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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057316 ID=TCONS_00057316|Name=TCONS_00057316|organism=Clytia hemisphaerica|type=transcript|length=1608bp
TGTTGATACACTCTTAGAGTGTATTCATGAAGGGTCAAATTAGTTGGTTA
GTTCGTACTTATTAAAGTTAAGAATGGCTAGATTGATGAAAAGATCTATT
TTGAGGAATCTTCAAAGTGCAATATATGGCCAGAAGCAGCCTTTAAGCAG
CGCATCGTATTTTCTGGCGAAAAGTATTTCTAGAATCGAAGATGATAAAA
GCACAAGGCTGTTAAAAGTACAATGGGAAAACGGGAAAGAAAACCTATAC
CCATATCTCTTTTTGAGAGATCACTGCCAATGTCCCGAATGTTTTCATCC
GTTTACAAAATCCCGGAAACTGGATACAGTCGCTGCTGTAGATTTAGGAA
TCACAATCGATGACTTCGCTTATGACGCAAGCGATGACGTTGTCGAGGTC
ACGTGGCCTGATGGACACAAAAGTCGATTCACGGCAGNATGAAGCAAGCG
ATGACGTTGTCGAGGTCACGTGGCCTGATGGACACCAAAGTCGATTCACG
GCAAAATGGCTGAAATCCCGATTTCTATCTCGGAAAGGAGAACAAATCAA
TGATCGAACTGGTTTAGATTCAGTTCAACGAGTttcttggacttcaatgg
aaaTCCGTGAAAATACTCCGTTTGTTGATTTTCATGAAATCGAAAGCGAT
GAAAAAGCTTTGAAGGGACACTTGGAAAATCTTTTAAGATATGGCTTAAG
TATTGTCAGAAATGCACCTTTGGAGTTATCAGTGTTACAAAAGATGGCAG
ATTTAATGTGCTTATCCATTGTGAGACACACGAATTATGGACCGTTTTTC
ACTGTTGAATCCAAACCATCACCTAGCAACTTGGCATACACAGGAAGTGC
GCTACCAATGCACACAGATCTTCCTTTTTACGACTATCAACCAGGCGTTC
AACTTCTACATTGCATTCGCCAATCAAGTGGATCTGAATCAGACGGTGCA
AGTCTTCTTGTGGACGCCATGAAAGTCGTTGAAGACCTCAAAGGAAATTC
TCCTGAAGATTATCATTTGCTGACGACAACAAATTTCAGATTCAATGACG
AGGGGACTGACCTCTACGGTGAATTCGATCTTCAATTTGAGAGACCTACT
ATTGGactCGACAAGAACGGAAAATTCGTCCACATAGCTTACAACAATCC
AGTCCGAGATTTTATCAACGCTCCGGCAGAAAATATACAGCGAATATATG
AAGCGTATTACAAACTTTCAGCCATGCTCCGAGACAAACACTACCAATTT
CAATATAAAATGGCGCCAGGGGATATGTTAGTATTCGATAATAATAGAGT
CTTGCACGGGAGAATGGCTTTTGATGCGACATCGTCAGATCGTAAGCTAC
ACGGCTCTTTTTTGGATTGGGACGATATTCGGTCAACGTGGAGAGTGCTA
CATAACCGATAAGGATAAACAAATTGATTTCCGGATTGGCAGTGTTGAAG
ATATATGAGGAAAAAATGATCATTCATTACATACCCATTACCGGACTATT
AAATTCAGGATATACTTATACTTGTCAACAGTATttctaagaaattttaa
aagtcttttgttcattggagtctctataactcgaacctctacaactcgaa
catctatt Run BLAST on NCBI transcript from alignment at scaffold_288:66784..77452+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057316 ID=TCONS_00057316|Name=TCONS_00057316|organism=Clytia hemisphaerica|type=transcript|length=10669bp|location=Sequence derived from alignment at scaffold_288:66784..77452+ (Clytia hemisphaerica)
TGTTGATACACTCTTAGAGTGTATTCATGAAGGGTCAAATTAGTTGGTTA
GTTCGTACTTATTAAAGTTAAGAATGGCTAGATTGATGAAAAGATCTATT
TTGAGGAATCTTCAAAGTGCAATATATGGCCAGAAGCAGCCTTTAAGCAG
CGCATCGTATTTTCTGGCGAAAAGTATTTCTAGAATCGAAGATGATAAAA
GCACAAGGCTGTTAAAAGTACAATGGGAAAACGGGAAAGAAAACCTATAC
CCATATCTCTTTTTGAGAGATCACTGCCAATGTCCCGAATGTTTTCATCC
GTTTACAAAATCCCGGAAACTGGATACAGTCGCTGCTGTAGATTTAGGAA
TCACAATCGATGACTTCGCTTATGACGCAAGCGATGACGTTGTCGAGGTC
ACGTGGCCTGATGGACACAAAAGTCGATTCACGGCAGNATGAAGCAAGCG
ATGACGTTGTCGAGGTCACGTGGCCTGATGGACACCAAAGTCGATTCACG
GCAAAATGGCTGAAATCCCGATTTCTATCTCGGAAAGGAGAACAAATCAA
TGATCGAACTGGTTTAGATTCAGTTCAACGAGTttcttggacttcaatgg
aaaTCCGTGAAAATACTCCGTTTGTTGATTTTCATGAAATCGAAAGCGAT
GAAAAAGCTTTGAAGGGACACTTGGAAAATCTTTTAAGATATGGCTTAAG
TATTGTCAGAAATGCACCTTTGGAGTTATCAGTGTTACAAAAGATGGCAG
ATTTAATGTGCTTATCCATTGTGAGACACACGAATTATGGGTAAGTGGAA
ATAAAATGGTTTTATCAATTATACAAAACGGCAAACTACTCACATACAAG
CAACATAAGCAATAGAGAGCGTCTAGATACCTCCATTCCAATAGAATACT
TTATAAAAAGATAGATATCGAGTTCAGAAATTACGTCATAATTTTCCGAG
TCTTTAGGtgaggaaaatatagaaaactctgaacgagaaaaatatatccT
ATATTGTACGAGaaaagtgtgataactggtttattgtcaacttgaaaaat
atcaacaaacttttccCTCTCCATTCAGGCCAATCTcgcacttatttcta
ccatatgtgtagatatgtaaacatccgtaaatctaccatatgtgtagata
ttagaatccgtaaatctaccatatgcgNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAACGATGACAAACCTTA
ACCCTAACTAtccaaagaacgacatatttcaaaccctaaccctaactatc
aaagaacgaaacGACATATTTTGCCCtccacaaccccgaccaaaaagtga
ctgtaccacccctagcgATTCATTCCTTTTTGTTCATCACGCTATTTAAC
TACATGTGGTGTTAACATTACGCATGCGCATAACTCTTTATGTTAAGCAT
TTACcgtatctacacatatggtagatttacgatatctacacatatggtag
attgacggattctaatatctacacatatggtagatttacggatgtttaca
tatctacacatatggtagaaataagtgtGAGAATGTGTTGCTCCATTTGT
GTCtctttctttgtgttttttttttacttcctgTATTTTGGTGAAATCGA
CATCAAAACAGTCGACTTTTCGTAAATGATTcgaatggtcattaaaatat
caaaacaatttttaaaaacttttctgaGTATTGAGAgtagaaaagaaaac
attcctTAGAATAAATTTTGGGATAAGATACCAAGGAATTATAAGAGACA
CTGGATATATGactcataaaacggtggagagcgaccattgtattttcttt
gttttagaaaacaattgGTGTTCCAGctatgtccgcaaaggacaactgtc
atggcggctcaaatgtatctgattttgaaaaatgtttattaNtgggaatt
ggatgagtgatttttaataagaaatgcaataaaaatgcttcgaaaaatca
tttaatgagggaaggagagtgaacaataatatcattactgcggacttgta
tatccagtgtataataaatccttgaagATACAAAAGTAAgtacaaaatat
gatctctcgcttaccagacTTCTTTTTTGAACGCAGTCTTGTATCAGctt
gtatttgtacggtacaatatgaaatacagcatttattagcctgggaatcc
aagcgttaaacttttttcacagtctagtttatgatattttggctgctggt
ttaacgcttggcgcaggtaactcgcctgcagggagatttttccctgcaat
gcaggttcggcctgattggccagctctcggcgtattacttagcagtactt
tcgcgcgcattttgataatttcgatgcgcacgcataatttatggaaaaag
ctgactctgcagaaaaaaggaaaacaaatgaaaatgaaaacatatagatt
catttaaaaacaaaatggctgttggctggatgtctaaatacatgtggctg
atgttttgatgtggtttttagtagttttgaaagtctttagagcNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNctgtgtcagactaatctacctgcacc
aagctctataattttagaactttgtgaggtgaggtattttttgttttttc
taaaattatgagcttggattcccaggctaagcatttatgtacgcgttttt
aACCAAttagattgctcatatttttcatgctgataaTAAACGcgtttaaa
cgccccctcgaataaacactccttctaaaattcaaaaaaattgatttagg
TGTCATCCACGAAAATAAGTTCAACAGCGAAATTATTCCCATTAAAGTAA
GCGCTTAATGGGTAAAGCTCTCTGTTTTTATTTCACAGACCGTTTTTCAC
TGTTGAATCCAAACCATCACCTAGCAACTTGGCATACACAGGAAGTGCGC
TACCAATGCACACAGATCTTCCTTTTTACGACTATCAACCAGGCGTAAGt
aacaagaaaaacattttctacTCAATCTAAAATGTATCTCTGCAATATCC
TCTCAGAATTACATCACTATTCCAAcatctgattggttgtaagtgacgta
ttaGGTAAAAAAGCCCAGAAAGGTTTACATAATGTCGTAATCACATAACA
tacttttttcaaagggataatcagatggtctgagatttTAAGGGTACCTg
ttccccgggggggggcactcgatctgaaaacgaccatacgttcggcccaa
aatttggcttctaaaatcggacccttacagtgcagtgaatttccatgaaa
aatcgtacccttacagtgcactttttcaaaatttctcgcccgtgcCGTAA
GGGCGAAAACTTTTGCaactttccaagaaaatgtggaatttttcctccaa
aattggccttttatcacaatttcctacccttacagtgcagttcagtgcag
ttttgtaatttcctacccttacagtgcactagctgaactatgaaaaacct
accNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNaatacccgaagttttcctcttcgt
cggtcaaatcgctataaaatcgcttaaatttcctcattcgccgtaccaga
tataaaaagcttccgtcgtgcctgaaTATTAATAAAGTTTTGGGTAAAGA
AAAATACAGTTCGTTATTTCCTGTAGGTTCAGTACTGAAATATCTCAATT
ATGGCAATACCATCTGATAATCTCTTTAGTGTTATCAGAATTTAAAGAAA
TTCAATGGAGATTTACTTTCATTATATATTTCGATTTCGGAGGGGTTAAA
GTGGCTTCAGGGTCAATTCAGGCCTTTTTAGAGTTTTTGGATCTTGTGAT
CTTAAGACTTATGTTAAAACTAAGACTTAAACTATCATATTCTAGGAGTA
AGttagaaaactttgaaattttgcagggAATTCCCTTTTTATCTCAAATA
CCATGACAATGCTTGTAGGTTCAACTTCTACATTGCATTCGCCAATCAAG
TGGATCTGAATCAGACGGTGCAAGTCTTCTTGTGGACGCCATGAAAGTCG
TTGAAGACCTCAAAGGAAATTCTCCTGAAGATTATCATTTGCTGACGACA
ACAAATTTCAGATTCAATGACGAGGGGACTGACCTCTACGGTGAATTCGA
TCTTCAATTTGAGAGACCTACTATTGGGTAAGCTTtaattgttgattttt
ttttaattaacacATCAAAGAATAATAACGGGTAAAAATTTGATACTACT
TTTTTCcgttgaaatatatttttcatattacTTAGAATATCTGGTACTAT
CTTCTTTCAGAATTACCTAAAAGATATTAGTTTCTTAGGGTATACAAAGC
AGGCAGTTCTAATGCTTTTTCTTTCACCTAAAAATGTAGTGATGTGAATG
ATTGTAGAGACGTTAAACAATTGAACATTTTTACGTTCAAGAAAGAAGTT
TAATGTTACTGTGATCACTCCACGCTAATCAGAATAAGTGCAGATTTTTT
AAATCAGAGCTCTTCtgctttttttccggacacacaTTTCACTCTGCaaa
cttttcaaacttcttttcagACTTGACAAGAACGGAAAATTTGTTCACAT
GGCTTACAACAATGTAGTCCGAGATTTCATCAACGCTCCGGCAGAAAATA
TACAGCGAATATATGAAGCGTATTACAAACTCTCAGCCATGCTCCGAGAC
AAACACTACCAATTTCAATATAAAATGGCACCAGGGGATATGTTAGTATT
CGATAATAAGAGACTCATGCACGGGAGGACAGCTTTTGATCCAACAACGG
CAGATCGTATGCTGAACGGCTGTTATTTGGATTGGGACGATATTCGGTCA
ACGTGGAGAGTTTTACATAGCCGACACGAATAAACAAAATGATTTTCGGA
ATGACTGTATTGCCCGTTCCTTTATTATATGAAAGATTCGGTGTGAGCTT
AGAACAGTTGTTCAACCTAGGAATAGGGATTAGTaaaattttatataata
atagacaaaaattcttaattcagcaaatatcaatcaaaagaggtgaaatc
atattcaaagagtgctcgataaaCCAACCATGAGTAGAGCTtcggaaaat
gaagatgagCAATGAAGAAGTCTGAATCAAACGACTTTATCTTGAGCCGA
ATATAGACCTTCAATTTTTCGCGTGACTTGTCTACTTGAAATTTTAACCT
TGATAaggcatggaggtataaagaaaaacaggagttgaatgtgtcggtaa
ttggtcgttaaagtcttttgatttcttttataaaatgtatcaaaagaaat
tttaagttcgctcgatgaaataagactttttagtagaactcaagtttgct
ctgaacaatctaattatcagtattgaagattctagccttttaatatacga
aaattgaataaaacTTCGTACACGacacaagtttatgttccatttcgtta
tccgttcaattttgttttgaaaagatattttctcaagccagaaaatgaaa
agttatttataagcacacacaatttcagactcaatttgtagacataaagt
cgttGGAGAATTtcggaggaaagtatcaagcaatagagttcaccttaaag
aaaacattgatcgaaaactCTTATTAATTGACGAGGGATTATCAAATttt
caggcctttttttagtccaaatattttcttaaactgatgtcagaaacaat
gaatctcgtttcaactaatttttaaagcttcaaTGACCCAATAAAATTTT
ACCAATGAATAAAAGAGCTCATttaaaatgcacgatatatgagattattg
TCCAGCatacatacatcgtaacttttttaatcgtagggcgagttggttac
aatagcatacttctccagTTTCTTTAAATCATACATCCATGGATAAGGAC
ACTtctaaaatttaaagaaataaatGGCTGGGAAAtaacaatgtttttct
tttgaagataCTACAAGTACTGCACAGTCAAATAACGAGATGTAACTAAC
TCAGTTGATAAGGCTTTAAATTGAAAACAAACTCAAAATTTGCCAATTGT
AAAGAGTTTTCATATATAAGTAGCAAACGTCGGTTTACATTGGAAAAAat
acttgtttttatttctcGTTTAGCCTGTTGTTAGTGcagattaaaatttt
ttaatcatttgttGATGCACTCTAAGAATTAAAGTATGACTTTTTCATGA
AGGGTCAAATTAGTTGGTTAGTTCGTACTTATTAAAGTTAAGAATGGCTA
GATTAATGAAAAGAGCTATTTTGAGGAATCTTCAAAGTGCAATCTATGGC
CAGAAGCAGCCTTTCAGCAGCACATCGTTTATTCTGGCGAAAAGTATTTC
TAGAATCGAAGATGATAAAAGCACCAGGCTGTTAAAAGTGCAGTGGGAAA
ACGGGAAAGAAAACCTATACCCACATCTGTTTTTGAGAGATCACTGCNGG
AAAACGGGAAAGAAAACCTATACCCATATCTCTTTTTGAGAGATCACTGC
CAATGTCCCGAATGTTTTCATCCGTTTACGAAATCCCGGAAACTGGATAC
AGTCGCTGCTGTAGATTTAGGAATCAcaatcgatgacgtcacttatgAAG
CAAGCGATGACGTTGTCGAGGTCACGTGGCCTGATGGACACCAAAGTCGA
TTCACAGCAAAATGGCTGAAATCCCGATTTCTATCTCGAAAAGGAGAACA
AATCAATGATCGGACTGGTTTAGATACAGTTCAACGAGTTTCTTGGACTT
CAATAGAAATCCGTGAAAATACTCCGTTTGTTGATTTTCATGAAATCGAA
AGCGATGAAAAAGCTTTGAAGGGACACTTGGAAAATCTTTTAAGATATGG
TTTGAGTATTGTCAGAAATGCACCTTTGGAGTTATCAGTGTTACAAAAGA
TGGCAGATTTAATGTGTCTATCCATTGTGAGACACGTAAATTATGGGTAA
GTAGAATTGGAATGGTTTTATCAATTATACAAAACGGCAAACTACTCACA
TACAAGCAACATAAGCAATATACAGCGTGTAGATACCTGCAGTCCAATAG
AATACTTTATAAAAAGATAGACACCATGTttctttgaataaacgcccctt
ctttTTAACACCCCCTTAGAATAAACACCCCTCCGTAAAGGAAAAAACCC
CGAAATAAACGCCCCTCGAACAAACGCTTCCCCCCCCCCTTACGAGGGGC
GTTTAAACAAGTAGCTGTTAGGGAGAActaaatggagaaaaatttagata
TATGTTAGTAATTGTACTCTTTCATTATTCAAACTACTGATCTTGAACAA
GGTTTCCAATCACTCTATCAAATTAACCTTAGTTGAAGATTATTTAATCA
ATGCCCTCTGCTTTTAAACGCCCCTTCGAGTAAACGCCCCttctaaaatc
caaaaatatatataatataaaatagGTATAATAAACGCCGGgggtttatt
cgaagtaatgcgATAGATGGATATAAAgaagtactttaatgggattaatt
ttggtggggaccaaatttcgcggatttcacGGATTTAGCTGTCATCCGTG
AAAATATGTCAAAGCTCAATAGCAAAATTTGATAACCATTTATCCAACAA
ATTATTTCCATTAAAGTAAACGCTTTAAGGGTAAagctcttttattttgt
ttcacaGACCAACTAACACTGTTGAATCCAAACCATCACCTAGTAACTTG
GCATACACAGGAAGTGCGCTACCAATGCACACAGATCTTCCTTACTACGA
CTATCGACCAGGCGTAAGTAACAAGAAAGAACATTTTCTACTAAATTCAT
TTATTTCTGCAATATCCTCTCACAATATCCtctttttcgcccgaacttta
aattgctgaaaacgaagaattaattaaaattcccaatatattttgaccga
gattgtcccttttgtctcaaatatcaTGACACATTGTAGGTTCAACTTCT
ACATTGCATTCGCCAATCAAGTGGAGGTGAATCAGACGGTGCAAGTCTTC
TTGTGGACGGAATGAAAGTCGTTGAAGACCTCAAAGAAAATTCTCCTGAA
GATTATCATTTGCTGACAACGACAAATTTCAGATTCAATGACGAGGGAAC
GGACTTCTACGGTGAATTTGATCTGCGATTTGAGAGACCTATTATTGAGT
AAGCAtttattgttgatttttttcactTAACACATCAAAAATGAAACTTC
ACAGTCGGTAGAAATTTTATAGTACTTTTCCGTTGAACATATTTTCTATA
TTACTTAGAAGATCTGGTATAGGGTATTTAGGGTATACAAAGCAGGCACG
CTTCAAATGGGTTTTCTTTCATCTAAAAATGCAGTGTATGAGAATGGTTG
TAGAGACgttaaaaagttgagaacattttcacattcaaaaaacaagttta
atGTTACTGTGATCACTCCACGAAAGTCCGAATACCttaagagaaagaaa
ttttggcgcgAAGAGATTTTGGCGAAGAAGCCCATTCGCAAAATTTCGGC
GGAATTTATTTTGACGactaaataaaatttctaaatttgacgataattaa
ttttggcgaacgtTGAATATTTAAGCTTATAAAAAGGatgaaaaacaggt
ttttttaaggagaaatagagactagtgtgaaagaaatttaaatttgacga
taattaattttagcgaacgTTGAATATTTAAGCTTATAAAAAGGatgaaa
aacaggtttttttaggagaaatagagactagtgtgaaagaaatttaaatt
tgacgataattaattttagcgaacgTTGAATATTTAAGCTTATAAAAAGG
atgaaaaacaggtttttttaggagaaatagagactaGTGTGAAGGAAATT
TAAATTTGacaagaattaattttggcgaattgcATATAAATGtaaatttc
tttccgccaaaatttcttctcttaagttAAGTGCAGATTCTTTATATAAG
AGCTCTTCCgttttttttccggacacaccAATTTCACTCTgcaaactttt
caaatttctttttcagactCGACAAGAACGGAAAATTCGTCCACATAGCT
TACAACAATCCAGTCCGAGATTTTATCAACGCTCCGGCAGAAAATATACA
GCGAATATATGAAGCGTATTACAAACTTTCAGCCATGCTCCGAGACAAAC
ACTACCAATTTCAATATAAAATGGCGCCAGGGGATATGTTAGTATTCGAT
AATAATAGAGTCTTGCACGGGAGAATGGCTTTTGATGCGACATCGTCAGA
TCGTAAGCTACACGGCTCTTTTTTGGATTGGGACGATATTCGGTCAACGT
GGAGAGTGCTACATAACCGATAAGGATAAACAAATTGATTTCCGGATTGG
CAGTGTTGAAGATATATGAGGAAAAAATGATCATTCATTACATACCCATT
ACCGGACTATTAAATTCAGGATATACTTATACTTGTCAACAGTATttcta
agaaattttaaaagtcttttgttcattggagtctctataactcgaacctc
tacaactcgaacatctatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057316-exon-scaffold_288-1491911889:66784..67573 | TCONS_00057316-exon-scaffold_288-1491911889:66784..67573 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1510915933:66784..67573 | TCONS_00057316-exon-scaffold_288-1510915933:66784..67573 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1575043694:66784..67573 | TCONS_00057316-exon-scaffold_288-1575043694:66784..67573 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1491911889:70122..70227 | TCONS_00057316-exon-scaffold_288-1491911889:70122..70227 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1510915933:70122..70227 | TCONS_00057316-exon-scaffold_288-1510915933:70122..70227 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1575043694:70122..70227 | TCONS_00057316-exon-scaffold_288-1575043694:70122..70227 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1491911889:71902..72110 | TCONS_00057316-exon-scaffold_288-1491911889:71902..72110 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1510915933:71902..72110 | TCONS_00057316-exon-scaffold_288-1510915933:71902..72110 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1575043694:71902..72110 | TCONS_00057316-exon-scaffold_288-1575043694:71902..72110 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1491911889:76950..77452 | TCONS_00057316-exon-scaffold_288-1491911889:76950..77452 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1510915933:76950..77452 | TCONS_00057316-exon-scaffold_288-1510915933:76950..77452 | Clytia hemisphaerica | exon |
| TCONS_00057316-exon-scaffold_288-1575043694:76950..77452 | TCONS_00057316-exon-scaffold_288-1575043694:76950..77452 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:66784..77452 + |
Blast
BLAST of TCONS_00057316 vs. Swiss-Prot (Human)
Match: BODG (Gamma-butyrobetaine dioxygenase OS=Homo sapiens GN=BBOX1 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.653e-52 Identity = 116/323 (35.91%), Postives = 171/323 (52.94%), Query Frame = 3
Query: 459 VEVTWPDGHQSRFTAKWLKSRFLSRKGEQINDRTGLDSVQRVSWTSMEIRENTPFVDFHEI-ESDEKALKGHLENLLRYGLSIVRNA---PLELSVLQKMADLMCLSIVRHTNYGPFFTVESKPSPSNLAYTGSALPMHTDLPFYDYQPGVQLLHCIRQSSGSESDGASLLVDAMKVVEDLKGNSPEDYHLLTTTNFRFNDEGTDLYGEFDLQFERPTIGLDKNGKFVHIAYNNPVRDFI-NAPAENIQRIYEAYYKLSAMLRDKHYQFQYKMAPGDMLVFDNNRVLHGRMAFDA-TSSDRKLHGSFLDWDDIRSTWRVLHNR 1409
V +TWPD H S F A WLK R S++ R + + +++ P +DF ++ DE A K L L + G+ + A P E+S L K + L+ HT + V+ K +N+AYT L HTD P + PGVQLLHCI+Q+ + G S +VD V + LK N+P+ + +L++T F D G D Y +F +Q + I LD G+ V I +NN RD I + P E +Q Y A + ++ K +F +KM PGD++ FDN R+LHGR +++A T R L G++ DWD + S R+L R
Sbjct: 74 VYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSELQL----PTLDFEDVLRYDEHAYKW-LSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT-----WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTV---TGGDSEIVDGFNVCQKLKKNNPQAFQILSSTFVDFTDIGVD-YCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIFDVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISRHLEGAYADWDVVMSRLRILRQR 382
The following BLAST results are available for this feature:
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