TCONS_00057129 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057129
Unique NameTCONS_00057129
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1539

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057129 ID=TCONS_00057129|Name=TCONS_00057129|organism=Clytia hemisphaerica|type=transcript|length=1539bp
AGTTGCAAAACCATCAACACCAGCTCCTCAACAACCACAACAACCCAAAC
CAAATGGTTTAAACAACCAATTCGATGGCCAAATGTTATGTACCCACAGT
CCTATCTCTTATAACGTGACTTTGAAAGGTGGAACGGAGAGTGGTAATTT
TACAGACCTTGGTGGTGTAGACGATATGGATTTATGTATCTCATTATGTT
GCGAGATCGCGTCCTGCCAATTGGCTTTTATGATTGGTAAACGTTGTTTA
GCAGTGCAATGCTATACGGAGGAGCTGTGTCAAACCATCAAAGCTAAACC
AAATAACCGGATGCCGAAAATTGCTTACATCAGAAGGAAAGAAAATCATC
AGAAAACTAGAGACAAACTTTCTCGCCCATTACCTCAACCATCTGGCAAC
CGCCAAGTAATTAACGCCAATCACATTCCAGAAAAATTGGCGCCCGTCTT
ACGCCCTAGCACATGTCAAGCTAGAAAGATCTACAACAACGTCACCTTGC
TTGGTGGAATGCGTGCTGGAAACTATACCGCCCTAGGGCGTGCTACACAT
TTAGAAGATTGTATAGGGCGTGCTTGTGATCTAAATGAAGGTCATCTAGC
TTTGATGCTTGGGCGGTATTGTTACTCTGTCACGTGTAATAACCAGAGAA
CTTGCCAAACCATCCCAGCTAAACCAAGTCATCTGAGACCAAAAGTGGCT
TATCTTGCCTGGACTCAAGACCCGATTGAACAAGATACAATAACAAATAT
GGCAGAGAGTGATTTCTTCGTCAATCATAAAAGATATCCACGGTGTAAAC
GGAGCCATATCATGTACAATCACACATTGAGAGGGGGCCTTAGAGCTGGT
AATTTCTCAATGCTTGCAACTGTAGATGATATTGAAGTTTGTGCTGCTCT
ATGCtgcgaagaaaaatattgcGATTTGGCCCTAATGATTGGTGATAACT
GTTATGCTGGAGATTGCACCAGTCCAGAACTATGTTCCGCTGTGCCTGTA
CCACCTGATTCATTACAACGATCACAAATCGCCTACATTACAGCACCTGG
CAGAACTAAAGCTGAAGACAAAACAGCTAACTCAGATTGGAGTTATATCT
ATCTGGTTGTCAGTGCTTTGGTTATTGGAATAAGTACCCTGGGTACGGCA
TGGACAATATGCTTATGTGCCTTGAAGAGACATCGAAGACACATGGATAA
ACTGAGAAGCATGTCACTTGCAGAAAGTTTACAGCAATCCAAACCATTAT
TAGAAACATCCATGAAAGgtAACTACTTATTCGGAGGTAATATTGGTCCA
GTTGGGACATCAAGCCGAAATGATTCAAATATAAACACTTCTAATATTTC
TGATGTGGATGAACAAGACAATAACAAAAATGGCGCAACTTGACTTACTT
CCCCATAAAAGATTCTTAGTAAcgttaatatttttataaacttttgtAAA
TACATGaatgaaaaaattacatttaCATGGTGAGAGgcacaatcatggac
aaaatatttgagacaaaaggggatttcccaacgaaattt
Run BLAST on NCBI

protein sequence of TCONS_00057129-protein

>TCONS_00057129-protein ID=TCONS_00057129-protein|Name=TCONS_00057129-protein|organism=Clytia hemisphaerica|type=polypeptide|length=463bp
VAKPSTPAPQQPQQPKPNGLNNQFDGQMLCTHSPISYNVTLKGGTESGNF
TDLGGVDDMDLCISLCCEIASCQLAFMIGKRCLAVQCYTEELCQTIKAKP
NNRMPKIAYIRRKENHQKTRDKLSRPLPQPSGNRQVINANHIPEKLAPVL
RPSTCQARKIYNNVTLLGGMRAGNYTALGRATHLEDCIGRACDLNEGHLA
LMLGRYCYSVTCNNQRTCQTIPAKPSHLRPKVAYLAWTQDPIEQDTITNM
AESDFFVNHKRYPRCKRSHIMYNHTLRGGLRAGNFSMLATVDDIEVCAAL
CCEEKYCDLALMIGDNCYAGDCTSPELCSAVPVPPDSLQRSQIAYITAPG
RTKAEDKTANSDWSYIYLVVSALVIGISTLGTAWTICLCALKRHRRHMDK
LRSMSLAESLQQSKPLLETSMKGNYLFGGNIGPVGTSSRNDSNINTSNIS
DVDEQDNNKNGAT
Run BLAST on NCBI

transcript from alignment at scaffold_285:601322..606973-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057129 ID=TCONS_00057129|Name=TCONS_00057129|organism=Clytia hemisphaerica|type=transcript|length=5652bp|location=Sequence derived from alignment at scaffold_285:601322..606973- (Clytia hemisphaerica)
AGTTGCAAAACCATCAACACCAGCTCCTCAACAACCACAACAACCCAAAC
CAAATGGTTTAAACAACCAATTCGATGGCCAAATGTTATGTACCCACAGT
CCTATCTCTTATAACGTGACTTTGAAAGGTGGAACGGAGAGTGGTAATTT
TACAGACCTTGGTGGTGTAGACGATATGGATTTATGTATCTCATTATGTT
GCGAGATCGCGTAAGTAATTTCTCAATAGTTTTTTCAACGTCCATGTAAC
GTTAGATTAACGTTCAGTTAACGCTATGTGCCAATCGTTTAGATTTATTT
TAAAAGATGTTTTTTACCATTGGTTGGATGGTAGTCTAGAGCTAGACTAC
TAGTTAACATCAGTTTTAGTAAAAAACTTCTTTTACAGTAGTAGAAAAAA
CTTACCTAGAAGTTTGTTTACTTTTCGATTGTTTGAATTAGTATACCAAC
TTCCCGTACGGCTTTTTTCTTTTTTTTTGACTTTGAGGCAGGATTGCTCC
TACGTTTTGTGTTAAAAGAATAGTGGTCTGGAAATCGAGACTAGTTGGAT
AGTTAAAGAGTTATTAATTCAGCATGACTTTTTAACAACTAGTGGGAACT
TATTGCTTAGAAAATCTTTCCCGAATATTTTCAGTTTGAAGTATTTCAGC
ACCGAAATTTTGTGATTTTTGAGACCCTCGGAACCCCTAGATTTTTGTAG
AACTTTTAAGTTTTCATATATTCAGAGCCTCGTTGTTCTAGGCTCTCCCG
GGATATTCAAAACTTACTCTATTAATAGGTCCTGCCAATTGGCTTTTATG
ATTGGTAAACGTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTGTGTCA
AACCATCAAAGCTAAACCAAATAACCGGATGCCGAAAATTGCTTACATCA
GAAGGAAAGAAAATCATCAGAAAACTAGAGGTAAGAATTATTTATTTCAA
TTTAAGATTTTTCACTGCAAGAACAAGACGAATACTAGTTGGGCTATATT
TTTTGACTTTAATCAATATTTTGGGAAGGTTACTTGAGATAAAATACAGC
CACAGAAATCTTAAATTGTTTGACGATACACCTAGAAGAATTTAGAATAA
TTCAAAATGNTAAAATACAGCCACAGAGATCTTAAATCGTTTGACGATGT
ACCTAGAAGAATTTAAAGTAATTCAAAATACACATTTTTTTCTAGACAAA
CTTTCTCGCCCATTACCTCAACCATCTGGCAACCGCCAAGTAATTAACGC
CAATCACATTCCAGAAAAATTGGCGCCCGTCTTACGCCCTAGCACATGTC
AAGCTAGAAAGATCTACAACAACGTCACCTTGCTTGGTGGAATGCGTGCT
GGAAACTATACCGCCCTAGGGCGTGCTACACATTTAGAAGATTGTATAGG
GCGTGCTTGTGATCTAAATGAAGGTCATCTAGCTTTGATGCTTGGGCGGT
ATTGTTACTCTGTCACGTGTAATAACCAGAGAACTTGCCAAACCATCCCA
GCTAAACCAAGTCATCTGAGACCAAAAGTGGCTTATCTTGCCTGGACTCA
AGACCCGATTGAACAAGATACAAGTAAGCTATGAGATATATTTCTGTTCA
AGTTTTTGTTTTAGATGCCGTGCTCGGAATTTAAACGCAGGGAAAAACTG
CCTTGCTCTCTGATTTTCTTGTAGAAAAGTGCCGTAGCGCGACGGGTGAC
AGATATTCGCCCGTCGAATGAAGATGTGCAGTGATAAACAATATCGCCGA
TAATGGAGTAAATATAAAAATATAGATATAAAAATAAACGACTCTCACTT
AAATTTGGCTTCCTGTTCCAAGTAAACAAAAACCTCTGAAAATAAGGTTC
CTTCCGATTTGGAAAGTTGTATCGCTCAATTTACAACTCAATTTTACGTC
TTCGAAAGTGCTTCGCAGTAAGGTCAGTATAATACAATATTCAAGGTTTG
CATCTTTTTATTTTCACATTTACAGTAACAAATATGGCAGAGAGTGATTT
CTTCGTCAATCATAAAAGATATCCACGGTGTAAACGGAGCCATATCATGT
ACAATCACACATTGAGAGGGGGCCTTAGAGCTGGTAATTTCTCAATGCTT
GCAACTGTAGATGATATTGAAGTTTGTGCTGCTCTATGCTGCGAAGAAAA
ATATTGCGATTTGGGTAAGTTAGAAAAACTTATCGATTTCTGTAAATTCT
GACTAGATATATATATTTATAAGTATCTTGAGTACCTCACAAGAAAGCAT
ATATGGCCCCCCCAGCGTTTTGCATGAATGCGTGAATGGGCATTTTCGGT
TGCGTGAATGCGTTAAAATTGAAAAAAAATAAAATGTGTGAATGCATGAA
TTGAAAAAACTTCCTTTTTGATTGCGTGAATGCGTGAATCTGGGCTACTT
GTGTGTGAATACGTGAGTTTTGCCTTTTTTACACCGATTGTGTGCAGTGT
TCCCGATTTTCCAATGTTTCCCCGACTTTTCCCAAAAATTTTTCTGAAAA
ATTGGGTTATTGCGTGAAACTCGAGAAATATTTGCGTGAATGCGTAAATT
TCGAAAAAAAAATTGATGATTGCGTGATTGCGTGATTGCGTGAATATCTT
TTGTTATTTTTCTGTGCAATAAAAGACATGGACTACCCTGAGTATCAGAG
GTTAAGTTTTCAAAGAAAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTATCTTATTCATGGAGAGTAAT
TAGTTTCCATATAAAGTAATACGATAATAAAGTGCACTCTCCTCCATTGG
TTATAGCCTCCCTCTGTATCCGAGCCTGGGCACGGCGTAAATATATGATT
TTGAGCTGTGCTTTTCACGGTAGACATGGACCTCTGGTAAAACAAGGCAA
TATTTTAATATGATATCTATACATGGCTTTCTTAAAGCTTGATTTAAAAC
GTAATGATTATGTACTTAGTTGCGGGGCTTGGTACCGGAGAAGCTGTTCC
TTTTGATTACTGCGTTCATCTTTTCTATCTTAATCGGAACTCAAAAGTTT
ATGTTTCTTTTACGCTCTTACATATTTGCATATTTATTTTGCAGCCCTAA
TGATTGGTGATAACTGTTATGCTGGAGATTGCACCAGTCCAGAACTATGT
TCCGCTGTGCCTGTACCACCTGATTCATTACAACGATCACAAATCGCCTA
CATTACAGCACCTGGCAGAACTAAAGCTGAAGACAAAACAGCTAACTCAG
GTACTATAATATTTAGTTACCGTATTATAAGGGGTGAAAATGGTAGTTTT
TTGTTGTTTGGGATTTGTGTTTTTGGTCCAAAATAAAAACGATTCAATAA
TATATGGATTTAGCACGTGCTAAGGCAAAGCTAAAATGTGAAGTCTGCCA
TGTTACACCTGAGAACTTATCAGCGCCATACAGTCTATCAAAAAAACGAT
AGGCAGTTTTAGACCATGTCAAACTTATCAGAGGAAGAGATTTTTAATTG
TAATTTCATTGTCTTTTAACGAGCGTTTTACTCCTTCCCATGTTTCCGAC
GTACTTGCTGTATTGTCTTAAATCCGCCAGTGCTCACCACTTGCACAACA
CAGATTTTACTCAAGCAGCCCTTATGTGTTTTAAATCATTAATCTTTGTA
GATTGGAGTTATATCTATCTGGTTGTCAGTGCTTTGGTTATTGGAATAAG
TACCCTGGGTACGGCATGGACAATATGCTTATGTGCCTTGAAGTGAGTAC
ACTCTTGTTTCAATTCTTTTTCTTGGTACTCTTTGATGAAGTTTTATAAA
TTAGAATATAGAATCTGTACGGTGTCATACATTTAAAATAAACAGAGGAA
CTTTTTTTCAAATACTTTGCTTTTTCAAGCATGCATCCTCAAACGATTTT
AAGAAATAAAAACGACAATTGTAATGCCAGTTTCAAATACAACGCGTTGC
TTTTAATTGATGAAAAACCAGTTAATAGTGGGACGCTGCTCTGCGGTATT
GAGCACTCTGTGGATTGTAAAGTCAGTTGTACTATCAATAATCAATAACC
CATCACTATCGTGAACAGATCGAATGCCCTCAACGAACAGTTAGATTAGA
AGGGTTTATAGAGGTTGGATATGTATCATCTAGAAAATTTGTGTGTCAGA
TTTATATCATCTTTTATTTTTAACCAATAGGAGACATCGAAGACACATGG
ATAAACTGAGAAGCATGTCACTTGCAGAAAGTTTACAGCAATCCAAACCA
TTATTAGAAACATCCATGAAAGGTACTACAAGAGATTGGGATCAAGGTTC
TTTATTTCATGGGGATAAATTTTTGTGGTCCTGGTACTGAGATTCATGAT
GAATTTAAACCCCCGGGGGTATTACCCTTGCTGACCGACGGGGGTGCTCC
GCTGAGGTTCGAAAAAGTGCCATGACCCGGAATGGGACTGAAATTCCAAA
ATTTTCTCAGATTTTCTACTTTTTCCCCAAATTTTCCAACAAAGGCACCC
TACGAGGGACTGATTTTCTTATTTTTGTGTTTTTGCAACCCTACCTGGGA
CTCGTAGAGGTTAAAAAAGGTACCCTGTCCAGCGGCGCATCCCCGTAACC
CATTTTGCCCTAGTACCCCCCACCGGGATTTAAACCTTAGAAAAATCACA
GATAGACACTGTTTGTGGTTCCCTGTACAAAATGTCTTTGAAAGATTTTA
ATGCGGATGGCATGTATAACAGTTGTTATCGATTATTTCTGAGTCATAAT
TTTGAGTCATAATTTCAACATAAAAAAGGGGCCACTGAGTAAAAGATAAA
AAGTAAAACCGAAAGAAATATTTTCTTTCAGGTAACTACTTATTCGGAGG
TAATATTGGTCCAGTTGGGACATCAAGCCGAAATGATTCAAATATAAACA
CTTCTAATATTTCTGATGTGGATGAACAAGACAATAACAAAAATGGCGCA
ACTTGACTTACTTCCCCATAAAAGATTCTTAGTAACGTTAATATTTTTAT
AAACTTTTGTAAATACATGAATGAAAAAATTACATTTACATGGTGAGAGG
CACAATCATGGACAAAATATTTGAGACAAAAGGGGATTTCCCAACGAAAT
TT

Coding sequence (CDS) from alignment at scaffold_285:601322..606973-

>TCONS_00057129 ID=TCONS_00057129|Name=TCONS_00057129|organism=Clytia hemisphaerica|type=CDS|length=11136bp|location=Sequence derived from alignment at scaffold_285:601322..606973- (Clytia hemisphaerica)
GTAACTACTTATTCGGAGGTAATATTGGTCCAGTTGGGACATCAAGCCGA
AATGATTCAAATATAAACACTTCTAATATTTCTGATGTGGATGAACAAGA
CAATAACAAAAATGGCGCAACTTGAGAGACATCGAAGACACATGGATAAA
CTGAGAAGCATGTCACTTGCAGAAAGTTTACAGCAATCCAAACCATTATT
AGAAACATCCATGAAAGATTGGAGTTATATCTATCTGGTTGTCAGTGCTT
TGGTTATTGGAATAAGTACCCTGGGTACGGCATGGACAATATGCTTATGT
GCCTTGAACCCTAATGATTGGTGATAACTGTTATGCTGGAGATTGCACCA
GTCCAGAACTATGTTCCGCTGTGCCTGTACCACCTGATTCATTACAACGA
TCACAAATCGCCTACATTACAGCACCTGGCAGAACTAAAGCTGAAGACAA
AACAGCTAACTCAGTAACAAATATGGCAGAGAGTGATTTCTTCGTCAATC
ATAAAAGATATCCACGGTGTAAACGGAGCCATATCATGTACAATCACACA
TTGAGAGGGGGCCTTAGAGCTGGTAATTTCTCAATGCTTGCAACTGTAGA
TGATATTGAAGTTTGTGCTGCTCTATGCTGCGAAGAAAAATATTGCGATT
TGGACAAACTTTCTCGCCCATTACCTCAACCATCTGGCAACCGCCAAGTA
ATTAACGCCAATCACATTCCAGAAAAATTGGCGCCCGTCTTACGCCCTAG
CACATGTCAAGCTAGAAAGATCTACAACAACGTCACCTTGCTTGGTGGAA
TGCGTGCTGGAAACTATACCGCCCTAGGGCGTGCTACACATTTAGAAGAT
TGTATAGGGCGTGCTTGTGATCTAAATGAAGGTCATCTAGCTTTGATGCT
TGGGCGGTATTGTTACTCTGTCACGTGTAATAACCAGAGAACTTGCCAAA
CCATCCCAGCTAAACCAAGTCATCTGAGACCAAAAGTGGCTTATCTTGCC
TGGACTCAAGACCCGATTGAACAAGATACAAGTCCTGCCAATTGGCTTTT
ATGATTGGTAAACGTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTGTG
TCAAACCATCAAAGCTAAACCAAATAACCGGATGCCGAAAATTGCTTACA
TCAGAAGGAAAGAAAATCATCAGAAAACTAGAGGTTGCAAAACCATCAAC
ACCAGCTCCTCAACAACCACAACAACCCAAACCAAATGGTTTAAACAACC
AATTCGATGGCCAAATGTTATGTACCCACAGTCCTATCTCTTATAACGTG
ACTTTGAAAGGTGGAACGGAGAGTGGTAATTTTACAGACCTTGGTGGTGT
AGACGATATGGATTTATGTATCTCATTATGTTGCGAGATCGCGTAACTAC
TTATTCGGAGGTAATATTGGTCCAGTTGGGACATCAAGCCGAAATGATTC
AAATATAAACACTTCTAATATTTCTGATGTGGATGAACAAGACAATAACA
AAAATGGCGCAACTTGAGAGACATCGAAGACACATGGATAAACTGAGAAG
CATGTCACTTGCAGAAAGTTTACAGCAATCCAAACCATTATTAGAAACAT
CCATGAAAGATTGGAGTTATATCTATCTGGTTGTCAGTGCTTTGGTTATT
GGAATAAGTACCCTGGGTACGGCATGGACAATATGCTTATGTGCCTTGAA
CCCTAATGATTGGTGATAACTGTTATGCTGGAGATTGCACCAGTCCAGAA
CTATGTTCCGCTGTGCCTGTACCACCTGATTCATTACAACGATCACAAAT
CGCCTACATTACAGCACCTGGCAGAACTAAAGCTGAAGACAAAACAGCTA
ACTCAGTAACAAATATGGCAGAGAGTGATTTCTTCGTCAATCATAAAAGA
TATCCACGGTGTAAACGGAGCCATATCATGTACAATCACACATTGAGAGG
GGGCCTTAGAGCTGGTAATTTCTCAATGCTTGCAACTGTAGATGATATTG
AAGTTTGTGCTGCTCTATGCTGCGAAGAAAAATATTGCGATTTGGACAAA
CTTTCTCGCCCATTACCTCAACCATCTGGCAACCGCCAAGTAATTAACGC
CAATCACATTCCAGAAAAATTGGCGCCCGTCTTACGCCCTAGCACATGTC
AAGCTAGAAAGATCTACAACAACGTCACCTTGCTTGGTGGAATGCGTGCT
GGAAACTATACCGCCCTAGGGCGTGCTACACATTTAGAAGATTGTATAGG
GCGTGCTTGTGATCTAAATGAAGGTCATCTAGCTTTGATGCTTGGGCGGT
ATTGTTACTCTGTCACGTGTAATAACCAGAGAACTTGCCAAACCATCCCA
GCTAAACCAAGTCATCTGAGACCAAAAGTGGCTTATCTTGCCTGGACTCA
AGACCCGATTGAACAAGATACAAGTCCTGCCAATTGGCTTTTATGATTGG
TAAACGTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTGTGTCAAACCA
TCAAAGCTAAACCAAATAACCGGATGCCGAAAATTGCTTACATCAGAAGG
AAAGAAAATCATCAGAAAACTAGAGGTTGCAAAACCATCAACACCAGCTC
CTCAACAACCACAACAACCCAAACCAAATGGTTTAAACAACCAATTCGAT
GGCCAAATGTTATGTACCCACAGTCCTATCTCTTATAACGTGACTTTGAA
AGGTGGAACGGAGAGTGGTAATTTTACAGACCTTGGTGGTGTAGACGATA
TGGATTTATGTATCTCATTATGTTGCGAGATCGCGTAACTACTTATTCGG
AGGTAATATTGGTCCAGTTGGGACATCAAGCCGAAATGATTCAAATATAA
ACACTTCTAATATTTCTGATGTGGATGAACAAGACAATAACAAAAATGGC
GCAACTTGAGAGACATCGAAGACACATGGATAAACTGAGAAGCATGTCAC
TTGCAGAAAGTTTACAGCAATCCAAACCATTATTAGAAACATCCATGAAA
GATTGGAGTTATATCTATCTGGTTGTCAGTGCTTTGGTTATTGGAATAAG
TACCCTGGGTACGGCATGGACAATATGCTTATGTGCCTTGAACCCTAATG
ATTGGTGATAACTGTTATGCTGGAGATTGCACCAGTCCAGAACTATGTTC
CGCTGTGCCTGTACCACCTGATTCATTACAACGATCACAAATCGCCTACA
TTACAGCACCTGGCAGAACTAAAGCTGAAGACAAAACAGCTAACTCAGTA
ACAAATATGGCAGAGAGTGATTTCTTCGTCAATCATAAAAGATATCCACG
GTGTAAACGGAGCCATATCATGTACAATCACACATTGAGAGGGGGCCTTA
GAGCTGGTAATTTCTCAATGCTTGCAACTGTAGATGATATTGAAGTTTGT
GCTGCTCTATGCTGCGAAGAAAAATATTGCGATTTGGACAAACTTTCTCG
CCCATTACCTCAACCATCTGGCAACCGCCAAGTAATTAACGCCAATCACA
TTCCAGAAAAATTGGCGCCCGTCTTACGCCCTAGCACATGTCAAGCTAGA
AAGATCTACAACAACGTCACCTTGCTTGGTGGAATGCGTGCTGGAAACTA
TACCGCCCTAGGGCGTGCTACACATTTAGAAGATTGTATAGGGCGTGCTT
GTGATCTAAATGAAGGTCATCTAGCTTTGATGCTTGGGCGGTATTGTTAC
TCTGTCACGTGTAATAACCAGAGAACTTGCCAAACCATCCCAGCTAAACC
AAGTCATCTGAGACCAAAAGTGGCTTATCTTGCCTGGACTCAAGACCCGA
TTGAACAAGATACAAGTCCTGCCAATTGGCTTTTATGATTGGTAAACGTT
GTTTAGCAGTGCAATGCTATACGGAGGAGCTGTGTCAAACCATCAAAGCT
AAACCAAATAACCGGATGCCGAAAATTGCTTACATCAGAAGGAAAGAAAA
TCATCAGAAAACTAGAGGTTGCAAAACCATCAACACCAGCTCCTCAACAA
CCACAACAACCCAAACCAAATGGTTTAAACAACCAATTCGATGGCCAAAT
GTTATGTACCCACAGTCCTATCTCTTATAACGTGACTTTGAAAGGTGGAA
CGGAGAGTGGTAATTTTACAGACCTTGGTGGTGTAGACGATATGGATTTA
TGTATCTCATTATGTTGCGAGATCGCGTAACTACTTATTCGGAGGTAATA
TTGGTCCAGTTGGGACATCAAGCCGAAATGATTCAAATATAAACACTTCT
AATATTTCTGATGTGGATGAACAAGACAATAACAAAAATGGCGCAACTTG
AGAGACATCGAAGACACATGGATAAACTGAGAAGCATGTCACTTGCAGAA
AGTTTACAGCAATCCAAACCATTATTAGAAACATCCATGAAAGATTGGAG
TTATATCTATCTGGTTGTCAGTGCTTTGGTTATTGGAATAAGTACCCTGG
GTACGGCATGGACAATATGCTTATGTGCCTTGAACCCTAATGATTGGTGA
TAACTGTTATGCTGGAGATTGCACCAGTCCAGAACTATGTTCCGCTGTGC
CTGTACCACCTGATTCATTACAACGATCACAAATCGCCTACATTACAGCA
CCTGGCAGAACTAAAGCTGAAGACAAAACAGCTAACTCAGTAACAAATAT
GGCAGAGAGTGATTTCTTCGTCAATCATAAAAGATATCCACGGTGTAAAC
GGAGCCATATCATGTACAATCACACATTGAGAGGGGGCCTTAGAGCTGGT
AATTTCTCAATGCTTGCAACTGTAGATGATATTGAAGTTTGTGCTGCTCT
ATGCTGCGAAGAAAAATATTGCGATTTGGACAAACTTTCTCGCCCATTAC
CTCAACCATCTGGCAACCGCCAAGTAATTAACGCCAATCACATTCCAGAA
AAATTGGCGCCCGTCTTACGCCCTAGCACATGTCAAGCTAGAAAGATCTA
CAACAACGTCACCTTGCTTGGTGGAATGCGTGCTGGAAACTATACCGCCC
TAGGGCGTGCTACACATTTAGAAGATTGTATAGGGCGTGCTTGTGATCTA
AATGAAGGTCATCTAGCTTTGATGCTTGGGCGGTATTGTTACTCTGTCAC
GTGTAATAACCAGAGAACTTGCCAAACCATCCCAGCTAAACCAAGTCATC
TGAGACCAAAAGTGGCTTATCTTGCCTGGACTCAAGACCCGATTGAACAA
GATACAAGTCCTGCCAATTGGCTTTTATGATTGGTAAACGTTGTTTAGCA
GTGCAATGCTATACGGAGGAGCTGTGTCAAACCATCAAAGCTAAACCAAA
TAACCGGATGCCGAAAATTGCTTACATCAGAAGGAAAGAAAATCATCAGA
AAACTAGAGGTTGCAAAACCATCAACACCAGCTCCTCAACAACCACAACA
ACCCAAACCAAATGGTTTAAACAACCAATTCGATGGCCAAATGTTATGTA
CCCACAGTCCTATCTCTTATAACGTGACTTTGAAAGGTGGAACGGAGAGT
GGTAATTTTACAGACCTTGGTGGTGTAGACGATATGGATTTATGTATCTC
ATTATGTTGCGAGATCGCGTAACTACTTATTCGGAGGTAATATTGGTCCA
GTTGGGACATCAAGCCGAAATGATTCAAATATAAACACTTCTAATATTTC
TGATGTGGATGAACAAGACAATAACAAAAATGGCGCAACTTGAGAGACAT
CGAAGACACATGGATAAACTGAGAAGCATGTCACTTGCAGAAAGTTTACA
GCAATCCAAACCATTATTAGAAACATCCATGAAAGATTGGAGTTATATCT
ATCTGGTTGTCAGTGCTTTGGTTATTGGAATAAGTACCCTGGGTACGGCA
TGGACAATATGCTTATGTGCCTTGAACCCTAATGATTGGTGATAACTGTT
ATGCTGGAGATTGCACCAGTCCAGAACTATGTTCCGCTGTGCCTGTACCA
CCTGATTCATTACAACGATCACAAATCGCCTACATTACAGCACCTGGCAG
AACTAAAGCTGAAGACAAAACAGCTAACTCAGTAACAAATATGGCAGAGA
GTGATTTCTTCGTCAATCATAAAAGATATCCACGGTGTAAACGGAGCCAT
ATCATGTACAATCACACATTGAGAGGGGGCCTTAGAGCTGGTAATTTCTC
AATGCTTGCAACTGTAGATGATATTGAAGTTTGTGCTGCTCTATGCTGCG
AAGAAAAATATTGCGATTTGGACAAACTTTCTCGCCCATTACCTCAACCA
TCTGGCAACCGCCAAGTAATTAACGCCAATCACATTCCAGAAAAATTGGC
GCCCGTCTTACGCCCTAGCACATGTCAAGCTAGAAAGATCTACAACAACG
TCACCTTGCTTGGTGGAATGCGTGCTGGAAACTATACCGCCCTAGGGCGT
GCTACACATTTAGAAGATTGTATAGGGCGTGCTTGTGATCTAAATGAAGG
TCATCTAGCTTTGATGCTTGGGCGGTATTGTTACTCTGTCACGTGTAATA
ACCAGAGAACTTGCCAAACCATCCCAGCTAAACCAAGTCATCTGAGACCA
AAAGTGGCTTATCTTGCCTGGACTCAAGACCCGATTGAACAAGATACAAG
TCCTGCCAATTGGCTTTTATGATTGGTAAACGTTGTTTAGCAGTGCAATG
CTATACGGAGGAGCTGTGTCAAACCATCAAAGCTAAACCAAATAACCGGA
TGCCGAAAATTGCTTACATCAGAAGGAAAGAAAATCATCAGAAAACTAGA
GGTTGCAAAACCATCAACACCAGCTCCTCAACAACCACAACAACCCAAAC
CAAATGGTTTAAACAACCAATTCGATGGCCAAATGTTATGTACCCACAGT
CCTATCTCTTATAACGTGACTTTGAAAGGTGGAACGGAGAGTGGTAATTT
TACAGACCTTGGTGGTGTAGACGATATGGATTTATGTATCTCATTATGTT
GCGAGATCGCGTAACTACTTATTCGGAGGTAATATTGGTCCAGTTGGGAC
ATCAAGCCGAAATGATTCAAATATAAACACTTCTAATATTTCTGATGTGG
ATGAACAAGACAATAACAAAAATGGCGCAACTTGAGAGACATCGAAGACA
CATGGATAAACTGAGAAGCATGTCACTTGCAGAAAGTTTACAGCAATCCA
AACCATTATTAGAAACATCCATGAAAGATTGGAGTTATATCTATCTGGTT
GTCAGTGCTTTGGTTATTGGAATAAGTACCCTGGGTACGGCATGGACAAT
ATGCTTATGTGCCTTGAACCCTAATGATTGGTGATAACTGTTATGCTGGA
GATTGCACCAGTCCAGAACTATGTTCCGCTGTGCCTGTACCACCTGATTC
ATTACAACGATCACAAATCGCCTACATTACAGCACCTGGCAGAACTAAAG
CTGAAGACAAAACAGCTAACTCAGTAACAAATATGGCAGAGAGTGATTTC
TTCGTCAATCATAAAAGATATCCACGGTGTAAACGGAGCCATATCATGTA
CAATCACACATTGAGAGGGGGCCTTAGAGCTGGTAATTTCTCAATGCTTG
CAACTGTAGATGATATTGAAGTTTGTGCTGCTCTATGCTGCGAAGAAAAA
TATTGCGATTTGGACAAACTTTCTCGCCCATTACCTCAACCATCTGGCAA
CCGCCAAGTAATTAACGCCAATCACATTCCAGAAAAATTGGCGCCCGTCT
TACGCCCTAGCACATGTCAAGCTAGAAAGATCTACAACAACGTCACCTTG
CTTGGTGGAATGCGTGCTGGAAACTATACCGCCCTAGGGCGTGCTACACA
TTTAGAAGATTGTATAGGGCGTGCTTGTGATCTAAATGAAGGTCATCTAG
CTTTGATGCTTGGGCGGTATTGTTACTCTGTCACGTGTAATAACCAGAGA
ACTTGCCAAACCATCCCAGCTAAACCAAGTCATCTGAGACCAAAAGTGGC
TTATCTTGCCTGGACTCAAGACCCGATTGAACAAGATACAAGTCCTGCCA
ATTGGCTTTTATGATTGGTAAACGTTGTTTAGCAGTGCAATGCTATACGG
AGGAGCTGTGTCAAACCATCAAAGCTAAACCAAATAACCGGATGCCGAAA
ATTGCTTACATCAGAAGGAAAGAAAATCATCAGAAAACTAGAGGTTGCAA
AACCATCAACACCAGCTCCTCAACAACCACAACAACCCAAACCAAATGGT
TTAAACAACCAATTCGATGGCCAAATGTTATGTACCCACAGTCCTATCTC
TTATAACGTGACTTTGAAAGGTGGAACGGAGAGTGGTAATTTTACAGACC
TTGGTGGTGTAGACGATATGGATTTATGTATCTCATTATGTTGCGAGATC
GCGTAACTACTTATTCGGAGGTAATATTGGTCCAGTTGGGACATCAAGCC
GAAATGATTCAAATATAAACACTTCTAATATTTCTGATGTGGATGAACAA
GACAATAACAAAAATGGCGCAACTTGAGAGACATCGAAGACACATGGATA
AACTGAGAAGCATGTCACTTGCAGAAAGTTTACAGCAATCCAAACCATTA
TTAGAAACATCCATGAAAGATTGGAGTTATATCTATCTGGTTGTCAGTGC
TTTGGTTATTGGAATAAGTACCCTGGGTACGGCATGGACAATATGCTTAT
GTGCCTTGAACCCTAATGATTGGTGATAACTGTTATGCTGGAGATTGCAC
CAGTCCAGAACTATGTTCCGCTGTGCCTGTACCACCTGATTCATTACAAC
GATCACAAATCGCCTACATTACAGCACCTGGCAGAACTAAAGCTGAAGAC
AAAACAGCTAACTCAGTAACAAATATGGCAGAGAGTGATTTCTTCGTCAA
TCATAAAAGATATCCACGGTGTAAACGGAGCCATATCATGTACAATCACA
CATTGAGAGGGGGCCTTAGAGCTGGTAATTTCTCAATGCTTGCAACTGTA
GATGATATTGAAGTTTGTGCTGCTCTATGCTGCGAAGAAAAATATTGCGA
TTTGGACAAACTTTCTCGCCCATTACCTCAACCATCTGGCAACCGCCAAG
TAATTAACGCCAATCACATTCCAGAAAAATTGGCGCCCGTCTTACGCCCT
AGCACATGTCAAGCTAGAAAGATCTACAACAACGTCACCTTGCTTGGTGG
AATGCGTGCTGGAAACTATACCGCCCTAGGGCGTGCTACACATTTAGAAG
ATTGTATAGGGCGTGCTTGTGATCTAAATGAAGGTCATCTAGCTTTGATG
CTTGGGCGGTATTGTTACTCTGTCACGTGTAATAACCAGAGAACTTGCCA
AACCATCCCAGCTAAACCAAGTCATCTGAGACCAAAAGTGGCTTATCTTG
CCTGGACTCAAGACCCGATTGAACAAGATACAAGTCCTGCCAATTGGCTT
TTATGATTGGTAAACGTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTG
TGTCAAACCATCAAAGCTAAACCAAATAACCGGATGCCGAAAATTGCTTA
CATCAGAAGGAAAGAAAATCATCAGAAAACTAGAGGTTGCAAAACCATCA
ACACCAGCTCCTCAACAACCACAACAACCCAAACCAAATGGTTTAAACAA
CCAATTCGATGGCCAAATGTTATGTACCCACAGTCCTATCTCTTATAACG
TGACTTTGAAAGGTGGAACGGAGAGTGGTAATTTTACAGACCTTGGTGGT
GTAGACGATATGGATTTATGTATCTCATTATGTTGCGAGATCGCGTAACT
ACTTATTCGGAGGTAATATTGGTCCAGTTGGGACATCAAGCCGAAATGAT
TCAAATATAAACACTTCTAATATTTCTGATGTGGATGAACAAGACAATAA
CAAAAATGGCGCAACTTGAGAGACATCGAAGACACATGGATAAACTGAGA
AGCATGTCACTTGCAGAAAGTTTACAGCAATCCAAACCATTATTAGAAAC
ATCCATGAAAGATTGGAGTTATATCTATCTGGTTGTCAGTGCTTTGGTTA
TTGGAATAAGTACCCTGGGTACGGCATGGACAATATGCTTATGTGCCTTG
AACCCTAATGATTGGTGATAACTGTTATGCTGGAGATTGCACCAGTCCAG
AACTATGTTCCGCTGTGCCTGTACCACCTGATTCATTACAACGATCACAA
ATCGCCTACATTACAGCACCTGGCAGAACTAAAGCTGAAGACAAAACAGC
TAACTCAGTAACAAATATGGCAGAGAGTGATTTCTTCGTCAATCATAAAA
GATATCCACGGTGTAAACGGAGCCATATCATGTACAATCACACATTGAGA
GGGGGCCTTAGAGCTGGTAATTTCTCAATGCTTGCAACTGTAGATGATAT
TGAAGTTTGTGCTGCTCTATGCTGCGAAGAAAAATATTGCGATTTGGACA
AACTTTCTCGCCCATTACCTCAACCATCTGGCAACCGCCAAGTAATTAAC
GCCAATCACATTCCAGAAAAATTGGCGCCCGTCTTACGCCCTAGCACATG
TCAAGCTAGAAAGATCTACAACAACGTCACCTTGCTTGGTGGAATGCGTG
CTGGAAACTATACCGCCCTAGGGCGTGCTACACATTTAGAAGATTGTATA
GGGCGTGCTTGTGATCTAAATGAAGGTCATCTAGCTTTGATGCTTGGGCG
GTATTGTTACTCTGTCACGTGTAATAACCAGAGAACTTGCCAAACCATCC
CAGCTAAACCAAGTCATCTGAGACCAAAAGTGGCTTATCTTGCCTGGACT
CAAGACCCGATTGAACAAGATACAAGTCCTGCCAATTGGCTTTTATGATT
GGTAAACGTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTGTGTCAAAC
CATCAAAGCTAAACCAAATAACCGGATGCCGAAAATTGCTTACATCAGAA
GGAAAGAAAATCATCAGAAAACTAGAGGTTGCAAAACCATCAACACCAGC
TCCTCAACAACCACAACAACCCAAACCAAATGGTTTAAACAACCAATTCG
ATGGCCAAATGTTATGTACCCACAGTCCTATCTCTTATAACGTGACTTTG
AAAGGTGGAACGGAGAGTGGTAATTTTACAGACCTTGGTGGTGTAGACGA
TATGGATTTATGTATCTCATTATGTTGCGAGATCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035988XLOC_035988Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057129-exon-scaffold_285-1575043694:606764..606973TCONS_00057129-exon-scaffold_285-1575043694:606764..606973Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1575043694:606044..606195TCONS_00057129-exon-scaffold_285-1575043694:606044..606195Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1575043694:605401..605778TCONS_00057129-exon-scaffold_285-1575043694:605401..605778Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1575043694:604810..604998TCONS_00057129-exon-scaffold_285-1575043694:604810..604998Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1575043694:603174..603329TCONS_00057129-exon-scaffold_285-1575043694:603174..603329Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1575043694:602682..602772TCONS_00057129-exon-scaffold_285-1575043694:602682..602772Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1575043694:602152..602243TCONS_00057129-exon-scaffold_285-1575043694:602152..602243Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1575043694:601322..601592TCONS_00057129-exon-scaffold_285-1575043694:601322..601592Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:606764..606973TCONS_00057129-exon-scaffold_285-1510915933:606764..606973Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:606044..606195TCONS_00057129-exon-scaffold_285-1510915933:606044..606195Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:605401..605778TCONS_00057129-exon-scaffold_285-1510915933:605401..605778Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:604810..604998TCONS_00057129-exon-scaffold_285-1510915933:604810..604998Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:603174..603329TCONS_00057129-exon-scaffold_285-1510915933:603174..603329Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:602682..602772TCONS_00057129-exon-scaffold_285-1510915933:602682..602772Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:602152..602243TCONS_00057129-exon-scaffold_285-1510915933:602152..602243Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1510915933:601322..601592TCONS_00057129-exon-scaffold_285-1510915933:601322..601592Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:606764..606973TCONS_00057129-exon-scaffold_285-1491911889:606764..606973Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:606044..606195TCONS_00057129-exon-scaffold_285-1491911889:606044..606195Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:605401..605778TCONS_00057129-exon-scaffold_285-1491911889:605401..605778Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:604810..604998TCONS_00057129-exon-scaffold_285-1491911889:604810..604998Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:603174..603329TCONS_00057129-exon-scaffold_285-1491911889:603174..603329Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:602682..602772TCONS_00057129-exon-scaffold_285-1491911889:602682..602772Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:602152..602243TCONS_00057129-exon-scaffold_285-1491911889:602152..602243Clytia hemisphaericaexon
TCONS_00057129-exon-scaffold_285-1491911889:601322..601592TCONS_00057129-exon-scaffold_285-1491911889:601322..601592Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057129-proteinTCONS_00057129-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_285supercontigscaffold_285:601322..606973 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05335	0.0520246	0.0604056	0	0.179864	0.170557	5.14424	6.58183	1.4611	1.36432	3.9457	4.88548	6.65276	5.14027	4.42291	10.3382	7.38916	6.07534	0.0283561	0	3.14649	2.45308	3.02792	2.44695	2.69214	2.70939	0.658381	0.27325	0	0.12066
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057129 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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