TCONS_00057450 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057450
Unique NameTCONS_00057450
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3000

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057450 ID=TCONS_00057450|Name=TCONS_00057450|organism=Clytia hemisphaerica|type=transcript|length=3000bp
CCTGCCCAAAGAGGGGTCTATATCATAAAGAATTGAATCATTCTAAGGTG
CTCACATCTTTCTTGATCTTACTTCTTGTCGTCTTCTCCTGTTTATCTGA
ACTTCACTATTATTAAAAATTACACCGTGTTTAATTCAGCTTGATAGTGA
CCTTCTCCTATCAATGATGTGAGTAATCTGAGCAAAATATGGGCTCCAAC
TCTAAAAGCTGTTAGTTATACTAAGATTTCCAGGTTTCTTCCAAAAGAAG
AGGAGCAGTTAAAGGCTATGCTAGCATGTAGCAACATCAAATATATTGGG
AGTTACCTGAAAACCCTATTGTGCATTTTATCACCACATAGTGTTAAtca
aaaaggattgaagattgagattctgaaaaaagtttgtatgtaaagatgaa
tgaatgaatgccCAGAAGAAGTTAGTTTAAATTATCATTCAACTTGTGTC
TTCTTTTCCAACAAAAGCCAACATTTTAACAGACATTCTAACTTGCATTG
CTTGGTATTTGGCTATTGTCAATGCAAATATCAATGCAAATTTGGCTTTA
GCTGACGTAAACGTGCTTACTGTActataaaactcaaaattttttgGTGA
CACTGTTTCCTTTtcattgataattcaaaatgtatttttgttttccagat
cagaaaattaaaaaaagtatgACACAGTAAAGTTAAAGACTCTTTGAGAA
GCTAAATGGCTGCTAGAAATTTAGCCTTCAATGACAGGATTGAAGAGAAT
GCTGTTCAAGTATTTCTTGGAGAATCTGTTCTGGCTAAAGCCAATGTTAA
TAGACTTAACATTATGGGTTCCAGGAACAGTGGTGCAAGGGGAACATTGT
TTGTGACTAATTTCAAGGTAGCTTTCACTTCAAACTGTGGAGGTGGATAC
GATTTCAAGAAACCATCTAGTCTTGATAAACTTCTTTCGGAAGAAGTTGA
TGATAAGGATGATATCATTCCATTGACTGTCATTGAACATCTGTTTGCTA
TATCCACTTCTAAACAAAAGCGAAAGAAGATCAAAGATGCCAGCAAGGAA
CTGTCCTCAAATTATGACATTATTGAAATAGTAACCAAAGACTTTCGTAT
TATTCAATACGACTTTAAATTAACATCAGAGGAGAGTCGTAAACCCCTCA
TCAAGATGCTGTCACATTACTCCTTTCCCACAGCCTTATCACGATTGTTT
GCttttgattatggaaaaaagGCTTGGCAGCCTAATACAAATCTTACAGA
AAGAGCATTTTGTACATATTCACACGCCAAAGATTATGAACTCGATTTGA
ATAGACTAGGTGCTTCAGAACAGTGGAGAGTATCAAAAGTTAATGTCGAA
TATCGTTTATGTAAGAGCTTGCCTCAGTATAATGTATGTCCTGCATCTCT
GGATGATGAAAGCATTATCGTTGCAGCATCCAAGTACCCCAACAATAGAT
TCCCTGTTTGGTTGTGGAGTGATTCGTCAACCGGTGCTGCTTTATTACTC
TCGTCTCAGTTAAAAAATGATACAAGCTTAACAATGCACGAGCACCCTGT
TACAATCACAGAATCTATTCGCAACAAAGGGCACACTACTGGCGAAACAA
TATCCATTGACATTGGTTCCCCATGTCCAACATTAAAACAGCTGAAAAGC
AGCTTCAAAAAGCTGAAAAGAGAATGCATTTTTCGATCTAGTAAAGATTT
TTGGGAGTCTGATAGTAGTTGGTTAGGTGACATTGAACAGACTGGTTGGT
TATCTCACGTTTCAAGCTGTTTGGAACTTGTCCACGACATCATAAAAAAG
ATTAACGAGAAACAAACATCAGTGATAGTCTGTGACCCTGATGGACGCCA
TTTTGCTATTTTGATTACATCATTGGTTCAAATCCTCCTTGATCCTTATT
ACAGATCTTTAATGGGTCTTCAAGCGCTCATTCAAAAAGATTGGGTCATG
AAAGGTTTTCCATTCTGCCAACGTCTTCATCACATTAGCGAGAGCTCGAA
ATCAACAATTGGTAGTCAGATCAGAACAGCTTCATTCAAAGGAAAAGATG
AACGACGAGACAAGGATTTAACCTATGAAGGAGAAAGCCCtgtttttgta
ttgtttttagAATGTCTTCATCAGTTGATCAGACAGCATCCGCTGGAGTT
TGAGTACACAGAGCAGTTTCTCGTCCTGCTTTATGATGCATCGTATTCTT
GTTTGTTTGGTACTTTTCTATTCAACAGCTCTTATGAATTAGATGAAAGC
CAAAAGGAATCTAATCTAATGACAGTTTGGGACTTCATTGCCACCAATAT
ACCTCAATCAAAATATATATCAGTTTTTACAAATGCTAGTTATAAACTTG
ACTTGGAGCAGGATATCGACCTTACAGATGGTGGATTAACATCAAACATG
CAGAGAAAGATGAGCTTACATTTGGAGCATAGAAACTCTGTTATAACAGA
TATAGTATCAGCCATACCAAGGCTTTTAATATGGAACTCTCTTTTCTTTC
GCTGGCTACCGTGCACTGATTTCCACAAGGGATGTAGTCGAGAGGTAGTT
TTACAGTTGCAACAAATCCAATACATGGATGAGATATATTATTTGAAAGA
CCGGCTCAACCAACTACAACAGCAGATGCAACCTAGAGATTTTCTTTCAC
CAGAGCCTGACTCCTCCACTAGGAACAAGAAGCGCCATAAACGTAACGCA
AGTCGTTTTAGCAATAATGAAGAAGTAAGAGATGATTTTTTGATAATTAT
GACCGGTTTTCACTTTCTGAAGATGCTCTgatttaatcaaattttctatt
tttttataggTTTATCACAAAATATTTATTGTTTTATCGAATTGATTTTA
TTACTGAATTTGGATTATATTTTCAAATACACAAGTTGCACTTCAAAATG
AAAGCAaacttattgaaaaaatatgaagagTTATTGCTATCTCTTTTTTT
GTTGATTATACATTATTTGCAAAATAAACCTTTCCAGTTTTGATTGAAAG
Run BLAST on NCBI

protein sequence of TCONS_00057450-protein

>TCONS_00057450-protein ID=TCONS_00057450-protein|Name=TCONS_00057450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=691bp
MAARNLAFNDRIEENAVQVFLGESVLAKANVNRLNIMGSRNSGARGTLFV
TNFKVAFTSNCGGGYDFKKPSSLDKLLSEEVDDKDDIIPLTVIEHLFAIS
TSKQKRKKIKDASKELSSNYDIIEIVTKDFRIIQYDFKLTSEESRKPLIK
MLSHYSFPTALSRLFAFDYGKKAWQPNTNLTERAFCTYSHAKDYELDLNR
LGASEQWRVSKVNVEYRLCKSLPQYNVCPASLDDESIIVAASKYPNNRFP
VWLWSDSSTGAALLLSSQLKNDTSLTMHEHPVTITESIRNKGHTTGETIS
IDIGSPCPTLKQLKSSFKKLKRECIFRSSKDFWESDSSWLGDIEQTGWLS
HVSSCLELVHDIIKKINEKQTSVIVCDPDGRHFAILITSLVQILLDPYYR
SLMGLQALIQKDWVMKGFPFCQRLHHISESSKSTIGSQIRTASFKGKDER
RDKDLTYEGESPVFVLFLECLHQLIRQHPLEFEYTEQFLVLLYDASYSCL
FGTFLFNSSYELDESQKESNLMTVWDFIATNIPQSKYISVFTNASYKLDL
EQDIDLTDGGLTSNMQRKMSLHLEHRNSVITDIVSAIPRLLIWNSLFFRW
LPCTDFHKGCSREVVLQLQQIQYMDEIYYLKDRLNQLQQQMQPRDFLSPE
PDSSTRNKKRHKRNASRFSNNEEVRDDFLIIMTGFHFLKML
Run BLAST on NCBI

transcript from alignment at scaffold_289:33943..37333+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057450 ID=TCONS_00057450|Name=TCONS_00057450|organism=Clytia hemisphaerica|type=transcript|length=3391bp|location=Sequence derived from alignment at scaffold_289:33943..37333+ (Clytia hemisphaerica)
CCTGCCCAAAGAGGGGTCTATATCATAAAGAATTGAATCATTCTAAGGTG
CTCACATCTTTCTTGATCTTACTTCTTGTCGTCTTCTCCTGTTTATCTGA
ACTTCACTATTATTAAAAATTACACCGTGTTTAATTCAGCTTGATAGTGA
CCTTCTCCTATCAATGATGTGAGTAATCTGAGCAAAATATGGGCTCCAAC
TCTAAAAGCTGTTAGTTATACTAAGATTTCCAGGTTTCTTCCAAAAGAAG
AGGAGCAGTTAAAGGCTATGCTAGCATGTAGCAACATCAAATATATTGGG
AGTTACCTGAAAACCCTATTGTGCATTTTATCACCACATAGTGTTAAtca
aaaaggattgaagattgagattctgaaaaaagtttgtatgtaaagatgaa
tgaatgaatgccCAGAAGAAGTTAGTTTAAATTATCATTCAACTTGTGTC
TTCTTTTCCAACAAAAGCCAACATTTTAACAGACATTCTAACTTGCATTG
CTTGGTATTTGGCTATTGTCAATGCAAATATCAATGCAAATTTGGCTTTA
GCTGACGTAAACGTGCTTACTGTActataaaactcaaaattttttgGTGA
CACTGTTTCCTTTtcattgataattcaaaatgtatttttgttttccagat
cagaaaattaaaaaaagtatgACACAGTAAAGTTAAAGACTCTTTGAGAA
GCTAAATGGCTGCTAGAAATTTAGCCTTCAATGACAGGATTGAAGAGAAT
GCTGTTCAAGTATTTCTTGGAGAATCTGTTCTGGCTAAAGCCAATGTTAA
TAGACTTAACATTATGGGTTCCAGGAACAGTGGTGCAAGGGGAACATTGT
TTGTGACTAATTTCAAGGTAGCTTTCACTTCAAACTGTGGAGGTGGATAC
GATTTCAAGAAACCATCTAGTCTTGATAAACTTCTTTCGGAAGAAGTTGA
TGATAAGGATGATATCATTCCATTGACTGTCATTGAACATCTGTTTGCTA
TATCCACTTCTAAACAAAAGCGAAAGAAGATCAAAGATGCCAGCAAGGAA
CTGTCCTCAAATTATGACATTATTGAAATAGTAACCAAAGACTTTCGTAT
TATTCAATACGACTTTAAATTAACATCAGAGGAGAGTCGTAAACCCCTCA
TCAAGATGCTGTCACATTACTCCTTTCCCACAGCCTTATCACGATTGTTT
GCttttgattatggaaaaaagGCTTGGCAGCCTAATACAAATCTTACAGA
AAGAGCATTTTGTACATATTCACACGCCAAAGATTATGAACTCGATTTGA
ATAGACTAGGTGCTTCAGAACAGTGGAGAGTATCAAAAGTTAATGTCGAA
TATCGTTTATGTAAGAGCTTGCCTCAGTATAATGTATGTCCTGCATCTCT
GGATGATGAAAGCATTATCGTTGCAGCATCCAAGTACCCCAACAATAGAT
TCCCTGTTTGGTTGTGGAGTGATTCGTCAACCGGTGCTGCTTTATTACTC
TCGTCTCAGTTAAAGTAAGTATGAAGAAGACTAATGTAAAAAGGGCCCAT
TCTATTTCTTACTTTCTTGGCAGAAAGATGTTCCTTCTTAGACACTTGTT
GATTTAGGTacattttatagatttttttttctttggttttgatttttttt
aaggattaattctttttaaaggtgTAACAGAAGTCCATAAACAATGATGA
ATCTTTGAGATATCGCctgattttgattgttgtttatataaaaaagaaga
GTTTATAAGTCAATTGTCTTTCTTCTTGGTTTAGAAATGATACAAGCTTA
ACAATGCACGAGCACCCTGTTACAATCACAGAATCTATTCGCAACAAAGG
GCACACTACTGGCGAAACAATATCCATTGACATTGGTTCCCCATGTCCAA
CATTAAAACAGCTGAAAAGCAGCTTCAAAAAGCTGAAAAGAGAATGCATT
TTTCGATCTAGTAAAGATTTTTGGGAGTCTGATAGTAGTTGGTTAGGTGA
CATTGAACAGACTGGGTAAGTTAGTTTGTCTTAGCTCTAGCAACCCTTAT
TAGGTTCTTTAGCAAAATTTATCTTCGGACCATGAAGCTATAACTGGTCC
CAAATTTACatcttttttccatttttcttgtCACAGTTGGTTATCTCACG
TTTCAAGCTGTTTGGAACTTGTCCACGACATCATAAAAAAGATTAACGAG
AAACAAACATCAGTGATAGTCTGTGACCCTGATGGACGCCATTTTGCTAT
TTTGATTACATCATTGGTTCAAATCCTCCTTGATCCTTATTACAGATCTT
TAATGGGTCTTCAAGCGCTCATTCAAAAAGATTGGGTCATGAAAGGTTTT
CCATTCTGCCAACGTCTTCATCACATTAGCGAGAGCTCGAAATCAACAAT
TGGTAGTCAGATCAGAACAGCTTCATTCAAAGGAAAAGATGAACGACGAG
ACAAGGATTTAACCTATGAAGGAGAAAGCCCtgtttttgtattgttttta
gAATGTCTTCATCAGTTGATCAGACAGCATCCGCTGGAGTTTGAGTACAC
AGAGCAGTTTCTCGTCCTGCTTTATGATGCATCGTATTCTTGTTTGTTTG
GTACTTTTCTATTCAACAGCTCTTATGAATTAGATGAAAGCCAAAAGGAA
TCTAATCTAATGACAGTTTGGGACTTCATTGCCACCAATATACCTCAATC
AAAATATATATCAGTTTTTACAAATGCTAGTTATAAACTTGACTTGGAGC
AGGATATCGACCTTACAGATGGTGGATTAACATCAAACATGCAGAGAAAG
ATGAGCTTACATTTGGAGCATAGAAACTCTGTTATAACAGATATAGTATC
AGCCATACCAAGGCTTTTAATATGGAACTCTCTTTTCTTTCGCTGGCTAC
CGTGCACTGATTTCCACAAGGGATGTAGTCGAGAGGTAGTTTTACAGTTG
CAACAAATCCAATACATGGATGAGATATATTATTTGAAAGACCGGCTCAA
CCAACTACAACAGCAGATGCAACCTAGAGATTTTCTTTCACCAGAGCCTG
ACTCCTCCACTAGGAACAAGAAGCGCCATAAACGTAACGCAAGTCGTTTT
AGCAATAATGAAGAAGTAAGAGATGATTTTTTGATAATTATGACCGGTTT
TCACTTTCTGAAGATGCTCTgatttaatcaaattttctatttttttatag
gTTTATCACAAAATATTTATTGTTTTATCGAATTGATTTTATTACTGAAT
TTGGATTATATTTTCAAATACACAAGTTGCACTTCAAAATGAAAGCAaac
ttattgaaaaaatatgaagagTTATTGCTATCTCTTTTTTTGTTGATTAT
ACATTATTTGCAAAATAAACCTTTCCAGTTTTGATTGAAAG

Coding sequence (CDS) from alignment at scaffold_289:33943..37333+

>TCONS_00057450 ID=TCONS_00057450|Name=TCONS_00057450|organism=Clytia hemisphaerica|type=CDS|length=6228bp|location=Sequence derived from alignment at scaffold_289:33943..37333+ (Clytia hemisphaerica)
ATGGCTGCTAGAAATTTAGCCTTCAATGACAGGATTGAAGAGAATGCTGT
TCAAGTATTTCTTGGAGAATCTGTTCTGGCTAAAGCCAATGTTAATAGAC
TTAACATTATGGGTTCCAGGAACAGTGGTGCAAGGGGAACATTGTTTGTG
ACTAATTTCAAGGTAGCTTTCACTTCAAACTGTGGAGGTGGATACGATTT
CAAGAAACCATCTAGTCTTGATAAACTTCTTTCGGAAGAAGTTGATGATA
AGGATGATATCATTCCATTGACTGTCATTGAACATCTGTTTGCTATATCC
ACTTCTAAACAAAAGCGAAAGAAGATCAAAGATGCCAGCAAGGAACTGTC
CTCAAATTATGACATTATTGAAATAGTAACCAAAGACTTTCGTATTATTC
AATACGACTTTAAATTAACATCAGAGGAGAGTCGTAAACCCCTCATCAAG
ATGCTGTCACATTACTCCTTTCCCACAGCCTTATCACGATTGTTTGCttt
tgattatggaaaaaagGCTTGGCAGCCTAATACAAATCTTACAGAAAGAG
CATTTTGTACATATTCACACGCCAAAGATTATGAACTCGATTTGAATAGA
CTAGGTGCTTCAGAACAGTGGAGAGTATCAAAAGTTAATGTCGAATATCG
TTTATGTAAGAGCTTGCCTCAGTATAATGTATGTCCTGCATCTCTGGATG
ATGAAAGCATTATCGTTGCAGCATCCAAGTACCCCAACAATAGATTCCCT
GTTTGGTTGTGGAGTGATTCGTCAACCGGTGCTGCTTTATTACTCTCGTC
TCAGTTAAAAAATGATACAAGCTTAACAATGCACGAGCACCCTGTTACAA
TCACAGAATCTATTCGCAACAAAGGGCACACTACTGGCGAAACAATATCC
ATTGACATTGGTTCCCCATGTCCAACATTAAAACAGCTGAAAAGCAGCTT
CAAAAAGCTGAAAAGAGAATGCATTTTTCGATCTAGTAAAGATTTTTGGG
AGTCTGATAGTAGTTGGTTAGGTGACATTGAACAGACTGGTTGGTTATCT
CACGTTTCAAGCTGTTTGGAACTTGTCCACGACATCATAAAAAAGATTAA
CGAGAAACAAACATCAGTGATAGTCTGTGACCCTGATGGACGCCATTTTG
CTATTTTGATTACATCATTGGTTCAAATCCTCCTTGATCCTTATTACAGA
TCTTTAATGGGTCTTCAAGCGCTCATTCAAAAAGATTGGGTCATGAAAGG
TTTTCCATTCTGCCAACGTCTTCATCACATTAGCGAGAGCTCGAAATCAA
CAATTGGTAGTCAGATCAGAACAGCTTCATTCAAAGGAAAAGATGAACGA
CGAGACAAGGATTTAACCTATGAAGGAGAAAGCCCtgtttttgtattgtt
tttagAATGTCTTCATCAGTTGATCAGACAGCATCCGCTGGAGTTTGAGT
ACACAGAGCAGTTTCTCGTCCTGCTTTATGATGCATCGTATTCTTGTTTG
TTTGGTACTTTTCTATTCAACAGCTCTTATGAATTAGATGAAAGCCAAAA
GGAATCTAATCTAATGACAGTTTGGGACTTCATTGCCACCAATATACCTC
AATCAAAATATATATCAGTTTTTACAAATGCTAGTTATAAACTTGACTTG
GAGCAGGATATCGACCTTACAGATGGTGGATTAACATCAAACATGCAGAG
AAAGATGAGCTTACATTTGGAGCATAGAAACTCTGTTATAACAGATATAG
TATCAGCCATACCAAGGCTTTTAATATGGAACTCTCTTTTCTTTCGCTGG
CTACCGTGCACTGATTTCCACAAGGGATGTAGTCGAGAGGTAGTTTTACA
GTTGCAACAAATCCAATACATGGATGAGATATATTATTTGAAAGACCGGC
TCAACCAACTACAACAGCAGATGCAACCTAGAGATTTTCTTTCACCAGAG
CCTGACTCCTCCACTAGGAACAAGAAGCGCCATAAACGTAACGCAAGTCG
TTTTAGCAATAATGAAGAAGTAAGAGATGATTTTTTGATAATTATGACCG
GTTTTCACTTTCTGAAGATGCTCTgaATGGCTGCTAGAAATTTAGCCTTC
AATGACAGGATTGAAGAGAATGCTGTTCAAGTATTTCTTGGAGAATCTGT
TCTGGCTAAAGCCAATGTTAATAGACTTAACATTATGGGTTCCAGGAACA
GTGGTGCAAGGGGAACATTGTTTGTGACTAATTTCAAGGTAGCTTTCACT
TCAAACTGTGGAGGTGGATACGATTTCAAGAAACCATCTAGTCTTGATAA
ACTTCTTTCGGAAGAAGTTGATGATAAGGATGATATCATTCCATTGACTG
TCATTGAACATCTGTTTGCTATATCCACTTCTAAACAAAAGCGAAAGAAG
ATCAAAGATGCCAGCAAGGAACTGTCCTCAAATTATGACATTATTGAAAT
AGTAACCAAAGACTTTCGTATTATTCAATACGACTTTAAATTAACATCAG
AGGAGAGTCGTAAACCCCTCATCAAGATGCTGTCACATTACTCCTTTCCC
ACAGCCTTATCACGATTGTTTGCttttgattatggaaaaaagGCTTGGCA
GCCTAATACAAATCTTACAGAAAGAGCATTTTGTACATATTCACACGCCA
AAGATTATGAACTCGATTTGAATAGACTAGGTGCTTCAGAACAGTGGAGA
GTATCAAAAGTTAATGTCGAATATCGTTTATGTAAGAGCTTGCCTCAGTA
TAATGTATGTCCTGCATCTCTGGATGATGAAAGCATTATCGTTGCAGCAT
CCAAGTACCCCAACAATAGATTCCCTGTTTGGTTGTGGAGTGATTCGTCA
ACCGGTGCTGCTTTATTACTCTCGTCTCAGTTAAAAAATGATACAAGCTT
AACAATGCACGAGCACCCTGTTACAATCACAGAATCTATTCGCAACAAAG
GGCACACTACTGGCGAAACAATATCCATTGACATTGGTTCCCCATGTCCA
ACATTAAAACAGCTGAAAAGCAGCTTCAAAAAGCTGAAAAGAGAATGCAT
TTTTCGATCTAGTAAAGATTTTTGGGAGTCTGATAGTAGTTGGTTAGGTG
ACATTGAACAGACTGGTTGGTTATCTCACGTTTCAAGCTGTTTGGAACTT
GTCCACGACATCATAAAAAAGATTAACGAGAAACAAACATCAGTGATAGT
CTGTGACCCTGATGGACGCCATTTTGCTATTTTGATTACATCATTGGTTC
AAATCCTCCTTGATCCTTATTACAGATCTTTAATGGGTCTTCAAGCGCTC
ATTCAAAAAGATTGGGTCATGAAAGGTTTTCCATTCTGCCAACGTCTTCA
TCACATTAGCGAGAGCTCGAAATCAACAATTGGTAGTCAGATCAGAACAG
CTTCATTCAAAGGAAAAGATGAACGACGAGACAAGGATTTAACCTATGAA
GGAGAAAGCCCtgtttttgtattgtttttagAATGTCTTCATCAGTTGAT
CAGACAGCATCCGCTGGAGTTTGAGTACACAGAGCAGTTTCTCGTCCTGC
TTTATGATGCATCGTATTCTTGTTTGTTTGGTACTTTTCTATTCAACAGC
TCTTATGAATTAGATGAAAGCCAAAAGGAATCTAATCTAATGACAGTTTG
GGACTTCATTGCCACCAATATACCTCAATCAAAATATATATCAGTTTTTA
CAAATGCTAGTTATAAACTTGACTTGGAGCAGGATATCGACCTTACAGAT
GGTGGATTAACATCAAACATGCAGAGAAAGATGAGCTTACATTTGGAGCA
TAGAAACTCTGTTATAACAGATATAGTATCAGCCATACCAAGGCTTTTAA
TATGGAACTCTCTTTTCTTTCGCTGGCTACCGTGCACTGATTTCCACAAG
GGATGTAGTCGAGAGGTAGTTTTACAGTTGCAACAAATCCAATACATGGA
TGAGATATATTATTTGAAAGACCGGCTCAACCAACTACAACAGCAGATGC
AACCTAGAGATTTTCTTTCACCAGAGCCTGACTCCTCCACTAGGAACAAG
AAGCGCCATAAACGTAACGCAAGTCGTTTTAGCAATAATGAAGAAGTAAG
AGATGATTTTTTGATAATTATGACCGGTTTTCACTTTCTGAAGATGCTCT
gaATGGCTGCTAGAAATTTAGCCTTCAATGACAGGATTGAAGAGAATGCT
GTTCAAGTATTTCTTGGAGAATCTGTTCTGGCTAAAGCCAATGTTAATAG
ACTTAACATTATGGGTTCCAGGAACAGTGGTGCAAGGGGAACATTGTTTG
TGACTAATTTCAAGGTAGCTTTCACTTCAAACTGTGGAGGTGGATACGAT
TTCAAGAAACCATCTAGTCTTGATAAACTTCTTTCGGAAGAAGTTGATGA
TAAGGATGATATCATTCCATTGACTGTCATTGAACATCTGTTTGCTATAT
CCACTTCTAAACAAAAGCGAAAGAAGATCAAAGATGCCAGCAAGGAACTG
TCCTCAAATTATGACATTATTGAAATAGTAACCAAAGACTTTCGTATTAT
TCAATACGACTTTAAATTAACATCAGAGGAGAGTCGTAAACCCCTCATCA
AGATGCTGTCACATTACTCCTTTCCCACAGCCTTATCACGATTGTTTGCt
tttgattatggaaaaaagGCTTGGCAGCCTAATACAAATCTTACAGAAAG
AGCATTTTGTACATATTCACACGCCAAAGATTATGAACTCGATTTGAATA
GACTAGGTGCTTCAGAACAGTGGAGAGTATCAAAAGTTAATGTCGAATAT
CGTTTATGTAAGAGCTTGCCTCAGTATAATGTATGTCCTGCATCTCTGGA
TGATGAAAGCATTATCGTTGCAGCATCCAAGTACCCCAACAATAGATTCC
CTGTTTGGTTGTGGAGTGATTCGTCAACCGGTGCTGCTTTATTACTCTCG
TCTCAGTTAAAAAATGATACAAGCTTAACAATGCACGAGCACCCTGTTAC
AATCACAGAATCTATTCGCAACAAAGGGCACACTACTGGCGAAACAATAT
CCATTGACATTGGTTCCCCATGTCCAACATTAAAACAGCTGAAAAGCAGC
TTCAAAAAGCTGAAAAGAGAATGCATTTTTCGATCTAGTAAAGATTTTTG
GGAGTCTGATAGTAGTTGGTTAGGTGACATTGAACAGACTGGTTGGTTAT
CTCACGTTTCAAGCTGTTTGGAACTTGTCCACGACATCATAAAAAAGATT
AACGAGAAACAAACATCAGTGATAGTCTGTGACCCTGATGGACGCCATTT
TGCTATTTTGATTACATCATTGGTTCAAATCCTCCTTGATCCTTATTACA
GATCTTTAATGGGTCTTCAAGCGCTCATTCAAAAAGATTGGGTCATGAAA
GGTTTTCCATTCTGCCAACGTCTTCATCACATTAGCGAGAGCTCGAAATC
AACAATTGGTAGTCAGATCAGAACAGCTTCATTCAAAGGAAAAGATGAAC
GACGAGACAAGGATTTAACCTATGAAGGAGAAAGCCCtgtttttgtattg
tttttagAATGTCTTCATCAGTTGATCAGACAGCATCCGCTGGAGTTTGA
GTACACAGAGCAGTTTCTCGTCCTGCTTTATGATGCATCGTATTCTTGTT
TGTTTGGTACTTTTCTATTCAACAGCTCTTATGAATTAGATGAAAGCCAA
AAGGAATCTAATCTAATGACAGTTTGGGACTTCATTGCCACCAATATACC
TCAATCAAAATATATATCAGTTTTTACAAATGCTAGTTATAAACTTGACT
TGGAGCAGGATATCGACCTTACAGATGGTGGATTAACATCAAACATGCAG
AGAAAGATGAGCTTACATTTGGAGCATAGAAACTCTGTTATAACAGATAT
AGTATCAGCCATACCAAGGCTTTTAATATGGAACTCTCTTTTCTTTCGCT
GGCTACCGTGCACTGATTTCCACAAGGGATGTAGTCGAGAGGTAGTTTTA
CAGTTGCAACAAATCCAATACATGGATGAGATATATTATTTGAAAGACCG
GCTCAACCAACTACAACAGCAGATGCAACCTAGAGATTTTCTTTCACCAG
AGCCTGACTCCTCCACTAGGAACAAGAAGCGCCATAAACGTAACGCAAGT
CGTTTTAGCAATAATGAAGAAGTAAGAGATGATTTTTTGATAATTATGAC
CGGTTTTCACTTTCTGAAGATGCTCTga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036207XLOC_036207Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057450-proteinTCONS_00057450-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057450-exon-scaffold_289-1491911889:33943..35456TCONS_00057450-exon-scaffold_289-1491911889:33943..35456Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1510915933:33943..35456TCONS_00057450-exon-scaffold_289-1510915933:33943..35456Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1575043694:33943..35456TCONS_00057450-exon-scaffold_289-1575043694:33943..35456Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1491911889:35727..35957TCONS_00057450-exon-scaffold_289-1491911889:35727..35957Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1510915933:35727..35957TCONS_00057450-exon-scaffold_289-1510915933:35727..35957Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1575043694:35727..35957TCONS_00057450-exon-scaffold_289-1575043694:35727..35957Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1491911889:36079..37333TCONS_00057450-exon-scaffold_289-1491911889:36079..37333Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1510915933:36079..37333TCONS_00057450-exon-scaffold_289-1510915933:36079..37333Clytia hemisphaericaexon
TCONS_00057450-exon-scaffold_289-1575043694:36079..37333TCONS_00057450-exon-scaffold_289-1575043694:36079..37333Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_289supercontigscaffold_289:33943..37333 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.21171	4.78474	1.48244	1.23912	14.7251	11.636	13.6297	14.2441	7.46607	11.9812	8.91188	6.10382	6.73784	5.60137	6.14252	7.31224	10.6017	10.0644	4.06729	4.97726	7.46014	6.5822	12.3594	13.3036	4.99508	6.15105	8.6104	6.23158	11.3717	13.7852
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010569Myotubularin-like_Pase_dom
IPR011993PH_dom-like
IPR029021Prot-tyrosine_phosphatase-like
Blast
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BLAST of TCONS_00057450 vs. Swiss-Prot (Human)
Match: MTMRA (Myotubularin-related protein 10 OS=Homo sapiens GN=MTMR10 PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 4.859e-62
Identity = 156/516 (30.23%), Postives = 261/516 (50.58%), Query Frame = 1 
Query:  769 GESVLAKANVNRLNIM-GSRNSGARGTLFVTNFKVAFTSNCGGGYDFKKPSSLDKLLSEEVDDKDDIIPLTVIEHLFAISTSKQKRKKIKDASKELSSNYDIIEIVTKDFRIIQYDFKLTSEESRKPLIKMLSHYSFPTALSRLFAFDYGKKAWQPNTNLTERA-------------------------FCTYSHAKDYELDLNRLGASEQWRVSKVNVEYRLCKSLPQYNVCPASLDDESIIVAASKYPNNRFPVWLWSDSSTGAALLLSSQLKNDTSLTMHEHPVTITESIRNKGHTTGETISIDIGSPCPTXXXXXXXXXXXXRECIFRSSKDFWESDSSWLGDIEQTGWLSHVSSCLELVHDIIKKINEKQTSVIVCDPDGRHFAILITSLVQILLDPYYRSLMGLQALIQKDWVMKGFPFCQRLHHISESSKSTIGSQIRTASFKGKDERRDKDLTYEGESPVFVLFLECLHQLIRQHPLEFEYTEQFLVLLYDASYSCLFGTFLFNSSYE 2238
            GE V+ + N  R  I   +      G L  +NFK++F ++         P  L K     +   +  +PLT IE +  ++  K+K +K+   +++L  N   + I  KDFRI+++ F  +  ES K +   ++HYS PT L  LFAF+Y  K +  + N                              F TYS   D++ ++ R GAS  WRV  +N  Y +   LP+Y V P+SL D+ + + +  +   R P+W WS S+ G+AL+  + +K+   L   +    I  +I        +    D+    P +++++++F KLK+ C+   ++ F E++  WL  +E T WL +V + L+   +++  +  K  SV++ + +GR  +  + SLVQ++LDPY+R++ G Q+LIQK+WVM G+ F  R +H+  S K                           ESP+F+LFL+   QL+ Q+P  FE++E +L +LYD++   LFGTFLFNS ++
Sbjct:   41 GEIVVNEVNFVRKCIATDTSQYDLWGKLICSNFKISFITD--------DPMPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRK-QKVLGPNQKLKFNPTELIIYCKDFRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVGKKYHNSANKINGIPSGDGGGGGGGGNGAGGGSSQKTPLFETYS---DWDREIKRTGAS-GWRVCSINEGYMISTCLPEYIVVPSSLADQDLKIFSHSFVGRRMPLWCWSHSN-GSALVRMALIKD--VLQQRKIDQRICNAITKSHPQRSDVYKSDLDKTLPNIQEVQAAFVKLKQLCV---NEPFEETEEKWLSSLENTRWLEYVRAFLKHSAELVYMLESKHLSVVLQEEEGRDLSCCVASLVQVMLDPYFRTITGFQSLIQKEWVMAGYQFLDRCNHLKRSEK---------------------------ESPLFLLFLDATWQLLEQYPAAFEFSETYLAVLYDSTRISLFGTFLFNSPHQ 510
The following BLAST results are available for this feature:
BLAST of TCONS_00057450 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTMRA4.859e-6230.23Myotubularin-related protein 10 OS=Homo sapiens GN... [more]
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