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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057407 ID=TCONS_00057407|Name=TCONS_00057407|organism=Clytia hemisphaerica|type=transcript|length=1277bp
aaaaaattaaatcaccTACCCGACGTGGGAAGAAGATAGgtaagaaaaac
gtaatgtgACGTAGTGCAAAAGTACAAGTCTTCGTATCTCTGGAACGAAT
ATGTTTCTCAAcaagaaattttgcacaaagtagCCCCTTCGGGACAAAAG
CTcacataaaaaatttcagaccAATATTACGACGTCTTCGGCagttacgt
tgaaattccgcaaattactaatctgcgGAATAACATTCCGCAAATCAATA
ACCTAcggaattttcaaatatttcgaaCCGTTAAATATCTTACAACAAAA
GTTGGCACGTATGTTACTATCCAAAAGATCCTGCTTCATGCCAAAAATCA
GCCTTGTGGTACCTTGTTGACAGGAGttacgtaagaaaaacgtaatcGGA
CGTAATGCAAAAATACCAGTCTCTGTATAACCCTAACCAATAGAAAAACG
TTATGTGACGTAGTGAAAAAATACAAGTCTGCGTATCTATAGAACAAATA
AATTTCTCAAGAAGAAAATCTGCACAAGATAGCCTCTTTTGATGACTGAT
GCGAATGTTTTACTTGATTCAAGTACtcaaattttcctttgaccTGAAGG
AGTTGGAGAGGACAACTTTTTAGATTGGATTCTAAAACTATCACACTACA
GTTTGCGATGAAGAAGTCAAAATATATACTTCCAGTGATAGTGATAGTGA
TCTATTTTTGGCTTGTGTCCTGTGTTTGTCAGGAACGATGAAGTCTTGCA
GAAACCGGTAagtcttttaatattttagataacAGCTTGTATGAATGAAT
AAAATCATCCAGCTTCTTTTTATCCCAAATGGAATATGAAGCTTTTCTCC
GTCGAAGAATTTCTATGGCCCAATTCCCAGGGAATAAAAACCCTCAATTT
GTGTAACATAAAATAGGGTATTTACTATTtctgaagttaagaaaaatTAC
CAGAGAGTTGAGACAAGGTGAAGCGtgtgacgctacagatcaaatctgtg
ttttgactggactcaccaaccattatgatttttaaaaatgtgtaCAGTCT
GTTTACCGCAACAACTCATGCTAAATTCAAAATCCCATGAGTGTGTTATT
GTTTCCATCCTACTCCGCTTACTCTTCGTATAAAATTGTCTCTTTAATTA
AACTTttactaaaaaatgaaaaatagggaTGATTCACTCTTCATTCTTGA
AAGATAATCTTTTTATGAAGAGAAGgtcattttgttttctcttttctgat
ctAAACTGGTCTAAAAGTGTCTCGGGC Run BLAST on NCBI transcript from alignment at scaffold_288:23191..24467 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057407 ID=TCONS_00057407|Name=TCONS_00057407|organism=Clytia hemisphaerica|type=transcript|length=1277bp|location=Sequence derived from alignment at scaffold_288:23191..24467 (Clytia hemisphaerica)
GCCCGAGACACTTTTAGACCAGTTTagatcagaaaagagaaaacaaaatg
acCTTCTCTTCATAAAAAGATTATCTTTCAAGAATGAAGAGTGAATCAtc
cctatttttcattttttagtaaAAGTTTAATTAAAGAGACAATTTTATAC
GAAGAGTAAGCGGAGTAGGATGGAAACAATAACACACTCATGGGATTTTG
AATTTAGCATGAGTTGTTGCGGTAAACAGACTGtacacatttttaaaaat
cataatggttggtgagtccagtcaaaacacagatttgatctgtagcgtca
caCGCTTCACCTTGTCTCAACTCTCTGGTAatttttcttaacttcagaAA
TAGTAAATACCCTATTTTATGTTACACAAATTGAGGGTTTTTATTCCCTG
GGAATTGGGCCATAGAAATTCTTCGACGGAGAAAAGCTTCATATTCCATT
TGGGATAAAAAGAAGCTGGATGATTTTATTCATTCATACAAGCTgttatc
taaaatattaaaagactTACCGGTTTCTGCAAGACTTCATCGTTCCTGAC
AAACACAGGACACAAGCCAAAAATAGATCACTATCACTATCACTGGAAGT
ATATATTTTGACTTCTTCATCGCAAACTGTAGTGTGATAGTTTTAGAATC
CAATCTAAAAAGTTGTCCTCTCCAACTCCTTCAggtcaaaggaaaatttg
aGTACTTGAATCAAGTAAAACATTCGCATCAGTCATCAAAAGAGGCTATC
TTGTGCAGATTTTCTTCTTGAGAAATTTATTTGTTCTATAGATACGCAGA
CTTGTATTTTTTCACTACGTCACATAACGTTTTTCTATTGGTTAGGGTTA
TACAGAGACTGGTATTTTTGCATTACGTCCgattacgtttttcttacgta
aCTCCTGTCAACAAGGTACCACAAGGCTGATTTTTGGCATGAAGCAGGAT
CTTTTGGATAGTAACATACGTGCCAACTTTTGTTGTAAGATATTTAACGG
ttcgaaatatttgaaaattccgTAGGTTATTGATTTGCGGAATGTTATTC
cgcagattagtaatttgcggaatttcaacgtaactGCCGAAGACGTCGTA
ATATTggtctgaaattttttatgtgAGCTTTTGTCCCGAAGGGGctactt
tgtgcaaaatttcttgTTGAGAAACATATTCGTTCCAGAGATACGAAGAC
TTGTACTTTTGCACTACGTcacattacgtttttcttacCTATCTTCTTCC
CACGTCGGGTAggtgatttaatttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057407-exon-scaffold_288-1491911889:23191..24467 | TCONS_00057407-exon-scaffold_288-1491911889:23191..24467 | Clytia hemisphaerica | exon |
| TCONS_00057407-exon-scaffold_288-1510915933:23191..24467 | TCONS_00057407-exon-scaffold_288-1510915933:23191..24467 | Clytia hemisphaerica | exon |
| TCONS_00057407-exon-scaffold_288-1575043694:23191..24467 | TCONS_00057407-exon-scaffold_288-1575043694:23191..24467 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:23191..24467 . |
Blast
The following BLAST results are available for this feature:
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