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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057382 ID=TCONS_00057382|Name=TCONS_00057382|organism=Clytia hemisphaerica|type=transcript|length=2627bp
CTCACACTgtgtgaaaaatttattttttctttttcaaaatattctttctC
GATACAACAAGATTTCttccttgtttttttctttatttggagaaaaatat
tttatttctattgAATATTACTTGCTGCAGAATTCATCAGGAGCTCGTTA
TTTGTTGATTTTATTTCTTGATCTCAAAAGATGGACCCCAAGCAATCAGA
ACAAAAGAAAGATCTAAAAGAAGTCGAAGACAAACTCGGGGACGTTCGAT
TGAAAACACCTGACGATAAAAACAACAACACCCCCGGTGGTAACCAGGGC
AACAAGAAAACCATGGAAACAGAAAATGGCGACGACAACAAGTACAACTG
TCTCGGAAACTTCGAAATCCAAAAACGTATAGGAAAAGGTCAATTTTCTG
AAGTCTTTCGTGCACGCTGCTTGATCGATAACAGTATTGTAGCGCTGAAG
AAGGTGCAAATCTTTGAAATGATGGATCTAAAGGCGAGGAATGATTGCAT
CAAAGAAATTGATTTGCTCAAATCCTTAAATCATCCCAACGTTATTAAAT
ATTTGGCCTCATTTGTGGAAAACAACGAACTGAACATTGTGTTAGAATTA
GCCGATGCTGGCGATCTATCCAAAATGATTAAACACTTTAAAAAACAGAA
ACGTTTGATCCCAGAGAAAACCATCTGGAAATATTTCGTCCAGATCACAG
CAGCTCTCCAGCACATGCACATCAAAAGAATCATGCATCGAGATATTAAG
CCTGCCAATGTCTTTATAACTGCTAGCGGTATTGTCAAGTTGGGTGATTT
GGGTCTTGGACGTTATTTCAGCTCACAAACGATAGCTGCACATTCTTTAG
TCGGAACTCCTTACTACATGTCACCGGAAAGGATCCACGAAAACGGATAC
AATTTCCGTTCCGATATTTGGTCCCTTGGATGTCTCTTGTTCGAGATGGC
TGCCCTGCAATCACCGTTTTATGGAGATAAGATGAATCTATATTCTTTAT
GCAAGAAAATTGAGCAGTGTGATTACCCACCGTTACCTTCAGAATATTAC
ACAGACGACTTGCGTAGCCTGGTGGATTTATGCATCAACCCTGACCCGGA
ACAGAGGCCAGATATCGATTACATTCACCAAGTAGCTGAGAAGATGTACG
CTTTCAAGTTAACAAAGGAACGATAATAAGAAGTCCAAATTAATCCTCTG
TTTATTATCTGCTTGTTTGTGAGAAATACTTCCCAAGCATCTTATGTGAG
AGAACTCACATGAATTAGAATGAAAATGTCATCTCAAGCTCGCTTGTTAC
TGCTCATTCTTCTCTGATAATGAAAAACAGGATGGATTGATGATGAACTC
AATTGTCATTTGACttgattcttttgaattcttttcTGAATTATGCATTC
TTAAATAGCTTAAGATTTTAAAGTCAGAAGATATTCGCCAAGGATTAAAC
CTTCGTGCATATTTTATTTCATTGATATTTAGGTTAAAAAAATAGCTTAG
GCATTCAAATTAAAGCCATTTTTAACCTACTATGGGACGTTATGTGGCAT
AGTCATTGTTGCTTTATCGGTAAATAAATTGTCTATAATAAAATTGTCGG
CGAAAGAATTTGTTGGTTATAAATAATTATCGGCTAAAAAGTATTGTCGG
TGATTATGTTTTTTTGCAAGTGTTCCtttatcaggctcgcattatgctta
gcattctattgttttcaaacaatagagccattgtttaagtaccaaaaact
gagcttgcgtatgcttataaacgttatgcttattaaagaaaaaacttgTA
TTGCGTCACTTTTTGTCGGCGAATTTTTACCGATAAAGTACATTTTTATC
TTGGTTCTGAACACGGCTTAACTCAGTCACTCAGTTTTAGGGATGTTAAA
CTAAGGATTGATTTTAGGGGGGTTGGTAGTTGACTGAATCACACATTATT
ATCAATGTAACAAAAGTGTGATTATTTTAACGGGTATtttttaatcttat
tttttatttttttcctttaatgAAATTTCCTTTGGGTTTGTTATGTTGTA
AAGCTgtcaaaaaatttgtttataaataattttttatacatTTATGGTTC
TGCCGTAAAACTAGCTGTCATTAGCTTAGTTTTTCTTTTGGAGCTACATT
GATATGAtatcaattaaaaacataattttttttataaaaaactagaaaaa
taaaaatgtgttGCCACCTGTATTTTTACGAGTACAGTAAAGAGTCTTGC
TTTCTTGCTATGCTTATATCATTAGCCTAATATTTGTTTGGTATATATCG
TATCAGCAAGCAGCACAAATTTTAAAAGCAATCCTTTAAAACAACGTTTG
TTGTAAGTGGCGATATATAATCTTTGTCTTTTTAGGTAATAACaagaaag
gttcaaggtttagCGACTGTACTTTTTTATGTCTATTATAATGTAGGTAG
CAAAAATTGAGattctatttttctttgttgttgtacactaatttttttag
tttattaGTTTGGAATGATACGACTTTAATAACtgaagtttgtttgtttg
ttttttgtattAATTATAAAATGCACATACTagtaacaaaaagaaaaaga
aaggattAAACAAAACATTTGATTTCT Run BLAST on NCBI protein sequence of TCONS_00057382-protein >TCONS_00057382-protein ID=TCONS_00057382-protein|Name=TCONS_00057382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
MDPKQSEQKKDLKEVEDKLGDVRLKTPDDKNNNTPGGNQGNKKTMETENG
DDNKYNCLGNFEIQKRIGKGQFSEVFRARCLIDNSIVALKKVQIFEMMDL
KARNDCIKEIDLLKSLNHPNVIKYLASFVENNELNIVLELADAGDLSKMI
KHFKKQKRLIPEKTIWKYFVQITAALQHMHIKRIMHRDIKPANVFITASG
IVKLGDLGLGRYFSSQTIAAHSLVGTPYYMSPERIHENGYNFRSDIWSLG
CLLFEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSEYYTDDLRSLVDL
CINPDPEQRPDIDYIHQVAEKMYAFKLTKER Run BLAST on NCBI transcript from alignment at scaffold_288:544276..549118- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057382 ID=TCONS_00057382|Name=TCONS_00057382|organism=Clytia hemisphaerica|type=transcript|length=4843bp|location=Sequence derived from alignment at scaffold_288:544276..549118- (Clytia hemisphaerica)
CTCACACTGTGTGAAAAATTTATTTTTTCTTTTTCAAAATATTCTTTCTC
GATACAACAAGATTTCTTCCTTGTTTTTTTCTTTATTTGGAGAAAAATAT
TTTATTTCTATTGAATATTACTTGCTGCAGAATTCATCAGGAGCTCGTTA
TTTGTTGATTTTATTTCTTGATCTCAAAAGATGGACCCCAAGGTATCGAA
TTACTTTTTCCTTTTCATTTCTTCATCTTATTTTTACTTGCTGTCAAAAC
CTTATATTACATACAATACTTTTTTCACACTTTAATTTCAAATTTCAAGC
TTCATAGAATTTCCTTTTGGAAGCAAGTGAAGAATGATTTTTCTTTTAAG
TATGTATATTTTAACAGTCCATTATTCAATTTGTATTGGCGTTTTCTTTT
CGTTTACTCTGTTTTAATACGTATTAAAAGTAACTCGGTTTGTTTTCGAA
CAGCCTTTATGTTTCCAGTAGTCTGTCTCAAGTCTATGTTACTTTATCTT
TTCGTTTGTTTTTAATTTCAATGTTTATGTTGTTTAAAAAAAATTCTTGT
TTAAAGGTTTCTATATGACGTGTTGCCTGCTTTTGGTCGTACTTTATTAC
TCTTAAATTTTGGTCATATCTCTTTACCTTAAAGTATTTTAGTAACCCAT
TAAATTTAGATTAGTGTTTGATTGTAGGGACGATATATTTTTGATATACG
ATAACATTTTCAGAAGTATTTTCTGTTTGAAAGTTTTTCTGAAGTTGAAC
CAATCAATTTTGATATCAATAGTTCTTATTAGACTTTAGATCACCAAGAA
AACTCCGATTATGATATAATGTTCGAATGCTAATTGATTATATTTGATAA
GTATTATTGGAAGATTGTATTTTAAGGAGAATGAATGGTAGGGGATAAAT
CTCGCCATATTTGTGTTCTTATTATTAATCCTACTTTATTCCAATAATTA
TTTCACTCTTTTAAAGGGTTCGACTCACTTTATTATTTTCTACAGCATGT
GCAAATGATTATTATTATTGTGGGAAAAGATTTTGAAGTTTTTATTTTAT
GGGAAAGGGTTTGAAAGTTAATCCACTCTTACACTACTAGAGTGAAAATG
TTTTTCTCATATTTTCATTTAGTGATTGAAGTAGATTTTTAAAGCTTGCC
AATGTTTTGTAGGGTCCAAGAGCAGGTAAAAGTCTTGTACAAACATCAGG
TCAATAAAGGGTTGTTCGTGCTTCTCACTTCGGCTTACTCTACATTTTCG
TTTTCTTTTTTATGTTTTTGTTTTTGTGTGTTTTCTCTCATTTAGACATT
CTGTCCGTCTAGTATTGATCATTTGAAGTCATTTAATTTGTGTAGCTATC
AATCAATATCAGTCAGTTACTCTAGTGTCAAAGTGCTGAACACCCCAGAA
CAATTTAACATTTCTTGTGTTGACATAATATGCTCTGCCACTTGTTTTTA
TGGAATCAGAAAACAGGAATAGAAGGGATTTTTCATGTACCTTAAAAAAA
ACTGTTATTTGTAATATCTTTTTCCACTGATGAATTTATTGAGAAAAACG
GTGGTATAGAAAAATGCTGGGAGAAATCGTGGTCGTGATTCCCGACGTGT
CCAATTATCCAAATATGTTCAATCTCCTCAAATCTTGATATATTATAACT
CTTTTATTTTAGCAATCAGAACAAAAGAAAGATCTAAAAGAAGTCGAAGA
CAAACTCGGGGACGTTCGATTGAAAACACCTGACGATAAAAACAACAACA
CCCCCGGTGGTAACCAGGGCAACAAGAAAACCATGGAAACAGAAAATGGC
GACGACAACAAGTACAACTGTCTCGGAAACTTCGAAATCCAAAAACGTAT
AGGAAAAGGTCAATTTTCTGAAGTCTTTCGTGCACGCTGCTTGATCGATA
ACAGTATTGTAGCGCTGAAGAAGGTGCAAATCTTTGAAATGATGGATCTA
AAGGCGAGGAATGATTGCATCAAAGAAATTGATTTGCTCAAATCCTTAAA
TCATCCCAACGTTATTAAATATTTGGCCTCATTTGTGGAAAACAACGAAC
TGAACATTGTGTTAGAATTAGCCGATGCTGGCGATCTATCCAAAATGATT
AAACACTTTAAAAAACAGAAACGTTTGATCCCAGAGAAAACCATCTGGAA
ATATTTCGTCCAGATCACAGCAGCTCTCCAGCACATGCACATCAAAAGAA
TCATGCATCGAGATATTAAGCCTGCCAATGTCTTTATAACTGCTAGCGGT
ATTGTCAAGTTGGGTGATTTGGGTCTTGGACGTTATTTCAGCTCACAAAC
GATAGCTGCACATTCTTTAGTCGGTAAGAATCAGCCTTTTTCACGTAAAC
ATGATCTTATATCACCTATGAACATTACAAAACATATTTTATGGGGCATG
GGGGGAAATCTTTTATAGAGATACGCTTGGGGATCGACGAGCCTTTTCGA
TATTAGCTCTCTAGTACTATCGAACCCTGAAGCAAATTTCATACAAACAA
TTTAATCTTCTCCCATAATCGGAAAAAAATGTTTAGGCTTTTGAAAACCC
CCCAACAAAATGAATTAAATGATAAATAGCAGCTCGACGCTAAATTCTTT
TTTTGTCGGTTATAATTTCATCTGTAAAGATTTGTTAAGTGGGCCGTAAA
CTGTAAGCTGTCTATGATTTCCTCATTCATTTATCGGAAATGTAGTGTAT
TCATGTTACATTTTGATGTAACAGATCTACATGACGTGTTGATTGATTTG
TTACATCGTGAAAAGCGTAAAAACTTAAACGTAAAACTTGGATCATCTTT
TAAGATAATTTCCTGATACGATTTTTGGGTTTATTTTTCCAATGACGCAT
TATCTCATCCCTATCTCGTCATACTAAAGGGTTAACGAGTTCCTTGGCAG
TCAGTAATATCCCTGCCCATGGTCCAGGCTGTTTTTAATGCCGACCTTTA
CAAAAAAGACCCGGTGACGAAACCTATATATTCCAGTGGCTGCAAACAAA
CGTTTTTTTAAGCTCTAACTCGTGTGAGTTTAAAATCTCAAATTGCTTTC
TTGAACACCATCATTTCAGGAACTCCTTACTACATGTCACCGGAAAGGAT
CCACGAAAACGGATACAATTTCCGTTCCGATATTTGGTCCCTTGGATGTC
TCTTGTTCGAGATGGCTGCCCTGCAATCACCGTTTTATGGAGATAAGATG
AATCTATATTCTTTATGCAAGAAAATTGAGCAGTGTGATTACCCACCGTT
ACCTTCAGAATATTACACAGACGACTTGCGTAGCCTGGTGGATTTATGCA
TCAACCCTGACCCGGAACAGAGGCCAGATATCGATTACATTCACCAAGTA
GCTGAGAAGATGTACGCTTTCAAGTTAACAAAGGAACGATAATAAGAAGT
CCAAATTAATCCTCTGTTTATTATCTGCTTGTTTGTGAGAAATACTTCCC
AAGCATCTTATGTGAGAGAACTCACATGAATTAGAATGAAAATGTCATCT
CAAGCTCGCTTGTTACTGCTCATTCTTCTCTGATAATGAAAAACAGGATG
GATTGATGATGAACTCAATTGTCATTTGACTTGATTCTTTTGAATTCTTT
TCTGAATTATGCATTCTTAAATAGCTTAAGATTTTAAAGTCAGAAGATAT
TCGCCAAGGATTAAACCTTCGTGCATATTTTATTTCATTGATATTTAGGT
TAAAAAAATAGCTTAGGCATTCAAATTAAAGCCATTTTTAACCTACTATG
GGACGTTATGTGGCATAGTCATTGTTGCTTTATCGGTAAATAAATTGTCT
ATAATAAAATTGTCGGCGAAAGAATTTGTTGGTTATAAATAATTATCGGC
TAAAAAGTATTGTCGGTGATTATGTTTTTTTGCAAGTGTTCCTTTATCAG
GCTCGCATTATGCTTAGCATTCTATTGTTTTCAAACAATAGAGCCATTGT
TTAAGTACCAAAAACTGAGCTTGCGTATGCTTATAAACGTTATGCTTATT
AAAGAAAAAACTTGTATTGCGTCACTTTTTGTCGGCGAATTTTTACCGAT
AAAGTACATTTTTATCTTGGTTCTGAACACGGCTTAACTCAGTCACTCAG
TTTTAGGGATGTTAAACTAAGGATTGATTTTAGGGGGGTTGGTAGTTGAC
TGAATCACACATTATTATCAATGTAACAAAAGTGTGATTATTTTAACGGG
TATTTTTTAATCTTATTTTTTATTTTTTTCCTTTAATGAAATTTCCTTTG
GGTTTGTTATGTTGTAAAGCTGTCAAAAAATTTGTTTATAAATAATTTTT
TATACATTTATGGTTCTGCCGTAAAACTAGCTGTCATTAGCTTAGTTTTT
CTTTTGGAGCTACATTGATATGATATCAATTAAAAACATAATTTTTTTTA
TAAAAAACTAGAAAAATAAAAATGTGTTGCCACCTGTATTTTTACGAGTA
CAGTAAAGAGTCTTGCTTTCTTGCTATGCTTATATCATTAGCCTAATATT
TGTTTGGTATATATCGTATCAGCAAGCAGCACAAATTTTAAAAGCAATCC
TTTAAAACAACGTTTGTTGTAAGTGGCGATATATAATCTTTGTCTTTTTA
GGTAATAACAAGAAAGGTTCAAGGTTTAGCGACTGTACTTTTTTATGTCT
ATTATAATGTAGGTAGCAAAAATTGAGATTCTATTTTTCTTTGTTGTTGT
ACACTAATTTTTTTAGTTTATTAGTTTGGAATGATACGACTTTAATAACT
GAAGTTTGTTTGTTTGTTTTTTGTATTAATTATAAAATGCACATACTAGT
AACAAAAAGAAAAAGAAAGGATTAAACAAAACATTTGATTTCT Coding sequence (CDS) from alignment at scaffold_288:544276..549118- >TCONS_00057382 ID=TCONS_00057382|Name=TCONS_00057382|organism=Clytia hemisphaerica|type=CDS|length=2988bp|location=Sequence derived from alignment at scaffold_288:544276..549118- (Clytia hemisphaerica)
GAACTCCTTACTACATGTCACCGGAAAGGATCCACGAAAACGGATACAAT
TTCCGTTCCGATATTTGGTCCCTTGGATGTCTCTTGTTCGAGATGGCTGC
CCTGCAATCACCGTTTTATGGAGATAAGATGAATCTATATTCTTTATGCA
AGAAAATTGAGCAGTGTGATTACCCACCGTTACCTTCAGAATATTACACA
GACGACTTGCGTAGCCTGGTGGATTTATGCATCAACCCTGACCCGGAACA
GAGGCCAGATATCGATTACATTCACCAAGTAGCTGAGAAGATGTACGCTT
TCAAGTTAACAAAGGAACGATAACAATCAGAACAAAAGAAAGATCTAAAA
GAAGTCGAAGACAAACTCGGGGACGTTCGATTGAAAACACCTGACGATAA
AAACAACAACACCCCCGGTGGTAACCAGGGCAACAAGAAAACCATGGAAA
CAGAAAATGGCGACGACAACAAGTACAACTGTCTCGGAAACTTCGAAATC
CAAAAACGTATAGGAAAAGGTCAATTTTCTGAAGTCTTTCGTGCACGCTG
CTTGATCGATAACAGTATTGTAGCGCTGAAGAAGGTGCAAATCTTTGAAA
TGATGGATCTAAAGGCGAGGAATGATTGCATCAAAGAAATTGATTTGCTC
AAATCCTTAAATCATCCCAACGTTATTAAATATTTGGCCTCATTTGTGGA
AAACAACGAACTGAACATTGTGTTAGAATTAGCCGATGCTGGCGATCTAT
CCAAAATGATTAAACACTTTAAAAAACAGAAACGTTTGATCCCAGAGAAA
ACCATCTGGAAATATTTCGTCCAGATCACAGCAGCTCTCCAGCACATGCA
CATCAAAAGAATCATGCATCGAGATATTAAGCCTGCCAATGTCTTTATAA
CTGCTAGCGGTATTGTCAAGTTGGGTGATTTGGGTCTTGGACGTTATTTC
AGCTCACAAACGATAGCTGCACATTCTTTAGTCGATGGACCCCAAGGAAC
TCCTTACTACATGTCACCGGAAAGGATCCACGAAAACGGATACAATTTCC
GTTCCGATATTTGGTCCCTTGGATGTCTCTTGTTCGAGATGGCTGCCCTG
CAATCACCGTTTTATGGAGATAAGATGAATCTATATTCTTTATGCAAGAA
AATTGAGCAGTGTGATTACCCACCGTTACCTTCAGAATATTACACAGACG
ACTTGCGTAGCCTGGTGGATTTATGCATCAACCCTGACCCGGAACAGAGG
CCAGATATCGATTACATTCACCAAGTAGCTGAGAAGATGTACGCTTTCAA
GTTAACAAAGGAACGATAACAATCAGAACAAAAGAAAGATCTAAAAGAAG
TCGAAGACAAACTCGGGGACGTTCGATTGAAAACACCTGACGATAAAAAC
AACAACACCCCCGGTGGTAACCAGGGCAACAAGAAAACCATGGAAACAGA
AAATGGCGACGACAACAAGTACAACTGTCTCGGAAACTTCGAAATCCAAA
AACGTATAGGAAAAGGTCAATTTTCTGAAGTCTTTCGTGCACGCTGCTTG
ATCGATAACAGTATTGTAGCGCTGAAGAAGGTGCAAATCTTTGAAATGAT
GGATCTAAAGGCGAGGAATGATTGCATCAAAGAAATTGATTTGCTCAAAT
CCTTAAATCATCCCAACGTTATTAAATATTTGGCCTCATTTGTGGAAAAC
AACGAACTGAACATTGTGTTAGAATTAGCCGATGCTGGCGATCTATCCAA
AATGATTAAACACTTTAAAAAACAGAAACGTTTGATCCCAGAGAAAACCA
TCTGGAAATATTTCGTCCAGATCACAGCAGCTCTCCAGCACATGCACATC
AAAAGAATCATGCATCGAGATATTAAGCCTGCCAATGTCTTTATAACTGC
TAGCGGTATTGTCAAGTTGGGTGATTTGGGTCTTGGACGTTATTTCAGCT
CACAAACGATAGCTGCACATTCTTTAGTCGATGGACCCCAAGGAACTCCT
TACTACATGTCACCGGAAAGGATCCACGAAAACGGATACAATTTCCGTTC
CGATATTTGGTCCCTTGGATGTCTCTTGTTCGAGATGGCTGCCCTGCAAT
CACCGTTTTATGGAGATAAGATGAATCTATATTCTTTATGCAAGAAAATT
GAGCAGTGTGATTACCCACCGTTACCTTCAGAATATTACACAGACGACTT
GCGTAGCCTGGTGGATTTATGCATCAACCCTGACCCGGAACAGAGGCCAG
ATATCGATTACATTCACCAAGTAGCTGAGAAGATGTACGCTTTCAAGTTA
ACAAAGGAACGATAACAATCAGAACAAAAGAAAGATCTAAAAGAAGTCGA
AGACAAACTCGGGGACGTTCGATTGAAAACACCTGACGATAAAAACAACA
ACACCCCCGGTGGTAACCAGGGCAACAAGAAAACCATGGAAACAGAAAAT
GGCGACGACAACAAGTACAACTGTCTCGGAAACTTCGAAATCCAAAAACG
TATAGGAAAAGGTCAATTTTCTGAAGTCTTTCGTGCACGCTGCTTGATCG
ATAACAGTATTGTAGCGCTGAAGAAGGTGCAAATCTTTGAAATGATGGAT
CTAAAGGCGAGGAATGATTGCATCAAAGAAATTGATTTGCTCAAATCCTT
AAATCATCCCAACGTTATTAAATATTTGGCCTCATTTGTGGAAAACAACG
AACTGAACATTGTGTTAGAATTAGCCGATGCTGGCGATCTATCCAAAATG
ATTAAACACTTTAAAAAACAGAAACGTTTGATCCCAGAGAAAACCATCTG
GAAATATTTCGTCCAGATCACAGCAGCTCTCCAGCACATGCACATCAAAA
GAATCATGCATCGAGATATTAAGCCTGCCAATGTCTTTATAACTGCTAGC
GGTATTGTCAAGTTGGGTGATTTGGGTCTTGGACGTTATTTCAGCTCACA
AACGATAGCTGCACATTCTTTAGTCGATGGACCCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057382-exon-scaffold_288-1575043694:548927..549118 | TCONS_00057382-exon-scaffold_288-1575043694:548927..549118 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1575043694:546796..547456 | TCONS_00057382-exon-scaffold_288-1575043694:546796..547456 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1575043694:544276..546049 | TCONS_00057382-exon-scaffold_288-1575043694:544276..546049 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1510915933:548927..549118 | TCONS_00057382-exon-scaffold_288-1510915933:548927..549118 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1510915933:546796..547456 | TCONS_00057382-exon-scaffold_288-1510915933:546796..547456 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1510915933:544276..546049 | TCONS_00057382-exon-scaffold_288-1510915933:544276..546049 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1491911889:548927..549118 | TCONS_00057382-exon-scaffold_288-1491911889:548927..549118 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1491911889:546796..547456 | TCONS_00057382-exon-scaffold_288-1491911889:546796..547456 | Clytia hemisphaerica | exon |
| TCONS_00057382-exon-scaffold_288-1491911889:544276..546049 | TCONS_00057382-exon-scaffold_288-1491911889:544276..546049 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:544276..549118 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
BLAST of TCONS_00057382 vs. Swiss-Prot (Human)
Match: NEK7 (Serine/threonine-protein kinase Nek7 OS=Homo sapiens GN=NEK7 PE=1 SV=1) HSP 1 Score: 481.871 bits (1239), Expect = 3.494e-163 Identity = 217/273 (79.49%), Postives = 254/273 (93.04%), Query Frame = 1
Query: 334 DNKYNCLGNFEIQKRIGKGQFSEVFRARCLIDNSIVALKKVQIFEMMDLKARNDCIKEIDLLKSLNHPNVIKYLASFVENNELNIVLELADAGDLSKMIKHFKKQKRLIPEKTIWKYFVQITAALQHMHIKRIMHRDIKPANVFITASGIVKLGDLGLGRYFSSQTIAAHSLVGTPYYMSPERIHENGYNFRSDIWSLGCLLFEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSEYYTDDLRSLVDLCINPDPEQRPDIDYIHQVAEKMYA 1152
D YN L NF I+K+IG+GQFSEV+RA CL+D VALKKVQIF++MD KAR DCIKEIDLLK LNHPNVIKY ASF+E+NELNIVLELADAGDLS+MIKHFKKQKRLIPE+T+WKYFVQ+ +AL+HMH +R+MHRDIKPANVFITA+G+VKLGDLGLGR+FSS+T AAHSLVGTPYYMSPERIHENGYNF+SDIWSLGCLL+EMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS++Y+++LR LV++CINPDPE+RPD+ Y++ VA++M+A
Sbjct: 25 DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297
The following BLAST results are available for this feature:
|
