TCONS_00057386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057386
Unique NameTCONS_00057386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5127

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057386 ID=TCONS_00057386|Name=TCONS_00057386|organism=Clytia hemisphaerica|type=transcript|length=5127bp
CCAGTGAATTCGACTCAAGGTGATCTGGGAGATATAGTTTCTGAAACATC
AAAACCAGAACCTACAAAACCAGAAGGGACCTCATCAGCATCCTCCTCAA
CCACTTCAACCAACGCTCATAGTGGTGGTACCAACACCGGTTCCTCGTCA
ACCCAAACTGTCTCCAATGGTGGTACATCAAGTACATCCACTGACAGTAG
TAGTAGTGTAGGGGGTGGACAAGCAACTAGCAATTCATCCAATGCTAGCA
CAGGAGGACCGGTCGCATCACAACCTGaaaCACATTTCACAGTCATTAAC
AAAGCAGGAAGCACCATCAAACTGGTCGACAATTCTGGTGCATGGAGCAT
GGAATTCCCTCCGGTAGAAAGTACCGAAATGTTACCCCAAGTTGCCGTCA
CACTAAAAAAACAAGCCGTCTTTAAAGCCTACTTGGTTGGAACAGATGGT
AAACAAGCAGATTCTCTTTTGATCAATGGAGAAATACAATTTGTGATCGA
AGCAGGCAAAGCACCTGAAACATCGCTTGTGGTTCATAAAGCAGGTTTCG
ACTGGAAGAGCGCTTTAGTGACAGACAATCAAAAGCAATTCACTTTTAAT
GCGATCAACCAAGCTGATGGGGGAGCAGAACTGAAAGAAATGTCTGGCAC
TGGACTCAACATGAACATCCTCAAAGGGGGTACCGTTCAATGCTCTATCT
CCACCACTGGATTGAAAGATCCATTGAAATACAAAGCTGTCGGTTCCAAT
GGTAAAGCACTAAAGATCAACGGGCAAGAAACGTTGACTGTTGAAACGCC
AGCGTCGACTGACCCAACTACTCTTGTTATCCATAACGATGGTTTCGATT
GGAAGAAGAGTGGAACCACAATGGATACCAGTAAAGCATACCAATTCATT
GTGCCCAACATTGCTGACAATGATGTGACACTTTCCGAATTTAAAGGGAC
AAACTCTAGATTCGACATCAGCAAAGGTGACATGCGATTCCAATTCACCA
TCCCCACAGATGATTCGAAAGATCAGAGGATGTTCCAATTCAAAGCCGTC
GATAAATCAACAGCTAAAGACCTCTTGGTCAATGGCCAATCTGCCTTTGT
AGCCAATCCATCAATACCGTTAGCACCTACCACGACGCTGGTCATCCACA
AGGAAGGTCAGGAATGGGAAAACATCAGAGCATCTTATCTTGGTTCAGGT
ATCGCTTCCCAAGGAACTGGCAGCTCTACATCATCGACGACAACAAACTC
TAACAACTCTGGAGGTTCTAGCACTAGCACCACATCAACTGGATCCACCA
CATCTGCATCCACTTCCACCGTCAACATGGTCTTCTCAACTCGAAACGTC
ACCGAAGATAAGGAAGTGACAATCAAAGAAAAGGGAGGAGCTTTTGCCAA
CATTGACATCCCACAAAAAGCTCTCAAAATTGATATCGGATTCAGCGTCG
CCAGCTCTGTACAATCGTTTGATTTAGAAGCCAAAGGTAGCGGTGAAAAC
ACCATGTACTACCTGAACGGCCAACAGAATCTCAAAATCGACGTCAAAGT
TCCACCCTCGGCTATCATCGTTCACGAGAGAGGATTTGACTGGCAAAAAG
AATTGGCTGAAATCAGAAGAGTTTCGACATCACAAGGTAACCTgcaaaca
acaaatcaaaacaaattcaagATTCACGTACGTAACGAAGCGTCGGACGA
CATTCGCTTCCAACAGAAACAACAGGATGGCTCAAGCACCGGTCCCGTTG
TTGACGTTCCTAAAGGCGTCATCGCTAGCGTGGATTACGTCGACAAGGAC
AACACCGGCAAGTTGACTTTCCAGGCTTTCGGTAAGAAAGACGAGAAACA
CTATCAATTGAACGGAGAAAATGAATTCGTTGTAGATGAGCAGAATTTGA
GCAGTAATGGACAATACGTTGTCGTCCATGATGAAGGTCAAGAATGGAAG
ACTTCTTTGAATGAATTGATGGCTGGTACATCTTCAGGAGGGACAACGTC
CATGGGAGGAAGCACCACCACGTCAGGTACCACTACTCTCGGAGGAAACT
CATCAACAACTACCGTCGGTGGAGGTAGCACAACCTCTGGGTCGATGACC
TTGGGTGGAGGAGGTACAACAGGAGGGAGCACCACACTGGGAGGTGGTTC
TTCATCAGGATCGACCACTCTTGGAGGAGGCAACATGACAAGCGGTAGTA
CTACCCTTGGTGGTGGCTCTACAGGTTCAACAACCTTAGGTGGAGGTAGC
TCCTCgacaactacacttggaggagGCGGCTCTTCTTCAACAGGATCAAC
AACTCTAGGAGGAGGTAGCGGCTCTAGCACCACCCTTGGAGGTAGCGGAA
CAAGTGGATCTACGACTCTTGGAGGAGATGGCTCTTCAGGGATGGGAGGT
AGCCACGGATCCTCTTCTACCACGACCTTAGGAGAGGGAAGTGGGTCGAG
CACAACTACTCTTGGAGGTGGAAACTCATCGATGACTACCCTTGGAGGTG
GAAGCACCTCGTCAAGTGGGTCCACTACACTTGGAGGAAATTCTTCATCT
ACCACTTTAGGTGGAGGTAGCTCGTCAACCTCTACTCTTGGTGGGGGAAG
CAGTTCATCATCCACTTTAGGAGGTAACTCATCCATGACAAGCCTTGGAG
GCGGTGGCAGTTCAACTACCACACTAGGAGGTAATTCATCTATGACAACC
CTTGGAGGCGGTGGCAGTTCATCATCCACACTAGGAGGTAACTCATCTAT
GACACCCCTTGGAGGCGGTGGCAGCTCATCATCCACACTAGGAGGTAACT
CATCTATGACAACCCTTGGAGGTGGTGGTAACAGTATGACTTCACATGGT
GGAAAcagctcatcatcatcttcGACATCAATGTCACAAGTCGGACATGT
TGGAGGGTCAGATGGTACTTCGACTGTTTCCCATAGTGGAAGCTCCACTA
CCTCTGGGGAGCTAGTCCAAGTCTACGTATCTAGCGTTACTGACGAGCCA
GCTTTGTTGCTGGTTAGCGGTAGTGACAACCAAGAAGTTAAAAAAGAATC
AATAGTGACTTTTACAGCTTCAGAGAAAACAGAATTGACAGCTCAAACCA
AGTCGGGAAAACCTTTATTGTTAAACGGTCAAAGTAAACACGTTTTGGCA
CCAGGTCCTTCCAAAATCTTTATCATTCATGAAGACGGTCAAGACTGGAA
GACGTGGGAAAAGACTGTCAATCAATTTGTTTCCCACAATCCTGGATCAA
TCGTCAAGCCTGGCGTCACTGTCATCAAACCTAAAGAATTGCCAACACTG
TTTGGTAAACTCAACTTCAAAAACCAAGCTCAAAAGGACGTGAAGATTTA
TGAGATGTCAGGGATAGGTGAACCCACGGTTCTCTCACCTAATTACGTCA
GCACATTTTTTGTCAAGTCCAGTCGACCAAGTGCGACTTTTAAAGCTGAG
GATCCAACAACTCATGAAGAATATTTATTGAATGGTAAAAATGTCTTCAA
AGTTGATTTGAATCAAAACCCAACCACGGAGAATGACGTCACCATAACAT
CAGATACGTCGTCCAGTAAAAGAGCTCCCGAAAAATCAAATTCTCAATGC
ACGAAGCAGTCAGCAGACAAGGGACCATGTTTTAGTGCTCTTCAACACGA
AGTCCAAATCGAAGCATCCGAGGGAAGCAAATTGAAAAGCTCCTCGTGTA
AACGATACCTTGAGGGATTATTGAACAAGTGTAGCTGGAGAAACACCACA
TACACTGCCAACGATTGTCACAATTATTGCAACGATAACGATGATAAAGA
TGTTTGCACACGTGTTTGGGACTGGGAACCACAGAAATGCACATCCGCCA
TGACTAGATATTATTACTCACCAACCGCTACTTCCAATTGTATTTCCATG
GATTTCGGTGGTTGTCTTGGTAACACCAATAACTTTGCAACACCAGACGC
ATGTTCAAGAGCTTGCTCTTCTAATGaATCAAACGAAAGTGACGGCAAAC
GAGTGGTTCGAAACACGTATGAAAGACGAATGAAAAAGGTACTTGACCAA
TCGAAGCTAATCGAGAATCTATCGAAATTGTATCGATGAAGGGAATGAAT
GACCCATTTGGAAAGAACGCTTTTTTATATGAACTGAACATTTTTTGTAC
TCAAACGACATTATTATAATTACAGACTTTGGTAGTTTGAAACATACTTC
ATGAAAAAGAATGTCTCGAAgacgaagaaaaatatttttaaatagaaAAT
TATATGTTGTGAAAATAGGTATATTTCTAGAAAACTTGgattcgaaaata
ttttcgtcgaaaattcctaaatattttgataaaattgagaACGAAATTTC
GAAAACAGTTTAATTTGAAGCtcgaaaaatttactttttcaattaaaaac
aAGTTGTTTTACTGACGGctaattatttattttatgctttatttttttgt
agtaATAATTTATTCCATaaacaaaattgtaaatttttaataatttatgg
aaaattgTGGACGTAATACGCACgattcaatttaaaaatctattgtaata
tttttagaagaaagatgtttatttttttgaaaatgaaatatattgaatga
acgaattaaaaaaattaatttgacaaTGATACAAACGCTTTCTCtgataa
aatatgataaaatatatctgtttaaaaataatttccaaTAAATAATTAGG
ATTTGTTATATACAataggtaaaaaataatttcgaccgTCAcccaataaa
tgaaaaatagctTCCTTTGTTCTACACgcttaaatattcttaactttttg
aggaaaaatcatcttgaaatattcttacggtattcttaggtttggaTCCA
ATCCTAGCCAAAATGTAGCATGTAATACACCTTGAGCAAAGATTTGGCAC
TTTTGTGAAACTTTTTAGTATTGCTGGCAATTGGCAATTTATCAGTAAcg
tgctctaaaaatggcattctcaGGTTTCGTTGCCAATAATCCATGATAGT
GATATTCTtaggatatttttaattttttggctaatttcatcataaatatt
cttataaagtatatttttataaaaaagcgtgcattCAAAATCAACTCGAT
AAGATCAATCTAATTACATATCCCTAT
Run BLAST on NCBI

transcript from alignment at scaffold_288:599943..608569-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057386 ID=TCONS_00057386|Name=TCONS_00057386|organism=Clytia hemisphaerica|type=transcript|length=8627bp|location=Sequence derived from alignment at scaffold_288:599943..608569- (Clytia hemisphaerica)
CCAGTGAATTCGACTCAAGGTGATCTGGGAGATATAGTTTCTGAAACATC
AAAACCAGGTAAATAGCTCATACAATTCGCCTATTCTTTCATCTACTTAC
TCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTC
ATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCAT
TCAGTTCTTCCGCGCCGAAAGACAGTAAGCTAAAATTTAATAATACCAAG
AGAATGTACGAGAAGAAAACCTAGTCAAAAATATGAATTTTTAGGCTGCT
CAATATCTCATTTCTTCTAAGCTTTATGTGAGTCATTAATTAATATTATG
TCATCTCGTACCCTTATAACGTGCTTAGAACAACCGCGTTAAATTTCTCC
TTCTTTTTTCCCACAGAACCTACAAAACCAGAAGGGACCTCATCAGCATC
CTCCTCAACCACTTCAACCAACGCTCATAGTGGTGGTACCAACACCGGTT
CCTCGTCAACCCAAACTGTCTCCAATGGTGGTACATCAAGTACATCCACT
GACAGTAGTAGTAGTGTAGGGGGTGGACAAGCAACTAGCAATTCATCCAA
TGCTAGCACAGGAGGACCGGTCGCATCACAACCTGGTAAGATATTTTAAC
CCTTTATTCTACAGTGTATTGTTATGTCAAAGAGACGATCGAAAACTCGG
AAAACGTTCAACAAGTCCAGGGCCTTGCGTTTCTGTACTTTAAAACTTTG
TATTAAGTACCAAAGTAAGATAGCGTAGCATCTAAAAAACTTTCGACCTT
CACAGATGTATTCAAAAATTTCATCTTTATTTTTACAGAAACACATTTCA
CAGTCATTAACAAAGCAGGAAGCACCATCAAACTGGTCGACAATTCTGGT
GCATGGAGCATGGAATTCCCTCCGGTAGAAAGTACCGAAATGTTACCCCA
AGTTGCCGTCACACTAAAAAAACAAGCCGTCTTTAAAGCCTACTTGGTTG
GAACAGATGGTAAACAAGCAGATTCTCTTTTGATCAATGGAGAAATACAA
TTTGTGATCGAAGCAGGCAAAGCACCTGAAACATCGCTTGTGGTTCATAA
AGCAGGTCAGCTTTCTTATTTACACTTTCACCCCTAGGATCAGTGTGTAT
TATATCTGCTTAGGGGAATCTAACTTATCTGTAGCAAACCAGATGTCTCC
GTAGATTTCAAATTTTCAAAAACTCATTGCCGTAGAGTTTTATTTTGAAG
CCTATGATCAAGCGGTATTCGTTTCGCGTTGTGAGACTTATCCTTGAAGA
TTTTGCCAGACAATTGTATCATTTTTCATTTCTCCCTCATTTTAGGTTTC
GACTGGAAGAGCGCTTTAGTGACAGACAATCAAAAGCAATTCACTTTTAA
TGCGATCAACCAAGCTGATGGGGGAGCAGAACTGAAAGAAATGTCTGGCA
CTGGACTCAACATGAACATCCTCAAAGGGGGTAAGTGTTGGCAGAAGATC
CTGAAACTTTACAAAGCCTTGTCAGTGTACAATACAGAAAGAGCGAAGGC
TTTTTAAACTTAACAAACAAACAAAGTGTTCAAAAGGTTTATGCTGATTT
CAATTTCAATTTAAGTCTCTGTTTCAATCTTTCTCCAGCCAATCATTTTC
CAAATTATTAAGTAATCCCTCCTATCATGATTAGGTACCGTTCAATGCTC
TATCTCCACCACTGGATTGAAAGATCCATTGAAATACAAAGCTGTCGGTT
CCAATGGTAAAGCACTAAAGATCAACGGGCAAGAAACGTTGACTGTTGAA
ACGCCAGCGTCGACTGACCCAACTACTCTTGTTATCCATAACGATGGTAA
GATTGAGTTTATGCTTTAGAAGGGAGGGAACGCCCAGCAAGTGAAAATCC
ATGTGTTGATTCTTGTCCAATTTGTTAACTTTGAAAAATGAATTTCGATG
TCCATTAATCAGTGCAGAATCAGTAGAATCGAACACAACTACCATTCAAT
CTGTTTGAATTTGTATATGTTGAAATTTTAAATCCTAATTTTTCTTCCCT
TTTTACAAAAGTTTCACAGATATATAATTCATTTATGCCTGCACTGACTA
AAGCAACTGTTAAAGCAACTGTTATACGGACTGGATGGTAAATATTTATT
TCAAACTACGCCCATAGGTTTCGATTGGAAGAAGAGTGGAACCACAATGG
ATACCAGTAAAGCATACCAATTCATTGTGCCCAACATTGCTGACAATGAT
GTGACACTTTCCGAATTTAAAGGGACAAACTCTAGATTCGACATCAGCAA
AGGTGACATGCGATTCCAATTCACCATCCCCACAGATGATTCGAAAGATC
AGAGGATGTTCCAATTCAAAGCCGTCGATAAATCAACAGCTAAAGACCTC
TTGGTCAATGGCCAATCTGCCTTTGTAGCCAATCCATCAATACCGTTAGC
ACCTACCACGACGCTGGTCATCCACAAGGAAGGTCAGGAATGGGAAAACA
TCAGAGCATCTTATCTTGGTTCAGGTATCGCTTCCCAAGGAACTGGCAGC
TCTACATCATCGACGACAACAAACTCTAACAACTCTGGAGGTTCTAGCAC
TAGCACCACATCAACTGGATCCACCACATCTGCATCCACTTCCACCGTCA
ACATGGTCTTCTCAACTCGAAACGTCACCGAAGATAAGGAAGTGACAATC
AAAGAAAAGGGAGGAGCTTTTGCCAACATTGACATCCCACAAAAAGCTCT
CAAAATTGATATCGGATTCAGCGTCGCCAGCTCTGTACAATCGTTTGATT
TAGAAGCCAAAGGTAGCGGTGAAAACACCATGTACTACCTGAACGGCCAA
CAGAATCTCAAAATCGACGTCAAAGTTCCACCCTCGGCTATCATCGTTCA
CGAGAGAGGATTTGACTGGCAAAAAGAATTGGCTGAAATCAGAAGAGTTT
CGACATCACAAGGTAACCTGCAAACAACAAATCAAAACAAATTCAAGATT
CACGTACGTAACGAAGCGTCGGACGACATTCGCTTCCAACAGAAACAACA
GGATGGCTCAAGCACCGGTCCCGTTGTTGACGTTCCTAAAGGCGTCATCG
CTAGCGTGGATTACGTCGACAAGGACAACACCGGCAAGTTGACTTTCCAG
GCTTTCGGTAAGAAAGACGAGAAACACTATCAATTGAACGGAGAAAATGA
ATTCGTTGTAGATGAGCAGAATTTGAGCAGTAATGGACAATACGTTGTCG
TCCATGATGAAGGTCAAGAATGGAAGACTTCTTTGAATGAATTGATGGCT
GGTACATCTTCAGGAGGGACAACGTCCATGGGAGGAAGCACCACCACGTC
AGGTACCACTACTCTCGGAGGAAACTCATCAACAACTACCGTCGGTGGAG
GTAGCACAACCTCTGGGTCGATGACCTTGGGTGGAGGAGGTACAACAGGA
GGGAGCACCACACTGGGAGGTGGTTCTTCATCAGGATCGACCACTCTTGG
AGGAGGCAACATGACAAGCGGTAGTACTACCCTTGGTGGTGGCTCTACAG
GTTCAACAACCTTAGGTGGAGGTAGCTCCTCGACAACTACACTTGGAGGA
GGCGGCTCTTCTTCAACAGGATCAACAACTCTAGGAGGAGGTAGCGGCTC
TAGCACCACCCTTGGAGGTAGCGGAACAAGTGGATCTACGACTCTTGGAG
GAGATGGCTCTTCAGGGATGGGAGGTAGCCACGGATCCTCTTCTACCACG
ACCTTAGGAGAGGGAAGTGGGTCGAGCACAACTACTCTTGGAGGTGGAAA
CTCATCGATGACTACCCTTGGAGGTGGAAGCACCTCGTCAAGTGGGTCCA
CTACACTTGGAGGAAATTCTTCATCTACCACTTTAGGTGGAGGTAGCTCG
TCAACCTCTACTCTTGGTGGGGGAAGCAGTTCATCATCCACTTTAGGAGG
TAACTCATCCATGACAAGCCTTGGAGGCGGTGGCAGTTCAACTACCACAC
TAGGAGGTAATTCATCTATGACAACCCTTGGAGGCGGTGGCAGTTCATCA
TCCACACTAGGAGGTAACTCATCTATGACACCCCTTGGAGGCGGTGGCAG
CTCATCATCCACACTAGGAGGTAACTCATCTATGACAACCCTTGGAGGTG
GTGGTAACAGTATGACTTCACATGGTGGAAACAGCTCATCATCATCTTCG
ACATCAATGTCACAAGTCGGACATGTTGGAGGGTCAGATGGTACTTCGAC
TGTTTCCCATAGTGGAAGCTCCACTACCTCTGGGGAGCTAGTCCAAGTCT
ACGTATCTAGCGTTACTGACGAGCCAGCTTTGTTGCTGGTTAGCGGTAGT
GACAACCAAGAAGTTAAAAAAGAATCAATAGTGACTTTTACAGCTTCAGA
GAAAACAGAATTGACAGCTCAAACCAAGTCGGGAAAACCTTTATTGTTAA
ACGGTCAAAGTAAACACGTTTTGGCACCAGGTCCTTCCAAAATCTTTATC
ATTCATGAAGACGGTCAAGACTGGAAGACGTGGGAAAAGACTGTCAATCA
ATTTGTTTCCCACAATCCTGGATCAATCGTCAAGCCTGGCGTCACTGTCA
TCAAACCTAAAGAATTGCCAACACTGTTTGGTAAACTCAACTTCAAAAAC
CAAGCTCAAAAGGACGTGAAGATTTATGAGATGTCAGGGATAGGTGAACC
CACGGTTCTCTCACCTAATTACGTCAGCACATTTTTTGTCAAGTCCAGTC
GACCAAGTGCGACTTTTAAAGCTGAGGATCCAACAACTCATGAAGAATAT
TTATTGAATGGTAAAAATGTCTTCAAAGTTGATTTGAATCAAAACCCAAC
CACGGAGAATGACGTCACCATAACATCAGATACGTCGTCCAGTAAAAGAG
CTCCCGAAAAATCAAGTAAGTTTGATTTATTTAGAAAGTAGTTAAATTCA
GATACAGGTCACCTCCAACTCAGTTACATCACTTTGAGACTTTTATTTTA
TTCCGAATATGTTTGCAAAATGAAGATCCATATTTAGTGTCGTTGGCCAG
TTCATTTTAAGGATCTTTTTCATTTTCCCTTTAGATTCTCAATGCACGAA
GCAGTCAGCAGACAAGGGACCATGTTTTAGTGCTCTTCAACACGAAGTCC
AAATCGAAGCATCCGAGGGAAGCAAATTGAAAAGCTCCTCGTGTAAACGA
TACCTTGAGGGATTATTGAACAAGTGTAGCTGGAGAAACACCACATACAC
TGCCAACGATTGTCACAATTATTGCAGTACGTCAATTTCATTCATTTTGA
AAATTTTCCTTGAATATCAGATGCTTTTTACCTCTGATCGATATTCAATC
ATATCACCAGTTTTGGATGAACGTAGGAAGGAAGAATTTGACTTTCACAT
AAACCCTGTCTTTAAAAATGTAGCGCCTTCACACTCGCAAATTGACTCCG
CCGTAGGTCACGGGCAATAGGATTGTATCATAATTTGTTTTAACCTTAAA
TTCAATTTCTCCCTCTTAGACGATAACGATGATAAAGATGTTTGCACACG
TGTTTGGGACTGGGAACCACAGAAATGCACATCCGCCATGACTAGATATT
ATTACTCACCAACCGCTACTTCCAATTGTATTTCCATGGATTTCGGTGGT
TGTCTTGGTAACACCAATAACTTTGCAACACCAGACGCATGTTCAAGAGC
TTGCTCTTCTAATGGTGAGTTTGATTTTTCTCCCTTTGATCAACCTTTTA
TCCATTCACTTTGAGTCAATATCTTTTATCTCGAGATTAAGTTTTTTGGT
TTAAACCAAGATGATAATTATTTCTTGAAATTGTCTTGACATTACGTACT
TTTACTCCGAAAGCTTTGTCAAAGTTGATTTTTGGACCTACCCCGGTGGG
GTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTCCGTTCGTCCGTTCG
TTCGTTAGTTATTAGCTTTCCTCGTGATTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGGACTTTGTG
AAAAATTGGATCGTTAACTTTTTCTGATTTTTTGCATGAAAGTAGGGTAC
CATCATAGGTAAAAGATGGCTCAAGCATATTTTTTCAAAAAAATTTTGTT
GGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCCTAC
ACCAATGTTCTTAGTTAAATTACTCAATTTCTTTATGAGATGTTTTTTTT
GCTCATGAGAGCTTACTTTTGAAGAATGTGTGTGTTTAGACATGAAATTT
TGGTTTCTTGGCGTGTTTTTATAGAAAAACTGGCCAAATNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTATTTGTGTTCTGAATGATTGTTTAATGGTCA
CGTCACGTAGATATCAATTATATATGTGTTAAATGCATAACCAGGTAGGT
CCATAAAAGTATCACTTGTTTCACTGAAAATTTGCTTGGACGCACCTAGT
CTGGACCCATACAAATTTTTACTCTATTTCACATGAGATTCGAGTTCAGA
AAAAATCTTGAGCAGACGGGGCCCCATCTAGGACGCACCATGAAACTTGA
GTTTGAAATAAAAATTTAGTCAAGTCTTATTATAATACTCCGAAAGTTAA
AAATGTATTATAACATCTAATATTGTAATATACGTAATGTGATATTTGAT
CAAAAATACATTTTTTCTAATTTCAGAATCAAACGAAAGTGACGGCAAAC
GAGTGGTTCGAAACACGTATGAAAGACGAATGAAAAAGGTACTTGACCAA
TCGAAGCTAATCGAGAATCTATCGAAATTGTATCGATGAAGGGAATGAAT
GACCCATTTGGAAAGAACGCTTTTTTATATGAACTGAACATTTTTTGTAC
TCAAACGACATTATTATAATTACAGACTTTGGTAGTTTGAAACATACTTC
ATGAAAAAGAATGTCTCGAAGACGAAGAAAAATATTTTTAAATAGAAAAT
TATATGTTGTGAAAATAGGTATATTTCTAGAAAACTTGGATTCGAAAATA
TTTTCGTCGAAAATTCCTAAATATTTTGATAAAATTGAGAACGAAATTTC
GAAAACAGTTTAATTTGAAGCTCGAAAAATTTACTTTTTCAATTAAAAAC
AAGTTGTTTTACTGACGGCTAATTATTTATTTTATGCTTTATTTTTTTGT
AGTAATAATTTATTCCATAAACAAAATTGTAAATTTTTAATAATTTATGG
AAAATTGTGGACGTAATACGCACGATTCAATTTAAAAATCTATTGTAATA
TTTTTAGAAGAAAGATGTTTATTTTTTTGAAAATGAAATATATTGAATGA
ACGAATTAAAAAAATTAATTTGACAATGATACAAACGCTTTCTCTGATAA
AATATGATAAAATATATCTGTTTAAAAATAATTTCCAATAAATAATTAGG
ATTTGTTATATACAATAGGTAAAAAATAATTTCGACCGTCACCCAATAAA
TGAAAAATAGCTTCCTTTGTTCTACACGCTTAAATATTCTTAACTTTTTG
AGGAAAAATCATCTTGAAATATTCTTACGGTATTCTTAGGTTTGGATCCA
ATCCTAGCCAAAATGTAGCATGTAATACACCTTGAGCAAAGATTTGGCAC
TTTTGTGAAACTTTTTAGTATTGCTGGCAATTGGCAATTTATCAGTAACG
TGCTCTAAAAATGGCATTCTCAGGTTTCGTTGCCAATAATCCATGATAGT
GATATTCTTAGGATATTTTTAATTTTTTGGCTAATTTCATCATAAATATT
CTTATAAAGTATATTTTTATAAAAAAGCGTGCATTCAAAATCAACTCGAT
AAGATCAATCTAATTACATATCCCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036154XLOC_036154Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057386-exon-scaffold_288-1575043694:608512..608569TCONS_00057386-exon-scaffold_288-1575043694:608512..608569Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:607935..608153TCONS_00057386-exon-scaffold_288-1575043694:607935..608153Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:607465..607731TCONS_00057386-exon-scaffold_288-1575043694:607465..607731Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:607090..607224TCONS_00057386-exon-scaffold_288-1575043694:607090..607224Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:606724..606885TCONS_00057386-exon-scaffold_288-1575043694:606724..606885Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:603655..606402TCONS_00057386-exon-scaffold_288-1575043694:603655..606402Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:603294..603485TCONS_00057386-exon-scaffold_288-1575043694:603294..603485Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:602856..603050TCONS_00057386-exon-scaffold_288-1575043694:602856..603050Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1575043694:599943..601093TCONS_00057386-exon-scaffold_288-1575043694:599943..601093Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:608512..608569TCONS_00057386-exon-scaffold_288-1510915933:608512..608569Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:607935..608153TCONS_00057386-exon-scaffold_288-1510915933:607935..608153Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:607465..607731TCONS_00057386-exon-scaffold_288-1510915933:607465..607731Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:607090..607224TCONS_00057386-exon-scaffold_288-1510915933:607090..607224Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:606724..606885TCONS_00057386-exon-scaffold_288-1510915933:606724..606885Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:603655..606402TCONS_00057386-exon-scaffold_288-1510915933:603655..606402Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:603294..603485TCONS_00057386-exon-scaffold_288-1510915933:603294..603485Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:602856..603050TCONS_00057386-exon-scaffold_288-1510915933:602856..603050Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1510915933:599943..601093TCONS_00057386-exon-scaffold_288-1510915933:599943..601093Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:608512..608569TCONS_00057386-exon-scaffold_288-1491911889:608512..608569Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:607935..608153TCONS_00057386-exon-scaffold_288-1491911889:607935..608153Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:607465..607731TCONS_00057386-exon-scaffold_288-1491911889:607465..607731Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:607090..607224TCONS_00057386-exon-scaffold_288-1491911889:607090..607224Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:606724..606885TCONS_00057386-exon-scaffold_288-1491911889:606724..606885Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:603655..606402TCONS_00057386-exon-scaffold_288-1491911889:603655..606402Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:603294..603485TCONS_00057386-exon-scaffold_288-1491911889:603294..603485Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:602856..603050TCONS_00057386-exon-scaffold_288-1491911889:602856..603050Clytia hemisphaericaexon
TCONS_00057386-exon-scaffold_288-1491911889:599943..601093TCONS_00057386-exon-scaffold_288-1491911889:599943..601093Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:599943..608569 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.467153	0.73393	0.315459	0.280173	6.21024	4.84451	9.05358	9.21485	1.00809	2.10563	6.15443	1.90068	3.02005	3.53238	3.48952	11.5949	6.64377	5.02496	0.156446	0.373549	4.24323	3.87743	3.14892	3.61034	5.95896	6.18836	2.44139	0.732433	0.905184	0.433455
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top