TCONS_00057563 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057563
Unique NameTCONS_00057563
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057563 ID=TCONS_00057563|Name=TCONS_00057563|organism=Clytia hemisphaerica|type=transcript|length=298bp
ATGGACAAATGTTCCTATTGGTCGCAGTTGTTGTCCCGTTCACCCTCCGC
ACTTTGTGCAGACTCCTCAAACTGCTCCCTATATGGCCCCCGTGCCATTA
GGGCAGCAAAACTGCCAGGATAGGATGTAAGTTCACAACATTGAACAGCA
GCTCATCAGCAGACATCGTGAGTTTTCGACGATTTTCATGTctgattgta
aatattttcttaaaacaGATTATGAAAGGCATCCGAACCGATTGAACCCC
GGTGAAGCAGCTCATCAACAGACCTAAGCTCAAGATCGAAGTTTTCGA
Run BLAST on NCBI

transcript from alignment at scaffold_293:164275..177622+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057563 ID=TCONS_00057563|Name=TCONS_00057563|organism=Clytia hemisphaerica|type=transcript|length=13348bp|location=Sequence derived from alignment at scaffold_293:164275..177622+ (Clytia hemisphaerica)
ATGGACAAATGTTCCTATTGGTCGCAGTTGTTGTCCCGTTCACCCTCCGC
ACTTTGTGCAGACTCCTCAAACTGCTCCCTATATGGCCCCCGTGCCATTA
GGGCAGCAAAACTGCCAGGATAGGATGTAAGGTAAAATTGTCTTGAATTT
AGCAACAAATCAGCTCAACTCACAGTGCTTTGTCTTAGTATAatatacgc
ttttttataagtatGTCTTCCATAaaaatatcagggtgaaaattggtcAA
ACCGTAAAAATACCATAAGAATACCCTCCAGGGTTTGTTTTAATCagtca
ataaaaataaaactatcaattttgagaaaagggaaaacaaaagtgacaca
AATTAATTACCAAAAGAGTGTACTTTCTTTTGTGTATGTATTagatattt
ttctcttttaccATTCTTTTACCATTCATATagcatatatattttcttag
CCAATTAACTGAACTTTTAGCACTTTCAATCACTTTTAATCATAGCCTGT
TAATCAGTgttaattacttttttatatgttttacatagaatttgttcaaa
ttttttattcacaCATCTGATGATCGTCTCTGGCGAGAAACAGtctgtaa
tgttttgatttttttttaaggaaaataaattttgagaaatttttctctga
aataATTAAGAATATtcaacctcatttttggcaatttctcgCAAAAACCG
CAAAATGGAGTtcccccaaaaattaaaaaaacatatcATGGGTTCTTCGA
GTTGGTGGGGCGTTAAGACGGGCAAAAATCTATGACTACGTCATCAAAAA
CACCTGTGCGCTCCTCAGCATAGACAAAGAACCTTCCGAAACGGATTAAA
CGGACATGCGGAAAAACGAACTAGCGGAAAAACGAACAAGCGGAAAAAGT
GGCCAGAGAGCCAGAGTCGTCGGGCATGTGCCGATCTATTCTACTTTTTC
ACAACTCCAAAACTGACCAGCCGGATAGGATTTtaactatttttattttt
gttcctgAAATAGAATTTCTTATCTAAGCATTATAAGCACGGTCTGGTTG
GTTCGGAGCTCTGTGTCACCGGATCACACCTCATTTCGACTAAAGGAAGC
TGAAGTTTACTATTTTAACAGACCGTCTCAGCGGCGGATTTTTGTGAGGA
AAAGTGAGCCCCTCCACAGGATTGGGAGAGAGCTTGGCCTAAGTCAAACT
CTATTACCCACAACGCAcgcttcccttaaggtattataGAGCAGATTTAC
AAATGATATAATGTCTCTCTTGATACTTTATTATAGTTCACAACATCGAA
CAGCAGCTCATCAGCAGACATCTTGAGTTTTCAACGATTTTCATGTttga
ttgtaaatattttcttaaaacaGATTATGAAAGGCATCCGAACCGATTGA
ACCCCAGTGAAGCCAGGCCAGTATCACAACCCGATTCTACAAAATACGTA
GTTCTGTAAATTCTAGAATCTACAAAATGTGTAGATTCTGTATTATCAGA
AACTACATaatatgtagatttcaaaatctACATAATATGTATATCCTAGA
AGATTCTAAtagtgacgtaatgttttaaaaCAAGCCAAAATCACTCCAGA
ATCAACCAAATAAGTAGAAGTGTCAAAGATGCTAATTATGTGCGTGCTCA
AATTAAATtcaagctccaaccctaaccctaactgtcTAGATAGTCATTTT
CCCGGGATTACGCCATCCACAACCCCAACCAAAAAGTGACTGAACCACCC
TTAGCGATTCATCCTTTATATTCTAAGAACGCTAAATAACTCATTGTGGT
TTATACAATATAGACCTATATGTGGAGCAATACTCCATCTTTTCCGGTTC
TACAAAATACGTAGAAATTCTAGAAACTACAGAATATGTAGATTCTGTGC
TATCAGAAactacatatattgtagatttcAACCAATTGACAGAACTACAT
ATATTGTAGAACCGGGTGTGATGATGTGTTGGTGAAGCAGCTCATCAACA
GACCTAAGCTCAAGATCGAAGTTTTCGACGATTTTAAAGACTTTTAGCAA
CTCTTGTGTTCTTCGACTTATTATTATCTATAAGAATGatatattttgat
tgaaaatgttttgtttaaaaattggcAATTTTACCGAATTATTGATTTTG
AGAAGGATAAATTTGAAGGTACATATTTTCTTAGAAGAGTGGCAATTTCA
CGGAACTTTAATTTTAAGAACGATattttgatggaaaatattttatacAG
TAGACACTCGCTATTTGGAATCCTCAAGGGgaaaattttgttcgaattac
agagagttcGAATAATAGGAAGTCACGATAATTTGAGATTTGAAgttttt
tcacataaaaattATCCTGATCCAACCTGATCAATTATCAGTTTGTTAGT
TATTGGAAGTGAATAAATTTTGAACTTGTTTTAAAATACGGTATACatga
tttttattaaattctagATTGACAAATGTTCCGTTTGGTGGCGGTAGTAA
TACCTTACAGTCCAATACGCTTTCAAAAACAAGCTAAAGGAAcatgtcaa
aaaaaattcgtcCACAAAACGCCACCAAAACAACCATGGCGTTGCAAACA
TTGCCCGATTCGGAATGCTTTTAAAAACAAGCTAAAGGAAcatgtcaaaa
aaaattcgtcCACAAAACGCCACCAAAACAACCATGGCGTTGCAAACATT
GCCCGATTCGGAATGCTTTTAAAAACAAGCTAAAGGCACATCTGAAAAAG
AGTCATCCGGGTACATACATAACGGAAAGGTGGCAACGAACTAACAAACT
ATTCCGTTTGGTGGCAGTAGTGATCCCCTTCGCACAACCCAATCATCAGC
AGCCTCGTCCACCTGCTGCCTATATGGCCCTCGTGCAAATTGGTCAGAAT
gggaaattttttaattcattcatCTTTATTCTCTTAgttacttttttctg
tttttacaATTTCATTATAATAGCCAAACTTAGAAAAAGGGTTTATGGGG
CTTAAAAATGTACAAATCACCTAGCAAACAAACAAAACACTCCTCCTGCT
GCTCCTGAAATCCAACAGCCACCTGTTTTATACTACTGTACTGCTGATCA
ACAACATCAGCACCACCAGAAACACCTATTTTTTACTACTGCActggtac
tcttaggtgccaaataaacgggggggggNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAAtta
atagacgggggggggttggaaaattttcgacaaattaacaagcggggggg
gggcgtttatttggcacatAAGAGTAATCAACAGCACAATGTTTATACGT
CAGTCAGTCTTTATTCCCTAGAGTTTTTTCAGTTTCTACTTTTTACTAAA
ATAAGCCAAATTTAAAAGATGCAAAATTTTTCGATTAGGATGCAACAAAG
AGTGCCATTAGGGCAGCAAAATGGCCAAGATTGGGGCCTGGCCAGGTACC
TAATTGACAATTTACTATAAATGTTAACATTTATAAGCCatatgtaaaga
aattttgagcaCTCTTTAAAACTATAAACCGTTTAACCATTTTCAAATTA
CCTCAAAAAGAGGGGAAATAGAGTCTCAATATTGAATGAcattcagtttc
aaaattaacATCTCTTCTTTTAATATGTCAGCCAATTCCATTCGAAGACA
TTAATACCATCTTTATGAACGTCATATTCAGGAAGAGAGTAGGACAACAA
AAGATGGTTTTCAGAGTGAGACTCATCCTGATTCGAAAGGTAGAAACAAA
GCAAGTTATTTCGGTTGTAAAGAGTGCTCGATGCCAACAAAAAGTCGAAG
AGCTGTATCAATATCATAACACTTGACAATCATTCAGCGTGAAACTGACA
GTAGTGTAATTTTTACTGACAAATAAAATTCGCGTTTACGAATCGCTTAA
GTCCATGAAACGTAAATTAAAAAAGGACAGTGACAAGAAATCTTTTAAGA
AAGCATTGGAAATTTCTAGGAAGACGTGTTGTTATGAATGGAAAAATGTG
TATATTTAACCTTTTGTGTTTGAATTTAGCAATTTTCTGACTCTGTTCAA
CATATCTAAAGCTTAACTCTTTTCAGAGAAAGAAAATAATGCATATTTGT
TGGAAATTGATATTGTATCTTCATGTGGCGTGCACTGTGCTATTGATATT
GGGTCTGTTAATTCGTGATATTTTGAAGTATAGAGCAAGGTACATctcaa
aatttcttcttcttttgccTTTTTTATAATTAGATGTTTCAATTTTGTAA
ATCCTTTTGGTACTATTTGTTCAGGCGAAGAAATCTAAATGATGACATTG
AGGACGTTTGATCTACGGATGGTTTTGCGTTATGTGGGCAGTAATTTTag
gatgaaatatttattttatgatATACAAATTCGTGTTAAAGAAAACAATG
TAGTAATTTAAATGATGACACTGAGGACGTTTGATCTACGGATGGCTTTG
TGTTATGTGGGCAGTAATTTTAagatgaaatatttattttatgatATACA
AATTCGTGTTAAAGAAAACAATGTAGTAATTTAAATGATGACACTGAGGA
CGTTTGATCTACGGATGGTTTTGCGCTATGTGGGCAGTAATTTTaggatg
aaatatttattttatgatATACGAATTCGTGTTAAAGAAAACAATGTAGT
AATTTAAATGATGACACTGAGGACGTTTGATCTACGGATGGTTTTGCGCT
ATGTGGGCAGTAATTTTaggatgaaatatttatttcattatATACGAATT
CGTGTTAAAGAAAACAATGTAGTAATTTAAATGATGACACTGAAGACGTT
TGATCTACGGATGGCTTTGTGTTATGTGGGCAGTAATTTTAAgatgaaat
atttatttatgatatacaAATTCGTGTTAAAGAAAACAATGTAGTAATTT
AAATGATGACACTGAGGACGTTTGATCTACGGATGGTTTTGCGCTATGTG
GGCAGTAATTTTaggatgaaatatttattttatgatATACGAATTCGTGT
TAAAGAAAACAATGTAGTAATTTAAATGATGACACTGAGGACGTTTGATC
TACGGATGGCTTTGCGTTATGTGGGCAGTAATTTTaggatgaaatattta
ttttatgatATACAAATTCGTGTTAAAGAAAACAATGTAGTAATTTAAAT
GATGACACTGAAGACGTTTGATCTACGGATGGCTTTGTGTTATGTGGGCA
GTAATTTTaggatgaaatatttatttcattatATACGAATTCGTGTTAAA
GAAAACAATGTAGTAATTTAAATGATGACACTGAGGACGTTTGATCTACG
GATGTATACAAATTCGTGGCAATTCGTTATTTTGGACAACCATCAATGTG
TTACagcatttgaaaatttgaaatttgattgctCAGGTGTAATACTTAAA
AAATTAGTCGAGTTTCTAAAGTTTACTTAAAACAAAATCACTTGAGAAAT
TATCGCAAAAGTCAAAAGTCACTTATTTACTATAACATTATACAGAATCA
ACACACACCCGTCTAATTTTTGTAGACACACTTCAGGatcacacttttga
attttagtaTGCTATATTTCAGGATTCCAGTGTTATGGAAATAAACACTA
TAACATAATAACACTAATTTTTCCTCCCTTTTCTATTGCTTTGAAAAAAG
TACAGCGTCTTTATTtcgtccaattttttaaattggccttTAATGTACTT
AAATCAAAGAAATAACAAGTGGGGTTGACGAAATAATTGACAACGATTAA
ATTGTTTAGTAATCGGTCGCCTAATGAATAtaacttttgtagaaaaattt
tcagattttgtcgccatttgcttggttctttaacactcaaaAGAAACCCA
AAAGATTAAAGCGTGTTATAAGAAGCTATAAAGCTTCTAAAAATATTCTA
TAAAGCTtcctcttataaaaagacagctacagctatgcaaaataaacaaa
ataaaccaaaacgtgTTATGTAAAACACATCCAACTCTTTGGATGTGACC
AGTTCGAATTTCAAGGGAaggcattttttcgaattacagagagaattttg
acccacgcaaaaattttgacccacgcaaaaattttgacccacgcaaaaaa
taatgacccacgcaaaaaatatgacccacgcacaaaatatgacccacgca
aaaaataatgacccacgcaaaaaatatgacccacgcacaaaatatgaccc
acgcaaaaaataatgacccacgcaaaaattttgacccacgcaaaaaattt
aacccacgcaaaaaatatgacccacgcaaaaaatttgacccacgcgaaat
tttgacccacgcaaaaaattctttgacccacgcacccacgcaaaaaaatg
acccacgcaaaaatatcgacccacgcacccacgcaacccacgcaatttag
cagactcagaAAAAGTCAAACCGTAAAAAACGtcttgaaaagtcaaaaag
tttcttgaatgggcggatgggtggAGAAGTTGGAGAGAAACATTAACATT
AATTATGGACCCACTTAACATGTCATTCATTGTATACATCGTTACAAAGA
AAGCCCCGATTGAAGTGGTTTTTGTGAGGAAAGGCATGGCTGACTATTAT
ATCGTTTTGACAATGGAACTTTCAGAATGagatatattcaatttttgctC
TTCAAACATCTCTTTTTTATTTCCTTATCCCCATTTTCTTTCGAATTTTG
TAGGCAGGATGAACAACCAACAATTACGAGCAAGACACCAAAGAGACTTG
CAATTAATTGCCACCCTAAGGAGAGCCAGAAACCAATATCGAAATCTTAT
GGCTGATTGTTACATCGATTTTACAATGGAACCTTTAGATAAGTTTAGTT
TTTacttcttaaatattttcaaaacttacaCAATTCAacatatttttaat
ttctttatgcccttttttgacttttgtagaCTGAACAACCAACAATTAGG
ACGGAAAAGTCTACTCGAGAGGGTGTATCTAAAGAATcttttttactaaa
aatagacaaaaagaacgacaaatttcgccATCCACAGCCCCGATCGAAAG
TGACTGTGGCCTATACACGTCTACAGAAAATCAACCAGCTTCAGCAAGTA
AGTCGACTTTTTTTCGATCTATAATATACGGCACCCCAAAAAAGATTGAT
AGTTGACACTGAAAGAAAGGAAAGGCAAATGTTAGCGATTTTAAAACAAG
AGCaaagaggaaaattttttataagaaatcaaagatTCTCGTCAACATAG
ATAACAACGACAGATTCAGGATACTCAGGTTCAACAAAATAATGAAGAAG
TGACGGCGAAGATATGCAGTAAAGAGACATCGTTTGACgaagaaagaaat
atttcttatgGCCGTGGTTATGCCTTTCGCACATCCCACTAGCAGCAATC
TCCACCACTTGCCGCATATACGGCCCGGTGCCATCAGGACAGCAAAATGG
CCAAGATGGGGGCCTGACCAGGTATATCATTGACCGTCTGCTGAGGATGT
AAGGTAAGATTGCCTTGAATCTAGCAACAAATCAGCTCAACTCGCGATGC
CTTTTGTCTTAGTATATAGTATGCAGCTGAGAGGAAATAAGGCTGTAACC
TTAAAATTAATGTAAGTCTCTATTCAATAGGTTTAATTTTTCGGTTTTTA
CACTTTACTCTTTCATTAAATAAGCCaacttagaaaaaaggtttATGGGG
TTTAAAAATGTACAAATCACCTAGCAAACAAACAAAACACTCCTGCTGCT
CCTGAAATCCGACATCCACCTGTTTTATACTACTGTACTGCTGATCAACA
ACATCAACACCACAAGAAACACTGAATATTGAATGAcattcagtttcaaa
attaacATATCTTCTTTTAATATTCCAGCCAATCCCATTTGAAGACATTA
ATACCATCTTTATGAACGTCGTCTTCAGGAAGAGAATAGGACAACAAAAG
ATGGTTTTCAGAGTGAGACTCATCCCAATTCGAAAGGATAGAAACAAAGC
AAGTTATTTCGGTTGTAAAGAGTGCTCGATGTCAACAAAAAGTCGAAGAG
CTGTATCAAtatcataattttatttgtctTACACTTGATTTGTTTTACAC
TTGACAATCGTTCAGCGTGAAACTGACAGTAGTGTAATTTTTTACtgaca
aataaaattatgataTTAATTCGAAAGGTACAAAGAAATGCTCGTATCTC
GGGGTATCTGCAATAGCTTCCACTCCCCATTAGCAGCCGATATTTTCAGG
GGCCAAAAGGTACATGGTCACCAGAAACTGTGTGACTTGCCTTTAATCTA
GTAACAAACCGGCTCGACTCGTGAAGCCTTTAACTTGTAGGATGAACAAC
CAAGAGTTACGTGctcagtagcggcctggcttaaatttcttggtggtgca
aactatgaaactGGCGCCCCTGGtgtttttgtccttatttgcgccctcca
tcattaagtgaaaatattaaactgtaagagcagtgactgtttgaaagtaa
cgcccctaatctttgaaatggaaattttatacctggtaagtcgatttagt
ctacatttttgctttctaaaactgttatcagaaaaattaccaGATAATAT
TTAAACTTTCGCACCACTGGCCTTACTTTACTCTCTACTAAAGATCAATG
GCTAGATAGTGATTTAGAACTGATTTCGAACGGGATAATTCAATCAACAA
GCACACAACCACATTATAATTTGAGATCGAACCTGTCATTTTTCGGAAAG
TTTTTATCTGTATCGagcacaaaaaaatatttaacgaGATTATTGAACAT
GTTCGAATACATATACATCAACTGGAGCTTTTTCTTTTCGTTGCTTTTTT
AATCTCAAGCTGTATGGTATTTATTTTGATTGGTGATTGTTCGTTGGTCA
TTGTTGTTGGTTCATCTTTCATCAATTTCAACATTTACAGAATAGATCGG
AGAAGAGTAAAACGGGTGGCAAATGTATCAATATGAGTTGTGAGAAAAAC
ATTAACATTTAGCATGGTCCCACTTAACATTTCATTCATTGTATACAGAG
AAAGCCCCGATAGAAGTGGTTTTTGTGAGGAAATGCATGGCCGACTGTTA
CATCGTTTTAACAATGGAACTTTCAGAAtgagataaattaaatttttact
cTTCAAACATCTCAtgggattttttttatttccttatccccattttcttt
tgaattttgtaGGCAGGATGAACAACCAACAATTACGAGCACGCCATCAA
AGAGATGTGCAACTAATTGCAACCCTTAGGAGAGCCAGAAACCAGTACCA
TAATCTTATGGCTGATTGTTACATCGATTTTACAATGGAACCTTTAGGAT
GAGATAAGTTTAGTTTTTacttcttaaatattttcaaaacttacaCAATT
CAacatatttttaatttctttatgcccttttttgacatttgttgaCTGAA
CAACCAACAGTTACAAAGGAAAAGTCTACTCGAGAGGGTGTATCTAAAGA
ATCTtttattactaaaaatagacaaaaagaacgacaaatttcgccATCCA
CAGCCCCGATCGAAAGTGACTGTGGCCTATACACGTCTACAGAAAATCAA
CCAGCTTCAGCAAGTAAGTCGACTTTTTTTCGATCTATAATATACGGCAc
cccaaaaaactttttcataatttaatcGCAAGATTGATAGTTGACACTGA
AAGAAAGGAAAGGCAAATGTTAGCGATTTTAAAACAAGAGCaaagaggaa
aattttttataagaaatcaaagatTCTCGTCAACATAGATAACAACGACA
GATTCAGGATACTCAGGTTCAACAAAATAATGAAGAAGTGACGGCGAAGA
TATGCAGTAAAGAGACATCGTTTGACgaagaaagaaatatttcttatgGC
CGTGGTTATGCCTTTCGCACATCCCACTAGCAGCAATCTCCACCACTTGC
CGCATATACGGCCCGGTGCCATCAGGACAGCAAAATGGCCAAGATGGGGG
CCTGACCAGGTATATCATTGACCGTCTGCTGAGGATGTAAGGTAAGATTG
CCTTGAATCTAGCAACAAATCAGCTCAACTCGCGATGCCTTTTGTCTTAG
TATATAGTATGCAGCTGAGAGGAAATAAGgctgtaacctaaaaaaataaT
GTAAGTCTCTATTCCATAGGTTTAATTTTTCGGTTTTTACACTTTACTCT
GTCATTAAATAAGctaaacttagaaaaaaggtttATGGGGTTTAAAAATG
TACAAATCActtaacaaacaaacaaaacactCCTGCTGCTGCTCCTGAAA
TCCGACAGCCACCTGTTTTATACTACTGTACTGGTAATCAACAACATCAA
CACCACGCGTTTATTTGGCACATAAGAGTAATCAACAGCACAATGTTTAT
ACGTCAGTTAGTCTTTATTCTTTAGagttaaatttttcagtttctacttt
ttatcaaaataaaccaaattttaaaaatgcaaaattttgcaACGGCGAAG
AAGATGCAACAAAGAGTGCCATTAGGACAACAAATTGGCCAAGATGGGGG
CCTGGCCAGGTACCTAATTGACAGTTTACTATAAATGTTAACATTTATAA
GCCATATGTAAAGAAATATTAAGCACTCTTTCAAACTATAAACCGTTTAA
CCATACTCAAATTACTTCAAAAAGAGGGGTAAAAGAGTCTCAATATTGAA
TGAcattcagtttcaaaattaacATCTCTTCTTTTAATATTTCAGCCAAT
CCGATTCGAAGACATAGATACGATCTTTATGAACGTCGTGTTCAGGAAGA
GAGTGGGGCAACAAGAGATGGTTTTCAGAGGGAGCCTCATCCTAATTCGA
AAGGTATAAAGAAATGCTCGTATCTCGGGGTATCTGCAATAGCTTCCACT
TCCCATTAGCAGCCAATATTTTCAGGTGCCAAAAGGCAAGGTCACCAGAA
ACTGTGTGACTTGCCTTTAATCTAGTAACAAACCGGCTCGACTCGTGAAG
CCTTTAAATTGTCTTGGTATAATATGCAGCTGAGAGAAAATGAGGCTGTA
ACTTTTAATAGAATTCAAATTAGATAGTTATTTCGATCTTACGGGATAAT
TCAATCAACAACCACACAACCGCATATTCCGGATTTAATCTTACGTCTTT
GTCTCCTCTGCAAATCATTTTGATATGCACTTTAGCTCCAGTAAATTATC
CTGAGTCTGAACCTTAATGCCACTGTAGTACGGGGACATTCAAGTGCTTG
AAAAAACCACATAACGTATGCAAAAGTTTTCTAAATATTTAAGATCCCTT
TGTATGCAGAGAAAAGGAAACTGGGATGACTGCATTTGATGAAAGACGTA
CACTTTTGCTGAACCCCCGCTGCCCCCTTCATTGTGTATGTACTATATGA
CCCCCCTATATCATCCTCCACCATCAAACTTAGAGGGATTTAGAATCTTT
TTAGACGACTTGAATCATCCTGATCCAGCCTGATCAATTATCAGTTATTG
GTAGAATTCTAAACTTATTTTCTCAATATGGCATACATTATCTTTTATCA
AATATCTTCATTCCAGACGGACAAATGTTCCTATTGGTCGCAGTTGTTAT
CCCGTCCAACCCTCTCCATTTGCTGCCTATATGGCCTCCGTGCCATTAGG
GCAGCAAAATGGCCAGGATGGGGGCCTGACCAGGTATTTGATTGACCGTT
TGCTGATGATGTAAGCATAGTGGgcaacacccctccaacccccacctgaa
aaaggtcacccccacctacatagggttacccccacctgaaatctcATATC
AGCCCAACCCCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccctgaatc
caggggggggtgcccactatgGTAAGGTAAAATTGCCTTAAATTTAGCAA
CAAATGGGGTCGACTTGTGATACCTTAGACTTGTCTTAGTATAAtgtacg
ctttttttataagaatatctttcataaaaatatagcCTGTTAATCAGTGT
TAATTACTTTCTTATATGTTTTACATAgtaaaatttgttcaaatttttta
ttcacaCATCTGATGATCGTCTCTGGCGAGAAACAGtatgtaaattttga
ttttttttttaagaaaaataaattttgagaaatttctgAAATAATTAAGA
ATATTCACcctttttaggcaatttctcgcAAAAACCGCAAAATGAAGTTC
CCCAAAAATtacttcccttaaggtattataGAACAGATTTACAAATGATA
TAATGTCTCTTGTGATACTTTATTATATTAGTTCACAACATTGAACAGCA
GCTCATCAGCAGACATCGTGAGTTTTCGACGATTTTCATGTctgattgta
aatattttcttaaaacaGATTATGAAAGGCATCCGAACCGATTGAACCCC
GGTGAAGCAGCTCATCAACAGACCTAAGCTCAAGATCGAAGTTTTCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036300XLOC_036300Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057563-exon-scaffold_293-1491911889:164275..164405TCONS_00057563-exon-scaffold_293-1491911889:164275..164405Clytia hemisphaericaexon
TCONS_00057563-exon-scaffold_293-1510915933:164275..164405TCONS_00057563-exon-scaffold_293-1510915933:164275..164405Clytia hemisphaericaexon
TCONS_00057563-exon-scaffold_293-1575043694:164275..164405TCONS_00057563-exon-scaffold_293-1575043694:164275..164405Clytia hemisphaericaexon
TCONS_00057563-exon-scaffold_293-1491911889:177456..177622TCONS_00057563-exon-scaffold_293-1491911889:177456..177622Clytia hemisphaericaexon
TCONS_00057563-exon-scaffold_293-1510915933:177456..177622TCONS_00057563-exon-scaffold_293-1510915933:177456..177622Clytia hemisphaericaexon
TCONS_00057563-exon-scaffold_293-1575043694:177456..177622TCONS_00057563-exon-scaffold_293-1575043694:177456..177622Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_293supercontigscaffold_293:164275..177622 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19381	0.7761	0.450563	0.440806	0	0	1.02322	0.478962	3.01799	1.66145	3.62846	4.24037	9.52756	7.97054	7.23075	4.36483	7.76695	7.04231	5.07617	8.85308	3.07797	3.94099	4.10639	2.90368	4.27246	3.43176	6.00214	5.24098	4.85845	5.39999
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057563 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top