TCONS_00056988 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056988
Unique NameTCONS_00056988
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length942

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056988 ID=TCONS_00056988|Name=TCONS_00056988|organism=Clytia hemisphaerica|type=transcript|length=942bp
ctagtgttttatatacgATATCTAATAAGCGACCTCGATTTCAACGTACT
TGAACAAGATGTTCCATAAACATTCCTTTTGGCCGCCATTTTTAAGGAAC
CCTGCTTCTGGTTCACACATCGGGAACACATCGCTCATTATCCAGCACGG
TTTAGGTTTGGTTGCTCATTCCCTCATTTGTCATTTTCAGCTTGTTTTGA
ATCGTAGAAGGGTAGAATTTAAACAAAATGAAGCTTTTGATATTGATATC
GATCATTAGTTTTGTGGCTGGAGAAAGCTTGGTCTTGACAAAAGACAATT
TTGACCAACATGTAATGGACCCATCTAAAAATGTTTTGGTTGAATTTTAT
GCTCCATGGTGTGGTCACTGTAAAAATCTTGCTCCAGTATATGAGAAAGT
AGCTGAAACATTCAAGAATGAACCAAAGTGTATTGTTGCGAAAGTTGATG
CAgattctgaaaaagaaattggctCACGATTTAGTGTCAGTGGTTTTCCC
ACCATCAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTACTCTTC
TGGACGATCTGAGCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCA
CCAATCGTGTGTCAGGAGGTGGTATTGATGATAAGgCTGGAAGAATCGAT
GCTTTTGACACAGCTGCAGAAACCTTCATGAAGAATCCAGATGAACGGGA
AAGTTTGATCGCACAATTGGCCGATACTGCTGCTGGTGAAAGTGATCCCG
ACTACAAAAAGTCTGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAA
GAGAAGGGAAACGAATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAAT
GCTTGGTGAGATTATTTCTTTGTGATTTTCATtataaaatcctaaaaaag
tTTTCTTGTGAGTTTTTAATCACTCACGCGCCTTGATCAGTC
Run BLAST on NCBI

protein sequence of Putative disulfide isomerase

>TCONS_00056988-protein ID=TCONS_00056988-protein|Name=Putative disulfide isomerase|organism=Clytia hemisphaerica|type=polypeptide|length=215bp
MKLLILISIISFVAGESLVLTKDNFDQHVMDPSKNVLVEFYAPWCGHCKN
LAPVYEKVAETFKNEPKCIVAKVDADSEKEIGSRFSVSGFPTIKFFSKTN
KDGEEYSSGRSEQNFIDFLNEKCGTNRVSGGGIDDKAGRIDAFDTAAETF
MKNPDERESLIAQLADTAAGESDPDYKKSGEYYVKVMKKIQEKGNEYVTK
ELARLQRMLGEIISL
Run BLAST on NCBI

transcript from alignment at scaffold_284:1493412..1507921-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056988 ID=TCONS_00056988|Name=TCONS_00056988|organism=Clytia hemisphaerica|type=transcript|length=14510bp|location=Sequence derived from alignment at scaffold_284:1493412..1507921- (Clytia hemisphaerica)
CTAGTGTTTTATATACGATATCTAATAAGCGACCTCGATTTCAACGTACT
TGAACAAGATGTTCCATAAACATTCCTTTTGGCCGCCATTTTTAAGGAAC
CCTGCTTCTGGTTCACACATCGGGAACACATCGCTCATTATCCAGCACGG
TTTAGGTTTGGTTGCTCATTCCCTCATTTGTCATTTTCAGCTTGTTTTGA
ATCGTAGAAGGGTAGAATTTAAACAAAATGAAGCTTTTGATATTGATATC
GATCATTAGTTTTGTGGCTGGAGAAAGCTTGGTCTTGACAAAAGACAATT
TTGACCAACATGTAATGGACCCATCTAAAAATGTTTTGGTTGAATTTTAT
GCTCCATGTAAGTCCTAAATCTTTGTTCTTCTAAATATAATTTTTCTTCT
AGTTGTTGTGTGTTTAGGCCAATGGAATTNTCTAAATCTTTGTTCTTCTT
AATATAATTTTTCTTCTAGTTGTTGTGTGTTTAGGCCAATGGAATTGGAT
TTCAAATTTACCGTAAGATCCACACTTTCCAAATTTAGCGACTCCCCAGA
AGTCAGGCAACTTTCGTTGACGTCAAACCAAATGTTTCATTTTTTTCTAT
GTATGCTAAAGTGTTCCGGTTTTTACTAAAAGAAAGCCAGTGATCTAAGC
TTTCCAGCAGTATACACCGTGAGAGGTCCTAAATCCGACACCACTGCCTA
ATTCCGACCCCCCAACACTTGCGTTTGGTTTGGGAACGCGACACGTGCGT
TTGGTTTGGGAACGCGAAACACGAACGCAAACTACCCATGTCTAAACTTT
TCAATATATCTCCAGAACTAACAGATTTTTTGAAATTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTCTTTCTAGAAATCCAAACATAAATTGCATAGCTTTTACCAA
AAAATAGCACTTTAGGATCAGAAACAGTCAAAAACCAGCTTTTTCCAATT
TTCTTCGAGTTACAGGAATTAATTCCTTGTTTGTTTTGATCTGAAATTTT
CAGTAGGGGTGGCCTACATGGTTCCCTTGCTCATATCAGGGGGGCCCGAG
ACGGGGGTAAGAGAATTAAAGTTTTTAAGTAAAATCTTAATTATCACCCA
AAAAAAGTGCCTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTAAATAGATTGTCCCAGCCTTATCCCTCTTTCAGTAAAGCT
TCCTATACCTTTTGTCCTTCAGAAAAAACAAAAATATTGGCCTTAATTGC
TTGCTTTCAGTTCTTGTAGCCAGTAGTGTGACCCCCTGTATTTCTATTTT
GTGACCCCCTGTATTTCGCGCGGGTTTTTAATAGAGATGTCTCACATGAC
TCAAATCCCGCAGTCTTATTGGACTAGAGAAAGCGAAAGCGAAAGTGAAA
TCGCGCGATCTGATTGGATGAAAAAAGACCGCGGGAGCTGGAAAAGAATG
GAATTCTCTAGAATTCTCATTCGAAAAACAAGATGGCGGCGAGAAAAGCA
CGTCTTTTGCTTTGGACGAAAGGTTGTAAATTCTGGTTGATTTTAAGGTT
TTATCTTATCTCATCTCATTTACTTTAATTAGTAGAAGCTTCTTCAATGT
TTGGGGATGGTAAGTCTGTAAAAGTTATTTGTTTTTTGGTGGAAATAAGT
GTTTAAAAAAGCATTTTTTGTGCTCAAGGTTTATTTTTCTTCGCAAATTT
TTGTCTTCAATCTTAAATAGACGAACGAGTATTTGACTGATGGTTATGAT
TTTTTCACAGAACGTAGTAAAACTATTCAGGAACTTAGACCTTTTTACAG
AATTTCAAAAAATCTGTTAGTTCTGGAGATATATTGAAAAGTTTGCGTTC
GTGTTTCGCGTTCCCAAACCAAACGCACGTGCTGTAATGTCAAGATGTCA
ATTAATGTAATTAAAAAGTGTGAGTGTTGTAAAAATAATTACCCTTTATT
CTGGATCAGTCATAAAACGATAACAGTCTTGTAATAAAAGTGACTTGAAC
AGGAAAAATACGAAACAACTTGGACTGGTTTCCATCAAGAAACAAACAGA
CTAAATTGTAAAAATGGCGCAAAGTTGAAATAAGGGCGGATACGGTAGCA
CTTAATTTGAATAACGAATATCGAATCAATGAGGCGGCAACTATCAACGC
CCTCTTTACCACCCATAAGTCCGGATGTTTATTTACAGAAGGCTCGCAAT
CAAGCCTAGTGTGAGTTTAAAGTAATAAAAACCAGGCTTGATTACGTAAC
GTTTCAAAATGAGCACGCTCGTACACAGACCTCTTTTATATTTTCGTGTG
CTTTGGAAAATCAAAACATNNNNNNNNNNNNNNNNNNNNNNNNTGTTGTT
ACTACTGTTGTCATTTATGACGTTGTGCATATTGCAATAAAAAAATATGT
TTTGTTATAAGAAGCAATTATTGTTATTTGGTTCAGTGTATCAAATGTCT
CAGTTTAGTTGACACTTTGGTATCTTCGTTGCGTCACAGCGAAAGGTTTG
TTTTTATTTTAGTTTGTATCTTTGAAAGACCCCATCGGATTTAGGCAGTG
GAGTCGGATTTAGGACCTCTCACGGTAACACTGTGGACTCGGGCTAGACA
GCAAATTGGTAAAGTGCTAAACGTTTTTGCAACATTAATTGTCTTCTGAC
AGGAAACAGAATGCCCGCAGAACAGCCGCGGAACGCCCGCTCGGGAAAAA
AAATAAAATAAAAAATAGAAAAGTTGTATTTTTTACTGCTCTATTCACAT
ACTGAATTTGAAAGATCTTTTATATGTGGCATTCTTTTGCATACTTAAAA
CTTAAAAAAACTGACTTTTGTCCCGCATAAGGTACAAAGTTCAAATATAC
GTTTCCCGTAATTTTTGAAGAGTTGGTTCTATACTGTCAACATAGTCAGC
GTTTTGATCATCAAATGTTTTTAAGATTTTTATCCGCAATTTTTCAAGGA
TTTTTTGCATTAAAAAGTGCTATACAACTGCTTTTGGCACGGTCATGATA
TGTAAAATAATGACATTACAGCTCACGAACTTGACGATTCGGTTAACCTG
ACAATTCTTGTCGCCTGAACAAACAGTTACATCAAAATACCTTGAAAATG
TCAATATGAAAATTGCGTAATCAGAGAACGTATGTCTCGCTCATTATAAA
AAGGCTGAGACAAACTTTGAATAATTGGATTGTAACATCGAGTTAGTCTC
TTTTGTTAAGTCACCGGGGGTAAATAAAACAGACCTTGATACATTTATCG
TTCGTTTCAACTCGACGATTCGTTTAAAACTCAGCCTCCTAAATATTTGG
GGTAGGTAAAATATGTACAAAGAAATTCATACTTTTCCAACCCGGTGAAT
CTTTAAAAAAGAAGCGAACAATAAACCTTTTTGCTTTTCCATCCGCCATC
TTGAATTGTATGCAAAAATACAGGAACGAAAAAGCCGTGGTTGGATTTAG
TTGGAAAGTATGCAAAACATATGCAAGTTTACACAAAGATTAAAAAGACA
ACAAAGCATCTTATAAATATAAATTTTATAATCATTAGAACAGTAAAAGA
TGAATTTCTTAATCCAAAAAGAAATCTTTACCGAACAACAAAAGCCTTTT
AGAAATTTGTTCTTAAAGACATAGCATATTTTGTTTTCATGGCATTAAAA
AATTTCACGGAGACGGAGTACACACATTAACTTTCAAAACACGCAAACTG
AAAGCAGTAATTATGACGTCACGCATTCAGCGGGTTTAGATCGATGTTTT
GATTTGATCGTTTGGCGGTTCTATTCCCAGGAGAATAATTTACCGTCAGC
CTTATAAGGATTATTTTTGTACCTTCGCGGGTGATTTTTCAGCTTGAGTT
TATGTCTAATGTTATGGTTTTTTGAAGTGCTTGTTCTAAGAGATGGGCGA
ATTTGACTATTTCTAGTTTTCAAAAGAAGCAAATTTAATCCTTCTTCTAC
AAGATTACACTTTAATATAATGCCAATTATGCATGTAAGTTTTATATTAA
TACTTTCTGTTTGCATATGTTTTGCATACTTGCTAAGGGAATTTCACCAC
GGCAATTTGGCCACCATAATTTTTGCACACAATTCAATATGGCGGATGGA
AAGGCGAAAAGGTCTATATAATTACCTTAGTTCCATATAAGCCTCTTCGG
TGGCGAGCGTCGTCTACTCTGACGTAATTGTAAAATTTTTGTGATGGGAG
TTTGGCATATGCTTGTACTCTGTGCATTTACATTCGTTATAGTGTAATCT
TGTTTGGGGAATTATGAAGTTCTCTGGAATTTCGATTGCATTTATTCAAG
TTGATTTTTTATGACTTTTAATGGTACTTTTTCTAACGAGTTTGATTACT
CTGTTCTCACACTTATGTCTTTTTTTCGCGTCCTTTTCCGTGATTACTTT
TATTTATATTTTTAAAGACAGGTAAAGAAGGCATATTGATGTAACTGACA
AAGCTATGTTCAGAGCGCATTTTCCCTATGATTTAAGCACCCCCACGACC
CCTATATTCAGAGCGCATTTTTACAATGATTTAAGATGCCGACCAACCAA
TCGACTGTCTCATATTTTGTAATAGTCTGAGAAAAAAAGAAGAAAAGTTT
ATTATTTTGCTTTCTCTCAAGAAAATTAGAAAAATATTTTTTTGTATTCA
TACAAAAAGTTTGCATGACAAATGTCATTCTTTTGGTCAATGATGTAGCT
AAACAAAAAAACTTCAAAAGAATTCAGCTTCTTAGTTTGTATTTATCATT
TTGATTTATTTCTTGCAAAGCACATAATTTCTAAAACAGGCAAAATATCT
AATCATGGTGGCCAGCAACCCTTGAATTCCTTGGAAGTCTTGAAACGGCC
TTGAATTTTTTCCTGACCTTGAAAATTTCTTAGAAACCCTTGAAAAATCA
ATATTATTTTAGGGACCCTTGAGGTGCAAGATTTATACCCTTAAAACCCT
TGAAATTTCAAATTTGGCCATTTTCAGCCATTTTAACTTTCAGAAATATT
AACCTGTTAGGTGCTGCTGGAGTTGTATGAGATTGTGGTCGTGTTACAAA
AATACAGGCTGTTTTTAGGATACAAATAATATCTCTGAATATCTATCTGA
AACTTTCTCCAGACCTTCCCCATAGGATGCTTATGCCTCAGGAAAAAGTC
ACCTAAAATTGCCCGCAGCCAAACGCCCACGCCATAACTTCTCCAAAAAT
CTTCTTGATACATAGAAAGGCTATTGTTTTCGCTAGATGCGAAATTAATG
ATATAATATGTTATATACAATTAAATTGATATAATAATAGTATACCAAAG
CTATTCTGCAAGCTAAATCTGCTCTGAATAATTTTAAAATTGGCAAAGAT
TTTTAAACAGAGCGCGGGCTACATGTGCTTTTCTGCCAGAAATGGCAGAA
ATACCTTGAGTGGATAAATTTTGGCGTGGATTTAATTTGGCGATTGGCCA
AAATACAAATTTTGGCGAGGATTTAATTTGGCGATAGATCAATTTTGTAA
AATTTGACGAGGATTTAATCTGGCTTATTGGAAATTTTTCCACCTGAAAT
AGTGAAAATTACTCAAAATTATACTAAAAAGTTGTGATTTTTGTTAAATT
TGGAGGGGTTTTAATTTGGTGAATTGCCGAATTTGGAAATTTTGGCGAGG
ATTTAATTTGGCGAATTTTGGCTGAATTCGCCAAATTGGCCAAATTTAAT
CCCCGCCAAAATTTATCCACTTAAGGTAAATATATTCATTTTTTCACCAA
GAGACACTTTGAAAATTCTTTTGATTGCTATAAATTGGCAGTTCACAGCT
GGAGTAACATGTTGATTATCACATTTGTGATATTTATTGCTCTGACAGTT
TTTTTTGGGTATTTCATTAGGTACTTCATGGATGGGCTCCATGCTTTACA
ACTACCTGCTACTAATCGCACTGACTCAACTTCAGTATTTTTATTGTCTA
CTTGCATGCTCAATTGTAAAATTGATAGATAAAAATGCAGCTACAAATCA
GACCATTTTTGAAGTCTCCAGCCTGTCCCAAATTTTTAAGCCAGTCTGGA
ATTGATGCACATCACGCCGGATTTATTCAAGCCTAGTGATCAGGCCCTCT
AAAATCAAAAAAAAGAAAAAAGAAAAACGACACCGCCAGAAATTCACCCA
AAATGATCAAGTGTGCAAAATTTTAGCCAATGGGACAATTTTTGAAGCTC
CTCAGTTATCTCTAGGATTTGACAAATAGTCCAGATCAAGCTTGATAAGC
TTTAAGGAGAGTTGTCTGCTCAAAGGGTTACCTTCAACCAAGACATACGC
TGCTGTCATTGTTTGTGTCAGTGTCAAACTCATCACCTTCAAATTTTCAA
TTTAAGCTTCAAGGACAGGATGAGTGGTCCTTGCTCCATACTGTCACATA
ATTTTGACTATCCTATCAGACACGTGTAATTGTTATAAAAACAAGATCAT
TAATCTTTACGCTGCTTTCTGAGGAGATAAGTTGGTTGTGTTGAGTTGCT
CAAAGAAAAAGTTTGATTCCCAGTTTGCCCTTCATAAGGAAAAGAAATCT
TGCAATTTAAACCATGCAATTCACATTAAGCTGTCATCAATTAGTATTGG
GGTGGATATGGAACTATAAAAAAATTAAAATGGGCTGCTAATTAGCATTT
TTAACCGTCTTCAATGAGGCCCCCCAGCGGACCCTCAATTCACGCAATCA
CACTTTTTTCTCGAAATTCACGCATTCACACAATTTTTCCTCAAGTTTCA
CGCAATAACCCGATTTTTCAGGCAATCTGGAAAAATGGGGAAACATTGGA
AAATCAAGAAAACTGCACATGATCGGTGGAAAAAAGGGAAAATTCACGTA
TTCACGCACAAAATAGCCCAGATTCACGCATTCACGCAATCAAAAAGTGA
ATTTGCACGTTCACGCAAATTCTTTCAATTCACGCATTCACACATTTTTT
TTCCAATTTTCACCCATTAACGCAACCGAAAATGCCCATTCACGCATTCA
TGCAAACCGCTTGGAGGGCCCCTTCAATTTGTTGGTCAATAACTGCAGGT
CTTAATGCTCTGAGTATGTTTTCAGTCATGTCCGTTTTTTTTTCAAGATT
GGCATCCCATTCAACAATTTTTTACATTTACAACTTCTTCATTTCGATTT
TAGGGTGTGGTCACTGTAAAAATCTTGCTCCAGTATATGAGAAAGTAGCT
GAAACATTCAAGAATGAACCAAAGGTATGATCAAGATTAAAACCTGTGCT
TCACTACCACCATGGCTCCGAATGGGGTTCTAGGTCCCCCCAATAAATTN
ATCTGTGCTTCACTACCACCATGGTTCCGAATGGGGTTCTAGGTCCCCCC
AACAAATTTAGGTTCCCCTTAAGTTTTAGGTATTTAAAATCTGAAGCCCG
ATTTTCAAAAAATAATTTTTATTTGTCCTATTTTTATCTGATTCTCATCA
TCAGGTAAGTCCATTCAGCATGCTGATTGTTATTTTGATTTTTAGCCTCG
TACCTTTTTTAGACCTACCCCGGTGGAGGAAATTAACCTTTGTCCGTTCG
TTTGTTCACTCGTTCGTCCGTCCCTCTGTTTGTCCGTCTGTTACCAGCTT
TTCTCAAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACGAAGATGCA
AAATGGCGATGACCAAAATGTGATGGTTTTCGAAAGAAAAAAAATTGGGC
AAATTTGGTCTAAAAATCACCCTAAAATAGGGTGACTTTTAGATTTTTCT
GATTTTTTCCAGAAAGATAGGTTTTCAAAAGAGAAAAAAAATTGGGCAAA
TTTGGTCTAAAAATCACCCTAAAATAGGGTGACTTTTAGATTTTTCTGAT
TTTTTCCAGAAAGAAAGAGGGCAATTTTGTTCAAAAAAATGGCCAAAACG
ATTTTTCCTGGAAAATTCTTATTCACCGTAAAAAAGCCTTATGTAACTTT
TCTCCAAGATTGCTTAAGTCAAAATCATGAGCTTCTGAAATCATGAGCTT
CTGAAAAATCACCAAAAGTAGTTTTTGTTCGCTAAGAGTATAGGTGAAAT
AGTACATGTCAAATTTGTTATCTCTTTTGTCGAAATGTTTGGCTACACAC
ATCCAATATTAGGTATATATTAGATATATATCTTGACATTAGGGGATACT
AATCGTGTATTAACTTCCCGTCTGAGAGTTACCTCCAATAACCTCTGTCA
ATTGAAATTTTAAATATCTATTCTATAAAACTTACTAATCAAGTTAATTA
AGTTTCTAAAACTCAAAAGACGGGGTAATTTCTGGATGGGAATTTTATAC
ACAACATCCATCCCCTAAATCAAAACAACATAGAGGATGCGTGCAGCCTA
GTGAAGTGTTTAGACCTAAACTATAGATCGAACAAAGCACATTCAAAACT
CGAGGATAAATAATTCTTCTCTCTGCAGTTCTCCAATGGTTGTGTGTGAA
AACAAGGGAATTACTTTTTTCAAGCTAGCTTCAAGCCAAAATCATGAGCT
TCTGAAAAATCTGCTGTACCACTGCAAGTAGTTTTTCTTCGATAAGATAA
TCGATCAAACAAAGCACATTTCCAATACACCTTTTCGACCGTAGCCGCTA
ATTGTCCGTTTTACCACCCTAAAACCGTCTCAGTCTTTTTTTGCACCTAT
AAACAATAGAAAAAAGTTTCAAAAAGTATTGGATCGAGTTTAGGGAGATA
ATATTAAATAATAAAGTGGCATGCACCTGTCCGCGCGGCTACAGTCGAAA
AGGTGTATTCGAAATTTTCTTGCATACAACAGTATCATTTTTTCTATCAC
CTTTTAACCATTCAGTGATGAATGGCGTGCTTTTTATTTCAGTTTTCCTT
CCTGCTTCTGTGCTGGACATTATCATCTTTCTTTTCTAGTTTTATTTCTA
CTCTTAGGTTCCAAATAAACGCCCCCCTGCTTGTTAATTTTTCGAAAATT
TTACACCCCTGACCTTATTAGGACCCCCCCCGTTTATTAAGAATATTTTC
AGCTGTCAAAGAGAAGGCCCCTTATTTTGCTCTAAATAGCCTGATTTTAG
CCTATATTTACCTTATTTTTGGGTTTTCAGAAGTACAATTTCCAACCCCC
CCCCCCGTTTATTAAGAATATTTTCAGCTGTCAAAGAGAAGGCCCCTTAT
TTTGCTCTAAATAGCCTGATTTTAGCCTATATTTACCTTATTTTTGGGTT
TTCAGAAGTACAATTTCCAACCCCCCTGGCAATTAGGTCCCCAACCCTTT
CATTAAAATCTCGAAAATTTTCTAACCCTCCCCCCTGTTTAGTTTATTCA
AACCCCCCTGTTTATTTGGAACCTTAGAGTATCTGACTTTCATCAGGTAG
GTCCATTCAGTAAGTGGCTTGTTTTAATTAACATTACACATGTTACATTT
TCTAATCTTTTGGTATTATATTCAGTAACAAACTTGACAACTCCAGTAAG
GACACAGTATAGACAACTCCAGCAAGGAGTGTAATAATGTCTCTGTTGTA
AAAAATTCCTGCTTTTTTTCAGTGTATTGTTGCGAAAGTTGATGCAGATT
CTGAAAAAGAAATTGGCTCACGGTAACATTTCTCACTTTATCCCCGTCCC
AGTTTTGTTTAAGTAGCTGAAAGATTCTTCAGTTTTCTTATCATTCTGTA
ATTTGACAAAATCTCATTACACAAGCTTGAAATAGCAAACTTTATTTTCA
ATAAATTGCAAAGTTTCTTTTTGTCTTTTCAGATTTAGTGTCAGTGGTTT
TCCCACCATCAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGGTAA
AAGGTTGTTTTTAGTTCATGAAAATAATGTTCAATTTTATTAAATCACAG
AAAACTCAACCTTCGAATAACATGGANGACAAGTTTTTTTAGTTAATGGA
AATAATGTTCAATTTTATTAAATCACAGAAAACTGAACCTTCGAATAACA
TGGAGAGAAGTAATGTCTAATGTAGATTCATTCTCATCTGACTGATTCTT
TATTTGTATATTTGCAATTTATTTCAATAGTACTCTTCTGGACGATCTGA
GCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAATCGTGTGT
CAGGAGGTGGTATTGATGATAAGGTAATTTAAATTGAAAATCCACTATTT
CTATTTTGTCTCTGAATGTGAAATTAAAACCCATTAGCCATAAGGAGAGA
TTGGGAACCAAGAAGAATGGATGGGATGGTTAATAAAGGAGGATGGTTAA
GGGAGCTCTGAAAAGGAAGAATCATTTCGAAAGATGTGAAAACTACTTAC
TTTAATTATAGCATGTAGTTTCATTTCTTTCTAATTAGCGAGTTCTTGAT
TAGCTTTTGTTGGACCTACCTCAAATAAATTCCTACCTAAATTAAATTAA
CATTTTGTTCGTTTCTATTTGTATGTTCCTCTGTTACCAGCTTCTTTAAA
GATGGGCTCCTTTTTAGTTTTTTTTCAGTCAATTAGTTTTGATTTTTGAT
TTTGGGCAAATTTGGGCTAAAAAGTGCCTAAAAAATTGGTATTTTTTGAC
AGTGGCTGTGTGAAATTTCTTTATTAGTTTTTTGGCATTAGTCTGCTTTT
CGACAATAATTCTTTTTGGGCAATTTGATCCAAAACCTGTTTTTCAAAAG
CATAACATGGCTCCGAATGGGGTTCTAGGCCCCCCCCAACAAATTTAGGT
CGGACCCCCTAAGTTTTAGGTCCCCCCACTTTTCAGTAAGCTTCAGGTCC
CAGTTCAAATCTGTGTACCACCCCCTCTCGCACGCAGATAAAAATAAAAC
GGTAGAATATTTTAAAACAGAACATTAAAACCAAACAAAAAAATATTTTT
ACAATTTCTTAATTATTGTAATAAGCCCCCAGAACTTTGGTGCAGCCCTT
CCGGTCCCCCCACTTTTTTAGCCCCCCCCCTGAGTTTAAAAAATGAGACA
GCTCCCACCCACTTTTAGGCCGATTTTAGATTTACACCCCCCCCAATAAG
TGGGGGGGGGCCGAGCCATGCATAACGCCGCCTCCTTTGTTTTTTTTCTG
ATTTTTGGCTAAAAGATAGGGGGCAAGGTACTCTAAAAGATGACTGAAAT
TATTATTCTTCATCTTGCAATATGGATTCTTGGGAAATTCCCTTTAAAAA
ATGGTCAACTGGGAAATCACGCTACCATATATTCACCCCATGTAACAGAC
TTTATTTCCTGGTATGCATCTCACTCATAATCAGAAAGTGCTAATTTGAA
ATTTTTACCAGTGATGGATAATGATAATTCAAATTAAACTTTAATCGTTT
TGATAAAGTAGATCCATTATCCATTATGCTTTATTGGAAGATCTCAGTTG
ACATAATTGCTTTTCAGATTTTGTCTTGTTTCTCCTAGTGTTTATAAGTA
TTTGTAACTCATTTGTTCTTTAGCCATTTTTTAAGGTCTTTTCCATTTTG
ATTAAAACTTCCATTATGAGGTAGGTATAATCAGCATTTCACTTTACTGA
ATCTTCCATTTGGTTGTCTTATCTTTTTCTCCTAAATTCGATTTTAAGGT
GCATTGATAATCATTTCTTTTTTTGAAGGCTGGAAGAATCGATGCTTTTG
ACACAGCTGCAGAAACCTTCATGAAGAATCCAGTATGAGAACACTAAAGA
TAATATCACCTTTAGCAGAATTGAATTTTTTGAAGATTTCCTTTTCTCCT
TAATTGAATTCTTTACTTTCTTTTCATAAACATTAGGTAAAGTTAATAAT
AGTTTTATTAGGCCAAAGATGAGTGAATTGAGTGATTGCTTCGAAAATTC
AAGCCTTTATTTAACAAGATAAATATTTCTGTGAGAGCTTTCTACTTTCA
ATTTTGAAGGATGAACGGGAAAGTTTGATCGCACAATTGGCCGATACTGC
TGCTGGTGAAAGTGATCCCGAGTAAGAAATTTTGTTGTTGTGGACGTGAC
CTTTCAAATTTTTTAAATATATACCGGGTGTCCCAAAAATAACTTTACAT
GAATTTAAATGCTGATATCTTAAGTTATCTTTTTCAAAGGATATTGAAAT
TGTTAGGGTCTCTTATGAATTCATACTTACACGTTTGTGGGAAATTTCAG
GAACATTTGAGATGTCAATCAAGAAATATAGGTCAAAGATTATCGCAATG
GCTATTACCTGTAGAAAACCGCAGAAGAATGAAAAAATGACGTCAATTTG
CAGTTTTTGGACCTACCCTCCCTCCGGGTACCCCGGTGGAGGTCCTATGA
ATTAACCGTTATCTGTTCGTCTGTTCGTTCGTCCGTCCGTTCGTCTGTTA
CCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAA
AGATGCAAAATGGCAATGCCCAAAATGTGATGGAGCCCGATTTTCGAAAA
AAAATATATTTGGGCAAATTTGGGCCAAAAACTACCTAAAAATAGGGTTT
TTTGGATTTTGTGCATAATCCTGTCATTAGTTTTTTCTGATTTTTTGTAC
AAAGATGGAGGGCAAGATTTTCGGAGTCATTACTTTTTTCTGATTTTTTG
TACAATGATGGAGGGCAAGATTCTCTAAAGAATGACTGAAGTGGTTTTTC
CCGGAAAATTCTTATTCGCCTTAAAAGACGGATTTTCGTATTTTGGGGAA
ATTCCCTTTAACCAAATAAGAAGATAAAGCTTTTCTCAATGTTGACTCAT
AATTTTTTTCTGATTTTTTTCACAATTGTGCAAAATGACAATACCTAAAA
TGTGACGAAGCCCGATTTTCAACAAAACATTTTTTTCCGGCCGAAAATGC
CGGAAATATGCCGGAAAAACTGTTTTTTTGGCATTTTCTCAAGATTTTAT
CATTAGTTTTTTCTGAATTTTTGCTCAAAGATGCGTATTAACAATGCCCA
ACACATGGCCGAGTTCGATTTTTGAGAAATTTTTTTTTCCGGTTGAAAAT
GCCGGAAATCGCCGTGTTTGCAGATTATCATTGGACTTTTTCCTTATGTT
CATTTCTATGTTTTTTACACAAAAGCATTATTGATAACATTGCGCACCAT
CAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAACTTTC
TATTTATTTTTTCCCTACAACCCTTCCCTCTCCCCCCCCATCANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATCAACAATCAATGATGAATTTATTGCGTTATGCATTTT
CGCTAAACGCTATATTTTCTGACTGATTTTTTTTCATTTTTCTCCTCGCA
TTGCTATCTAACTTTCACCATCGGGTAGGTCCATTCAGCATATAGCTTGT
TAAATCTGCATTTCAGAGAAAGATGGCCCTATTTCTCCACTTTTTAACAC
ATATGAAAAAATCCGCTTTGTCTCTTTCTTTGATACTTACTATCATACGT
ATAGCCTAAAATTTTTTTGGTGGCTAGTTATTATACCTACGGTATTAAAG
CGTCGCAAGGAGAAAAACTAGTCTTCAAACAAAATGTGGGTTTTTTGAAA
ATTGAGATAGCTAGAGGAAGCCAAAAAACCTTTTATATCAAATAATTGCT
TCGAAATTAAAAAATGTCAGTGAAGAATGCATTAAAGGTATAAAACCATC
GGCTACTTTTTTGCGTCACTTTCTGTGGGTTTCAAAATCTATCACGTATC
AATGATAGCATAAAAGTTTATAAAATGAGATTGAACGAATGTTTTGCTCT
CAAATTTTGACAAGTGGTATAGAATAAAAATCCTATCGTGTGGTAAATAT
CTCAAACTGATTAAACAACAAAATGTCAGTTTATAAATATTTTTTTGCCA
TTTAAATTTTTTTTCGGACACCCGGTATTTCATCATTGCAGTGGTCAAAT
TTCTCTATGGTCCAATATCGAAAAATATAAATCTTTAACCGTTCATTAAT
TTTTTGACATTTTTTTCAGCTACAAAAAGTCTGGTGAATACTATGTCAAG
GTTATGAAAAAGATTCAAGAGAAGGGAAACGAATATGTCACTAAAGAATT
AGCTCGTCTTCAAAGAATGCTTGGTGAGATTATTTCTTTGTGATTTTCAT
TATAAAATCCTAAAAAAGTTTTCTTGTGAGTTTTTAATCACTCACGCGCC
TTGATCAGTC

Coding sequence (CDS) from alignment at scaffold_284:1493412..1507921-

>TCONS_00056988 ID=TCONS_00056988|Name=TCONS_00056988|organism=Clytia hemisphaerica|type=CDS|length=5184bp|location=Sequence derived from alignment at scaffold_284:1493412..1507921- (Clytia hemisphaerica)
CTACAAAAAGTCTGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAAG
AGAAGGGAAACGAATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATG
CTTGGTGAGATTATTTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACA
ATTGGCCGATACTGCTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGA
TGCTTTTGACACAGCTGCAGAAACCTTCATGAAGAATCCATACTCTTCTG
GACGATCTGAGCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACC
AATCGTGTGTCAGGAGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTT
TTCCCACCATCAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGT
ATTGTTGCGAAAGTTGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGT
GTGGTCACTGTAAAAATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACA
TTCAAGAATGAACCAAAGATGAAGCTTTTGATATTGATATCGATCATTAG
TTTTGTGGCTGGAGAAAGCTTGGTCTTGACAAAAGACAATTTTGACCAAC
ATGTAATGGACCCATCTAAAAATGTTTTGGTTGAATTTTATGCTCCATCT
ACAAAAAGTCTGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAAGAG
AAGGGAAACGAATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATGCT
TGGTGAGATTATTTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACAAT
TGGCCGATACTGCTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGATG
CTTTTGACACAGCTGCAGAAACCTTCATGAAGAATCCATACTCTTCTGGA
CGATCTGAGCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAA
TCGTGTGTCAGGAGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTTTT
CCCACCATCAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGTAT
TGTTGCGAAAGTTGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGTGT
GGTCACTGTAAAAATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACATT
CAAGAATGAACCAAAGATGAAGCTTTTGATATTGATATCGATCATTAGTT
TTGTGGCTGGAGAAAGCTTGGTCTTGACAAAAGACAATTTTGACCAACAT
GTAATGGACCCATCTAAAAATGTTTTGGTTGAATTTTATGCTCCATCTAC
AAAAAGTCTGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAAGAGAA
GGGAAACGAATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATGCTTG
GTGAGATTATTTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACAATTG
GCCGATACTGCTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGATGCT
TTTGACACAGCTGCAGAAACCTTCATGAAGAATCCATACTCTTCTGGACG
ATCTGAGCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAATC
GTGTGTCAGGAGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTTTTCC
CACCATCAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGTATTG
TTGCGAAAGTTGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGTGTGG
TCACTGTAAAAATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACATTCA
AGAATGAACCAAAGATGAAGCTTTTGATATTGATATCGATCATTAGTTTT
GTGGCTGGAGAAAGCTTGGTCTTGACAAAAGACAATTTTGACCAACATGT
AATGGACCCATCTAAAAATGTTTTGGTTGAATTTTATGCTCCATCTACAA
AAAGTCTGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAAGAGAAGG
GAAACGAATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATGCTTGGT
GAGATTATTTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACAATTGGC
CGATACTGCTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGATGCTTT
TGACACAGCTGCAGAAACCTTCATGAAGAATCCATACTCTTCTGGACGAT
CTGAGCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAATCGT
GTGTCAGGAGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTTTTCCCA
CCATCAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGTATTGTT
GCGAAAGTTGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGTGTGGTC
ACTGTAAAAATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACATTCAAG
AATGAACCAAAGATGAAGCTTTTGATATTGATATCGATCATTAGTTTTGT
GGCTGGAGAAAGCTTGGTCTTGACAAAAGACAATTTTGACCAACATGTAA
TGGACCCATCTAAAAATGTTTTGGTTGAATTTTATGCTCCATCTACAAAA
AGTCTGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAAGAGAAGGGA
AACGAATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATGCTTGGTGA
GATTATTTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACAATTGGCCG
ATACTGCTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGATGCTTTTG
ACACAGCTGCAGAAACCTTCATGAAGAATCCATACTCTTCTGGACGATCT
GAGCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAATCGTGT
GTCAGGAGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTTTTCCCACC
ATCAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGTATTGTTGC
GAAAGTTGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGTGTGGTCAC
TGTAAAAATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACATTCAAGAA
TGAACCAAAGATGAAGCTTTTGATATTGATATCGATCATTAGTTTTGTGG
CTGGAGAAAGCTTGGTCTTGACAAAAGACAATTTTGACCAACATGTAATG
GACCCATCTAAAAATGTTTTGGTTGAATTTTATGCTCCATCTACAAAAAG
TCTGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAAGAGAAGGGAAA
CGAATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATGCTTGGTGAGA
TTATTTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACAATTGGCCGAT
ACTGCTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGATGCTTTTGAC
ACAGCTGCAGAAACCTTCATGAAGAATCCATACTCTTCTGGACGATCTGA
GCAGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAATCGTGTGT
CAGGAGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTTTTCCCACCAT
CAAGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGTATTGTTGCGA
AAGTTGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGTGTGGTCACTG
TAAAAATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACATTCAAGAATG
AACCAAAGATGAAGCTTTTGATATTGATATCGATCATTAGTTTTGTGGCT
GGAGAAAGCTTGGTCTTGACAAAAGACAATTTTGACCAACATGTAATGGA
CCCATCTAAAAATGTTTTGGTTGAATTTTATGCTCCATCTACAAAAAGTC
TGGTGAATACTATGTCAAGGTTATGAAAAAGATTCAAGAGAAGGGAAACG
AATATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATGCTTGGTGAGATT
ATTTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACAATTGGCCGATAC
TGCTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGATGCTTTTGACAC
AGCTGCAGAAACCTTCATGAAGAATCCATACTCTTCTGGACGATCTGAGC
AGAATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAATCGTGTGTCA
GGAGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTTTTCCCACCATCA
AGTTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGTATTGTTGCGAAA
GTTGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGTGTGGTCACTGTA
AAAATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACATTCAAGAATGAA
CCAAAGATGAAGCTTTTGATATTGATATCGATCATTAGTTTTGTGGCTGG
AGAAAGCTTGGTCTTGACAAAAGACAATTTTGACCAACATGTAATGGACC
CATCTAAAAATGTTTTGGTTGAATTTTATGCTCCATCTACAAAAAGTCTG
GTGAATACTATGTCAAGGTTATGAAAAAGATTCAAGAGAAGGGAAACGAA
TATGTCACTAAAGAATTAGCTCGTCTTCAAAGAATGCTTGGTGAGATTAT
TTCTTTGTGAGATGAACGGGAAAGTTTGATCGCACAATTGGCCGATACTG
CTGCTGGTGAAAGTGATCCCGAGCTGGAAGAATCGATGCTTTTGACACAG
CTGCAGAAACCTTCATGAAGAATCCATACTCTTCTGGACGATCTGAGCAG
AATTTCATTGACTTTTTGAATGAGAAATGTGGCACCAATCGTGTGTCAGG
AGGTGGTATTGATGATAAGATTTAGTGTCAGTGGTTTTCCCACCATCAAG
TTTTTCTCGAAGACCAATAAAGATGGAGAGGAGTGTATTGTTGCGAAAGT
TGATGCAGATTCTGAAAAAGAAATTGGCTCACGGGTGTGGTCACTGTAAA
AATCTTGCTCCAGTATATGAGAAAGTAGCTGAAACATTCAAGAATGAACC
AAAGATGAAGCTTTTGATATTGATATCGATCATTAGTTTTGTGGCTGGAG
AAAGCTTGGTCTTGACAAAAGACAATTTTGACCAACATGTAATGGACCCA
TCTAAAAATGTTTTGGTTGAATTTTATGCTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035885XLOC_035885Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056988-exon-scaffold_284-1575043694:1507565..1507921TCONS_00056988-exon-scaffold_284-1575043694:1507565..1507921Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1575043694:1500348..1500418TCONS_00056988-exon-scaffold_284-1575043694:1500348..1500418Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1575043694:1498000..1498049TCONS_00056988-exon-scaffold_284-1575043694:1498000..1498049Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1575043694:1497776..1497839TCONS_00056988-exon-scaffold_284-1575043694:1497776..1497839Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1575043694:1497449..1497541TCONS_00056988-exon-scaffold_284-1575043694:1497449..1497541Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1575043694:1495940..1495993TCONS_00056988-exon-scaffold_284-1575043694:1495940..1495993Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1575043694:1495651..1495712TCONS_00056988-exon-scaffold_284-1575043694:1495651..1495712Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1575043694:1493412..1493602TCONS_00056988-exon-scaffold_284-1575043694:1493412..1493602Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1507565..1507921TCONS_00056988-exon-scaffold_284-1510915933:1507565..1507921Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1500348..1500418TCONS_00056988-exon-scaffold_284-1510915933:1500348..1500418Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1498000..1498049TCONS_00056988-exon-scaffold_284-1510915933:1498000..1498049Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1497776..1497839TCONS_00056988-exon-scaffold_284-1510915933:1497776..1497839Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1497449..1497541TCONS_00056988-exon-scaffold_284-1510915933:1497449..1497541Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1495940..1495993TCONS_00056988-exon-scaffold_284-1510915933:1495940..1495993Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1495651..1495712TCONS_00056988-exon-scaffold_284-1510915933:1495651..1495712Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1510915933:1493412..1493602TCONS_00056988-exon-scaffold_284-1510915933:1493412..1493602Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1507565..1507921TCONS_00056988-exon-scaffold_284-1491911889:1507565..1507921Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1500348..1500418TCONS_00056988-exon-scaffold_284-1491911889:1500348..1500418Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1498000..1498049TCONS_00056988-exon-scaffold_284-1491911889:1498000..1498049Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1497776..1497839TCONS_00056988-exon-scaffold_284-1491911889:1497776..1497839Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1497449..1497541TCONS_00056988-exon-scaffold_284-1491911889:1497449..1497541Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1495940..1495993TCONS_00056988-exon-scaffold_284-1491911889:1495940..1495993Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1495651..1495712TCONS_00056988-exon-scaffold_284-1491911889:1495651..1495712Clytia hemisphaericaexon
TCONS_00056988-exon-scaffold_284-1491911889:1493412..1493602TCONS_00056988-exon-scaffold_284-1491911889:1493412..1493602Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Putative disulfide isomeraseTCONS_00056988-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1493412..1507921 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
635.26	669.32	647.1	663.432	211.087	163.348	264.028	267.977	424.015	336.467	334.919	397.55	237.078	224.579	218.302	242.058	238.825	242.74	106.452	139.499	149.749	147.363	271.261	248.331	160.002	156.526	201.49	146.545	220.095	189.541
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR005788Disulphide_isomerase
IPR011679ERp29_C
IPR017937Thioredoxin_CS
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0016853 isomerase activity
Blast
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BLAST of TCONS_00056988 vs. Swiss-Prot (Human)
Match: PDIA4 (Protein disulfide-isomerase A4 OS=Homo sapiens GN=PDIA4 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 6.222e-25
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 3 
Query:  276 SLVLTKDNFDQHVMDPSKNVLVEFYAPWCGHCKNLAPVYEKVA-ETFKNEPKCIVAKVDADSEKEIGSRFSVSGFPTIKFFSKTNKDGEEYSSGRSEQNFIDFLNEKCG 599
            +LVLTK+NFD+ V D +  +LVEFYAPWCGHCK LAP YEK A E  K  P   +AKVDA +E ++  RF VSG+PT+K F K      +Y+  R +   +D++ E+ G
Sbjct:  179 TLVLTKENFDEVVND-ADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRP--YDYNGPREKYGIVDYMIEQSG 284

HSP 2 Score: 94.7449 bits (234), Expect = 2.624e-21
Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = 3 
Query:  279 LVLTKDNFDQHVMDPSKNVLVEFYAPWCGHCKNLAPVYEKVAETFKN-EPKCIVAKVDADSEKEIGSRFSVSGFPTIKFFSKTNKDGEEYSSGRSEQNFIDFLNE 590
            LVL   NFD  V D    VL+EFYAPWCGHCK  AP YEK+A   K+ +P   VAK+DA S   + SRF VSG+PTIK   K      +Y   R+++  +  + E
Sbjct:   65 LVLNDANFDNFVAD-KDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQ--AVDYEGSRTQEEIVAKVRE 166

HSP 3 Score: 92.0485 bits (227), Expect = 1.809e-20
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 3 
Query:  270 GESLVLTKDNFDQHVMDPSKNVLVEFYAPWCGHCKNLAPVYEKVAETFKNEPKCIVAKVDADSEKEIGSRFSVSGFPTIKF 512
            G   V+    FD  VMDP K+VL+EFYAPWCGHCK L PVY  +A+ +K +   ++AK+DA +      R+ V GFPTI F
Sbjct:  525 GPVKVVVGKTFDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYNSLAKKYKGQKGLVIAKMDATANDVPSDRYKVEGFPTIYF 605
The following BLAST results are available for this feature:
BLAST of TCONS_00056988 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIA46.222e-2549.54Protein disulfide-isomerase A4 OS=Homo sapiens GN=... [more]
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