt
tactaagttaaaatcttctttaaaaagtttttaaaatcctTCTTTTTCGA
TTGCCATTTTTAGTCAGAGAGAAGCAATCTTTGTGTTTGTTGGGACTAAA
AAGAATTATTAAA Run BLAST on NCBI transcript from alignment at scaffold_293:238767..240029 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057599 ID=TCONS_00057599|Name=TCONS_00057599|organism=Clytia hemisphaerica|type=transcript|length=1263bp|location=Sequence derived from alignment at scaffold_293:238767..240029 (Clytia hemisphaerica)
TTTAATAATTCTTTTTAGTCCCAACAAACACAAAGATTGCTTCTCTCTGA
CTAAAAATGGCAATCGAAAAAGAaggattttaaaaactttttaaagaaga
ttttaacttagtaaatttatttttgtttactttcaaaAAAGTGATTGAGA
AAAGAAGCCCAACCCTCCAGCTGCTCAATGCTGCAAATAACAGATAGTGA
CCCATAATTACCGGTCATTTGGTAATTTCTACAATAATTCTGAAGCTTAT
GTTTCGATCCCTATGTCCCTAATCAAAAGGCGTACTATTATGCTGTCCAA
GGTTTCGGTATCGTGGGAAGATCTATCCCACGACACAGAAACCCTGAAAG
CAGACGGGTAATCTATATCAATCTAATTACCAGTAgtaggtttgaaaaaa
aaaaattttttttttgaagtcaGTGCTGCTTAAGGAAGAGCTGAGAAAGT
ATTCTTGGAGCAGATTGGGCTGCTTGAAAATGAATAGAGAGGGATTGCTT
GAGCATAGAAGGTGTAATCAGAAcaatgttttgaagaaaagaagatgAGA
TCGTGATGGGCTTTGAACCAAGGTGTCATGGAAATGTCAAACGTGTATGC
TAAATAAATCATAACATGGGGCTGTGGGCCATAGAACAAACTTTGAAAAG
ATGAAGATCCTATTTTTGTGTTGGAGTAGTGGAGACAAAGTCATGTGGCT
GTCTAGGCTTTTTGAATGGCCGTAATGGAATAGAGTTGTAGAACGTTGTC
TAGGCGAGAAGAAAAGGAAGCATTTAGGACTTCCCCTAGAGTTAGGTGTG
CCGGCAGGAGTAAACACTCTTTGCTTTTCTAGAACCACCCATCTTCTCTA
CCAAGAGACATGAATTCGATCAGGAGTCATGTCTCATCAACTTATACCTG
TAGAAGTGGAACATGACCATGACCTATCAGTGGAGGGATTCAAAGACTGT
AATGTGGCTGAGTGAAGCCTCCAGAGGAGGGTGAGAAgattgagaaaaag
aaaaagagatgtTGAAAGAAATAGGTATTTTGAAAGCAGTGGGGAAAATT
AGATTGTGGGTAAATGAACATAGAAATATTCTTACATTGAGGTGAAGTTT
AGCAGTTGTCTTCAGTGTTGGATGCAAagagcgaaaaaaaattttttttt
tcttttttttttgaaatttggcgcTGTTGTAAACAACTTGATGTAACCAT
AGAGACTACATTTCGATTGGTTCCAGTTCAGAGATTCTAACCAATCGGGA
GGTTCCTGTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057599-exon-scaffold_293-1491911889:238767..240029 | TCONS_00057599-exon-scaffold_293-1491911889:238767..240029 | Clytia hemisphaerica | exon |
| TCONS_00057599-exon-scaffold_293-1510915933:238767..240029 | TCONS_00057599-exon-scaffold_293-1510915933:238767..240029 | Clytia hemisphaerica | exon |
| TCONS_00057599-exon-scaffold_293-1575043694:238767..240029 | TCONS_00057599-exon-scaffold_293-1575043694:238767..240029 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_293 | supercontig | scaffold_293:238767..240029 . |
Blast
The following BLAST results are available for this feature:
|
