TCONS_00057421 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057421
Unique NameTCONS_00057421
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057421 ID=TCONS_00057421|Name=TCONS_00057421|organism=Clytia hemisphaerica|type=transcript|length=118bp
AGTGAATGTTTTCACCTTGATGGGGGACTAATGCAAATGGAGGATTTCAG
GAAATTTTATGGGAAGTGGGGGTAGAAAGTGCAAAGATTAGGtataatat
ttcaaatagaTGATTAAA
Run BLAST on NCBI

transcript from alignment at scaffold_288:137601..137718

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057421 ID=TCONS_00057421|Name=TCONS_00057421|organism=Clytia hemisphaerica|type=transcript|length=118bp|location=Sequence derived from alignment at scaffold_288:137601..137718 (Clytia hemisphaerica)
TTTAATCAtctatttgaaatattataCCTAATCTTTGCACTTTCTACCCC
CACTTCCCATAAAATTTCCTGAAATCCTCCATTTGCATTAGTCCCCCATC
AAGGTGAAAACATTCACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036180XLOC_036180Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057421-exon-scaffold_288-1491911889:137601..137718TCONS_00057421-exon-scaffold_288-1491911889:137601..137718Clytia hemisphaericaexon
TCONS_00057421-exon-scaffold_288-1510915933:137601..137718TCONS_00057421-exon-scaffold_288-1510915933:137601..137718Clytia hemisphaericaexon
TCONS_00057421-exon-scaffold_288-1575043694:137601..137718TCONS_00057421-exon-scaffold_288-1575043694:137601..137718Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:137601..137718 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057421 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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