TCONS_00057485 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057485
Unique NameTCONS_00057485
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057485 ID=TCONS_00057485|Name=TCONS_00057485|organism=Clytia hemisphaerica|type=transcript|length=189bp
TTCAGTTTTTGTAAAGAGAATATTCCATTTAGGAATGATTTTTGAAGCTG
TTCTAGCCGTTGCATTTGGTGTCTCTTGGATGGTGACCATAGCTGTGCAC
AGTAATCAATGTGAGGGATTGCCAATGTCTTCCATAGGGTCAGCATTACA
GTAGGGTcccttgttttgaaagttcgaTATATCCATGAA
Run BLAST on NCBI

transcript from alignment at scaffold_289:27421..27609

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057485 ID=TCONS_00057485|Name=TCONS_00057485|organism=Clytia hemisphaerica|type=transcript|length=189bp|location=Sequence derived from alignment at scaffold_289:27421..27609 (Clytia hemisphaerica)
TTCATGGATATAtcgaactttcaaaacaagggACCCTACTGTAATGCTGA
CCCTATGGAAGACATTGGCAATCCCTCACATTGATTACTGTGCACAGCTA
TGGTCACCATCCAAGAGACACCAAATGCAACGGCTAGAACAGCTTCAAAA
ATCATTCCTAAATGGAATATTCTCTTTACAAAAACTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036226XLOC_036226Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057485-exon-scaffold_289-1491911889:27421..27609TCONS_00057485-exon-scaffold_289-1491911889:27421..27609Clytia hemisphaericaexon
TCONS_00057485-exon-scaffold_289-1510915933:27421..27609TCONS_00057485-exon-scaffold_289-1510915933:27421..27609Clytia hemisphaericaexon
TCONS_00057485-exon-scaffold_289-1575043694:27421..27609TCONS_00057485-exon-scaffold_289-1575043694:27421..27609Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_289supercontigscaffold_289:27421..27609 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057485 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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