TCONS_00056951 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056951
Unique NameTCONS_00056951
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2104

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056951 ID=TCONS_00056951|Name=TCONS_00056951|organism=Clytia hemisphaerica|type=transcript|length=2104bp
GCGGTAGAATCGTTTTTACACGTCCATTCTTGTTATAATATTCGAATGAT
TTTGTTTTAGGAGATTTCATTTNATTTACACGTCCATTCTTGTTATATAT
TCGAAGGATTTTGTTTTAGGAGATTTCATTTTTAGTGGGATTCATATATA
CAATACTTGGAGGCCACGGTATCATTTTCTTATTGTTTTAGTGGGTAAAA
GACGATAAATATTCTCATAAACTAAAAAACCATGGCTGCTCCTATACAAC
AAATTTCAAATGGCGCTATACCAATTATGTCTGGTGTTGCAGGAACTCCA
GTTCAACAGCCAGCTGTTGTttaccaacaacaacaaccaatgATTGTCGC
AGGTGCTGCTCCGATGGGTTACGCACCACGAAAGCCCTACATCAGGAATC
CGAATGAGGAACATTGCAAAATCTTTGTCGGAGGTGTTGGTAAATTGACA
AATGATGAATCTCTTAGAGCCTACTTTGGAAAATTCGGAGAAATTGCAGA
TAGTGTTATAATGAAAGATAAACATACAAATGAGCCAAGAGGGTTTGCAT
TCGTCACATTCAAAACACCAGAAGCTGTTTCAGCTGTCATTGAACAAAAT
AATAAAGGTGGACATACTCTTGATGGAAAAATGTTTATTGAAGTACGAAA
GTTCCAGAGAAAATCTGAGtatgACCCAGATAAGGCCAACACAACTCTTA
CTACTGCCAATGGTGCTGCACAACTTAACTTTCAATACAAAGGTCCAATG
AAGTGCTCACCAGAAATGAAAGTTTTTGTTGGTGGAATTGGTATTGGTAC
AACAGAGGATGatgtaaagaaatattttgaacaatttgGAAAGGTCCTTG
CTGTCGATATGCCTGTTCATCATGTGTATAAATGTCCCAAAGGCTTTGCA
TTTGTTGGATTTGAGACATTTGATGTAGTTGCAGCTGTAACAAAAGATCG
ATATCATCAGATAAATGGAAAAACGGTCGAAGTAAAAGGCTCAGATGAGC
AGCAAGCACATTTGAACAAAAAGAAGGCTGAAGGTATGACTATCCGGTAT
GCTTCTGCTGGAAGAGGTAGAGGAATTGGATCAGGAAATATTGGAACAGT
GACAGGATACGGTGCATATGCAAACCTTGGTCAACCATTAATCGTAAACC
CTGCTCAACATAGTGTACAATATACAGtTCCTGCTGCAGCAACTGGTGGA
TATGTGTATGATCCCGCATCTAATACGTATTATCAACTCCCTGGAACTGT
CGTCGCTGGTGGTGCAGTTGCAGGTGCAGTGCAAACGGTAGGAACCTCAG
TCGCAGCTGCCTCCCCATACGCTGGTGCAACCATCGCAGCAGGTCAACAA
GTCTTAACTTCTCCACAAGTTGGTCAGCGAACGTTACAAGCAACTGATAT
GATCCAAGGACTAGCAGCAGGCTCAACAGTTGCCTTGGGCGCAGCGTATC
CAAGCGAAACATCAACCTTTGGGCCAACTCGACATAACGTGATCGGAGCC
AGTGCGCAACAACCGATGGCAGGAAACACAGTCGCCGATCCTCACGTCGT
CTATTCTACAGCAACATCTATTTCTGCTGGCGATGCTGCTTTGTCAGCGG
CTCGTGGTTACCACCCTTATGGAAGATAAGATATTGAacttcaaaactga
aaaaagagaCTTCAATCGTACTTTGATCTGTACGTAAAGAAGAAAGCTTT
GAAAGACTCGATCTTCACTCATGGACAGcgattttgtaaataaaaacttt
tttaatctattgattgattgatgctTTGTCAGTTGGTTCTTCGATACGTG
ATAATCATATTGCTCTTTGGTGACAATTCGGTTTTataaatgaaaagaca
ttttattGGATTTGTCTACGCCATGCACAATGGATGTAGATATTTTACGC
GATAATTTCATTTGAATGAACAATTTTTAACGTGAGAACTTTATGGACAT
GCGCGatatttctctctttttatttgaaagaaaatttattcaatggaatt
acaaaatattttgattgtttatccatttcttatttttttatcgGAATTTT
CTTTACTTACTATTGAGTCCACTTCCACATCAGCTTAGTTTGAGATGTGT
AGGG
Run BLAST on NCBI

transcript from alignment at scaffold_284:879845..888851-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056951 ID=TCONS_00056951|Name=TCONS_00056951|organism=Clytia hemisphaerica|type=transcript|length=9007bp|location=Sequence derived from alignment at scaffold_284:879845..888851- (Clytia hemisphaerica)
GCGGTAGAATCGTTTTTACACGTCCATTCTTGTTATAATATTCGAATGAT
TTTGTTTTAGGAGATTTCATTTNATTTACACGTCCATTCTTGTTATATAT
TCGAAGGATTTTGTTTTAGGAGATTTCATTTTTAGTGGGATTCATATATA
CAATACTTGGAGGCCACGGTATCATTTTCTTATTGTTTTAGTGGGTAAAA
GACGATAAATATTCTCATAAACTAAAAAACCATGGCTGCTCCTATACAAC
AAATTTCAAATGGCGCTATACCAATTATGTCTGGTGTTGCAGGAACTCCA
GTTCAACAGCCAGCTGTTGTTTACCAACAACAACAACCAATGATTGTCGC
AGGTGCTGCTCCGATGGGTTACGCACCACGAAAGCCCTACATCAGGAATC
CGAATGAGGAGCATTGGTAANTTACGCACCACGAAAGCCCTACATCAGGA
ATCCGAATGAGGAACATTGGTAAGGGAGCTTTTGAAAAATTGACTTTTTA
ATTTATCCATTATACAGTTATACTTGAAAAAAAGAGCTCTGGGAAAATAA
CCATTGTGTCTTCAAAAGACCAACTGTATTAGTTCCATAGGGAAAAATTC
ATGGTTGTTGGACTTGCAAATACGTGTGTCAGTGTACCAATCAAAGGAAA
TTCGTTTTTACCAATGTTACTTTTTTCTATATCTAAAGAATTAGTAAACG
TTTTAAAATCTGTAAAAAGCTCTCTACTCCCAAATAGTTCTAGATTACCA
GACAATCTCAATCAAACAGAATCGACGATCGAACCAGTCGAATGCAATCG
AATCTCAATCGAGCGTCAAAATTCTGGGTAATATTCGATAGGTTCGATTG
TTGTTCAACTGGTTCGATTGTCGTTCAACTACATTCGATTGTTTGAGTGA
AACAAGGCATGTCCTAAATATATTTTGCGTGATGCGCACCGCTTCCCGTT
ATTCCTCCTTAACTCTCATATATAGCTCAAAAGAATCGAATCAACAAGAG
GATTTCGAAAAGGGTCAGCTTTTTAACAAAGATTAGTCTCTCTAAGGGTC
AGGTCCTAATCAAACGCAATCGAACATCAATCGAACGCAATCGAATATCA
ATTGAATCTGAAAATTGTGAGATTCAATCGCGTTCGACAATCGAATTTCA
ATCGGTCGATTGCGTTCGATTTGGTTCGACTGGTTCGATCGTCGATTCCA
TTTGATTGAGATCGTCTGGAGATGAAACCCTGCAAAAACCATGTTCAATC
TTATCGTTTCGTTGGTATTGGAAACCAAGGAAATTCGCAAAAAATTTATT
TCTCCCTTTTTTAGCAAAATCTTTGTCGGAGGTGTTGGTAAATTGACAAA
TGATGAATCTCTTAGAGCCTACTTTGGAAAATTCGGAGAAATTGCAGATA
GTGTTATAATGAAAGATAAACATACAAATGAGCCAAGGTAAGTGTCAGCA
TAAACATATAAACAACTGGACATCCATCTCCTTTCTTGTATTTTTGAAGA
TAACACTGCTAGCTTCGTTGCCGCCTCATTAAAATCATAAAACCTAACAA
TAAATTTTGGTATACCTCTTGGGAATACCTTGGTAAAACCTCAAAACTTC
AACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTATCTATATCATAA
CCAAGATAACTGAGGCAAAATCATTGTCAGCTTGTCAAAATTCTGACTAA
TATTTTTAAATTTAGACTCAAAAGTATGGAATAATTTTAGAGAGTATGGG
ATTCAAATTATGATAATCTCATGGTACAGGCTCTCAACTTTGGCGTACTA
TTTTTTTCATGTCATAAAAAAATTATTAGAGTGACAAAAGGGATGCAAAA
GTATACACGCAGTTGATAAAATACTTATGCAATGTCAAGCTCTATCAATC
CTTTTACCTTAGTAATTCCAATAAAATGAAATTGTGACGGAATATTGTAG
AATTTTATATATCAATCAGGGCTGCAAATAAGCATCGGTCATCGGTCAAT
GTCCGACTGAAAAAGCCATTTGACCGACTGAAAATCATTTGTGTCGGTCA
TGATGTCCGAATGAAAAAAAAACATTAATTTGAGTTGAAAACAAATCTTT
CACACCCCTGTCTCTTTGTCTATTATTACTACTCTTTTACTTTCTTTTAG
CTTTCAAGAGTGTTTCTAAAGTTTACTTTGATTTCATGCGTTTTTATTTT
TATCGACTTGCTTTCTTTGTAACTTTCATCAGTGTTTCTAAGTTCACTTT
TTATTGACTTGCTATCTTTGTAAACTTTCAAGAGTGTTTATAAGTTCACT
TTTTATCAACTTGCTTTCTTCGTAACTTTCAAGAGTGTCTCTAAGCTCAC
TTTTATCAACTCGTTATCGTTGTAACTTTCAAGGGTCTTTCTAAGTTCAC
TTATATCGCATTGCTTTCTTCGTAACTTTAGAAGTTCCAAGGTCACTTTT
ACCTACTCTCTTTCTCCATAACTTTCAAGACTGTATGATTTCAGAAAACT
TATAGACTGAATGACCGACAGGATTTAGAGCTTGACCGACAGAATTTCAT
CTCAGTCCCGACATGATGTCTGATTGACTAGAAATATTTATTTGCAGCCC
CGATCAATTTTTTAATACAGTGGGTAACAAAGCTCGCTTCAAAGACACAA
TGGAAGATAGTCGTCCAGTCGTTTATATGTTCAGACAAAAAATTTGAGCC
TTGCTAACAGTATCTTATGAAAAACTTTGTTTTAAAAAACGTTTTAAATT
AAAAAAGCAATGGTGAAATGCTGAGTCAGCAGAAAAGTAAATTGCTGTTT
TTGGAAGGAACTTATGCATTGAGCAATGATCATCTAAAAAAATTACTTTC
CAAAACTCCAAAAAAGAGCAATAATTGCTGTTTTTATCTCATATACCCCA
CTGTATATTTTCAGACTGAAGAGAAAAACCCTTTTCTTTTGTTATTTCAT
GATATCTTTTACCTGTTCATTAATTTCACAGAGGGTTTGCATTCGTCACA
TTCAAAACACCAGAAGCTGTTTCAGCTGTCATTGAACAAAATAATAAAGG
TGGACATACTCTTGATGGAAAAATGGTAGGTTGTAATGTCTGAAAGAAAC
TCTACATTATATAATGACAAGAAAAAAATGACGTTTCTATAAGAGAATCA
TTCTGTGTTTTTTATACATTTTGGCACACCTGCAATATTGCCAATATATT
GAAGTAGTTTTGGTTTCATTTTTAAAACTTAATTTGGTTGCTTCATACAG
AGAAGTAGGATGAAATAGAAAACCAGCTTCCTTGACTACCCCATGCCTTT
GTTTTAGCTTTATTAATAAGGTTAGTTTGATTAGGAAAAGTTGAAGAAAA
GATGGCTTGTCCTAAAAATGGCTGGCCATAAAAGTGGATTTGCGTTTTAC
ATTTGTGCACCTACCTGCTTTTCAATAAGATGTGCGCAATCCCGTGTGAA
GTAGCAAATTTTACACCATTTTATTGCCTAAAAATTCTCGTTGTAATGAT
ATTGATTTGTTTCAATAATATTTGGTCCAGTTTCGGGGAAAGCAATCATT
AGAATTGTTAATGTTAGGATATTGTGAGCAAGAAAATAGGTATCTTGTGG
TCTGAGTGAGGTGTTCCCAAAATATAAGCCCCTAAAGTTTAAGCCTAATT
AGACTCAAACAAAAGACTTCCACCACATCACCTCCCTTAAGGGCAAAGGA
CCTGGTACATGACGAGCCGTGTCTTCAAGAAGCTGTTTTTCTATCTCATT
GCACTTCTCTGCTTCATATCTTTGATATCTGGGTTGAAAGAAAAATTATA
AAAAATTATATTTTGTTTGTATTGAGCCTTTCACTGACACTGCTGAGATG
GATTGAAAATATGTTATTTTGAGTTTGGAACAGGTTGGAAACATTTGTTT
GAGGCTAGGAAGGTCTGGAAGATAAAAGAGTTCTTTTTTCTTTCCTTTAC
ATAGTTTATTGAAGTACGAAAGTTCCAGAGAAAATCTGAGGTGAGATCAA
GTTTCTGACTTCATTATTGTTGTTATTCTTTGAAGGTTGATCCTAAGCCA
GCTGTCCCTCAAGGTCCTGGAGTTCAAAATAAACCCTTGGTAAGTTTTTT
AAGTCAGTCGATCTCTGGATCTTTGATATTAATGCCCTATCTACTTGATT
TTTACTGAATGACACAAGATGAGTCTTAGACTTTTGTTTATTTATTTTTT
GTCTCATTACAGTTTTTGAATATTTTTCATTTTCAGTATGACCCAGATAA
GGCCAACACAACTCTTACTACTGCCAATGGTGCTGCACAACTTAACGTAA
GAATTAAAAATCTTGGTATCAATATTGTTACATTTTGCATGCAAGTCAGT
TTCAAATTATGTCTAAATCAGCAATGCCCTCAATTGAAGTTGATAAATGC
TTTGCTATGACCACTGGTGTTTGATCAATAATTTAAATCAAAACTTTTCT
TTCTTGAACAGTTTCAATACAAAGGTCCAATGAAGTGCTCACCAGAAATG
AAAGTTTTTGTTGGTGGAATTGGTATTGGTACAACAGAGGATGATGTAAA
GAAATATTTTGAACAATTTGGAAAGGTAATTTGAACTTTTTTCTCTTCAA
ATACTCCTTCAAAATTAAAAAAACAAGGAATGTTTTGAAAATAAGACATT
TAAAAATCTTAATTTCTTATCCTTCAGGTCCTTGCTGTCGATATGCCTGT
TCATCATGTGTATAAATGTCCCAAAGGTATGTTTATTATTCAGAATTTCG
GACTTTATGCCCCTCAAATATCCAAGTTTACGAAAATCACCATATTTTTT
GATCCACACAAAAACAATTAACAATGCAAAAAAGTTTAACCCACGCAAAT
AAATTTTTGAACTTCGCAAAAAAAAATTTGACCGTCCATAAAAAAATTCT
ACCCACATGTCCATTCAACCCAAGCACCCACTCAACCCACACCCGTCAAA
TCCATACCAGGGTAGAATAACTGATTTTAGAGAGGGCTAACTAACTGTGA
TTTAAAACTTAATCATTTTCCTTTCCAACAATTTGTTGACTAGGCTATAA
AAAAAAAAAAATTCTATCAATTCATTTTCTGCTACATCTGGTTGTAATCA
TACTTACAAATTCCTTAAAATTTTGTTTTGGTATATATGTTTTTGATAAG
GGATATGGTTATGAAGTATAAGCTTTTCTTGGACGGGTAACTGACCTCAA
CTTGTCCGTGCACAAGATTACTATCATCCCTATTACTATTTTCAGCTTTC
TATCTGCTTGAGCCAATTTTATTTTATATTGATTTATAATTAGTAGAAAC
CTAGTTGCACACCTTTGCATTTAACTCTAGACAAAATATATTGACAGAAC
TCATATATTTTAGATGTTTAAATATTTACAATTAATGAAAAATAGCCACA
GCACAACTTAGCCTGTTTTTTAAGTAACCAAAATATTATATTTGAGATCA
GAATATTAACATTTTGAATAACATTTGACATTACTAGAATTTTTGACCTT
CAAAATCTAAAAATATATACATCATTTTATGATTTTATACTTAAAAGTAT
TTTAACTAAGAACTTAATAGTCCCATATGCCATTAATCAATGTTTTTGAA
TGTATGAATTTACTATGTCTTCTTTTTAGCAAAATATTTCTAATTTATGA
TTACCTAATTAGGCTTTGCATTTGTTGGATTTGAGACATTTGATGTAGTT
GCAGCTGTAACAAAAGATCGATATCATCAGATAAATGGAAAAACGGTGTG
ATATAAAATATTTTAATGTTGTTTTACCAATTATTTTTTCAATTCTTCGT
AATTTATAATCAATATTTTTAAAAAGTTTCAGGTATTTTCACTATTTTGA
CTGACACTGTAACTAATTTTAGTTCAGCTCTTTTCAGAAATTTTACCACT
ATTTTTCTGTTTGTTTCTAGCCTTAGACTTTAATATTGTTTGAATGTTAT
TTTGCAATCATTTGTTCAGTATTTTTGTTTTTCTGAAAAGCTAATTTTTG
CTTATTTTTTAGATTTTAAAATTTGCCTTTTTTCAGTCAGTNTTATATTG
ATTTATAATTAGTAGAAACCTAGTTGCACACCTTTGCATTTAACTCTAGA
CAAAATATATTGACAGAACTCATATATTTTAGATGTTTAAATATTTACAA
TTAATGAAAAATAGCCACAGCACAACTTAGCCTGTTTTTTAAGTAACCAA
AATATTATATTTGAGATCAGAATATTAACATTTTGAATAACATTTGACAT
TACTAGAATTTTTGACCTTCAAAATCTAAAAATATATACATCATTTTATG
ATTTTATACTTAAAAGTATTTTAACTAAGAACTTAATAGTCCCATATGCC
ATTAATCAATGTTTTTGAATGTATGAATTTACTATGTCTTCTTTTTAGCA
AAATATTTCTAATTTATGATTACCTAATTAGGCTTTGCATTTGTTGGATT
TGAGACATTTGATGTAGTTGCAGCTGTAACAAAAGATCGATATCATCAGA
TAAATGGAAAAACGGTGTGATATAAAATATTTTAATGTTGTTTTACCAAT
TATTTTTTCAATTCTTCGTAATTTATAATCAATATTTTTAAAAAGTTTCA
GGTATTTTCACTATTTTGACTGACACTGTAACTAATTTTAGTTCAGCTCT
TTTCAGAAATTTTACCACTATTTTTCTGTTTGTTTCTAGCCTTAGACTTT
AATATTGTTTGAATGTTATTTTGCAATCATTTGTTCAGTATTTTTGTTTT
TCTGAAAAGCTAATTTTTGCTTATTTTCTAGATTTTAAAATTTGCCTTTT
TTCAGTCAGTCATTATTCAGTATTACTGTTCTAAACTGAATTTTGAGATT
GGTTTATTTTGTTGTAGGTCGAAGTAAAAGGCTCAGATGAGCAGCAAGCA
CATTTGAACAAAAAGAAGGCTGAAGGTATGAGTGAGTACCAGAACTTTCT
TATTATTTTAATGATTACCTTTCGAATGCTCAAATACTGATTCTCGTCTA
CGGGAAGGGTTTTTTTCAAATGACCTTCTTGATTTATTTGCGAATTAAAT
ACCTTAAGGAAAGAAATTTTTGTGGAACAAGTTTTTGACAAATCCGCGAA
ATAAGAATATTATCATGATTTAGACAGGTTTAGAAAATAACCTATAGTAT
TAGTGTTTTTGGGGCAGAATAAGCCATATTTAAACAAAAATTTGTCTCAA
CCGCAAAATTAAATTCTGTGAAACTTCTGAATTTTGAGCTGTGAACTGCG
AAATTAAATTCCACAAAAATTTTTTTCCGCAGAGATTTCTTCCCTTAAGG
TAACAACAAACAAGGAATTGAAATGAATTTATCTTAAATATTTTGCTTTT
TTTTCAGCTATCCGGTATGCTTCTGCTGGAAGAGGTAGAGGAATTGGATC
AGGAAATATTGGAACAGTGACAGGATACGGTGCATATGCAAACCTTGGTC
AACCATTAATCGTAAACCCTGCTCAACATAGTGTACAATATACAGGTAAG
AAGTTAGTTAGCAAAACATATTTGCTATAAGCCTTAAATATCAACACTGA
TCACACCTTGGTAAAAGGATTAATGAATTATAGACAAAAGTATGTTAATT
AGGGTTTAAACTGGTGTAAATAATGTTTTTTTTTTTTTTCAACCTGATAA
AAAAAGAAATAAAATAATTGATTCGACAAATCCTTTTGAACCTTCAGTTG
CTTTTTCATTACTATTTTGTTTTTTTCTCAGTTCCTGCTGCAGCAACTGG
TGGATATGTGTATGATCCCGCATCTAATACGTATTATCAACTCCCTGGAA
CTGTCGTCGCTGGTAAGACTATCACTCAAATTTACCAGATGAATGCACGT
CAAAATATTTCAAAACCTTATTTTATAAAAAATTACTCAATAGTAGGTTT
TAAAATAGATCACTCTTTGGTATCTGGTCAAAAATATAAGCTCGATAAAA
TCGCGAAATTTAATCCCCGTTAAAGTTTATCCCATTAAAGTAGTAACAAA
ATATTTCTGTAATTAACAGGTGGTGCAGTTGCAGGTGCAGTGCAAACGGT
AGGAACCTCAGTCGCAGCTGCCTCCCCATACGCTGGTGCAACCATCGCAG
CAGGTCAACAAGTCTTAACTTCTCCACAAGTTGGTCAGCGAACGTTACAA
GCAACTGATATGATCCAAGGACTAGCAGCAGGCTCAACAGTTGGTAAGTG
AGTAATCTACGTAAGTCATCTCTTGAGAATAACTTTTAAAAGTTTGAGTG
TCCAAAAGTTCTAAGTAAACATCATAGATCAATAACAGTACTTTGTATGT
ATATGATATTATCAATCATATTATCATATTTTTAGCCTTGGGCGCAGCGT
ATCCAAGCGAAACATCAACCTTTGGGCCAACTCGACATAACGTGATCGGA
GCCAGTGCGCAACAACCGATGGCAGGAAACACAGTCGCCGATCCTCACGT
CGTCTATTCTACAGCAACATCTATTTCTGCTGGCGATGCTGCTTTGTCAG
CGGCTCGTGGTTACCACCCTTATGGAAGATAAGATATTGAACTTCAAAAC
TGAAAAAAGAGACTTCAATCGTACTTTGATCTGTACGTAAAGAAGAAAGC
TTTGAAAGACTCGATCTTCACTCATGGACAGCGATTTTGTAAATAAAAAC
TTTTTTAATCTATTGATTGATTGATGCTTTGTCAGTTGGTTCTTCGATAC
GTGATAATCATATTGCTCTTTGGTGACAATTCGGTTTTATAAATGAAAAG
ACATTTTATTGGATTTGTCTACGCCATGCACAATGGATGTAGATATTTTA
CGCGATAATTTCATTTGAATGAACAATTTTTAACGTGAGAACTTTATGGA
CATGCGCGATATTTCTCTCTTTTTATTTGAAAGAAAATTTATTCAATGGA
ATTACAAAATATTTTGATTGTTTATCCATTTCTTATTTTTTTATCGGAAT
TTTCTTTACTTACTATTGAGTCCACTTCCACATCAGCTTAGTTTGAGATG
TGTAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035868XLOC_035868Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056951-exon-scaffold_284-1575043694:888462..888851TCONS_00056951-exon-scaffold_284-1575043694:888462..888851Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:888383..888408TCONS_00056951-exon-scaffold_284-1575043694:888383..888408Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:887415..887537TCONS_00056951-exon-scaffold_284-1575043694:887415..887537Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:885777..885870TCONS_00056951-exon-scaffold_284-1575043694:885777..885870Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:884862..884897TCONS_00056951-exon-scaffold_284-1575043694:884862..884897Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:884556..884615TCONS_00056951-exon-scaffold_284-1575043694:884556..884615Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:884277..884390TCONS_00056951-exon-scaffold_284-1575043694:884277..884390Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:884126..884174TCONS_00056951-exon-scaffold_284-1575043694:884126..884174Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:883107..883189TCONS_00056951-exon-scaffold_284-1575043694:883107..883189Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:881921..881984TCONS_00056951-exon-scaffold_284-1575043694:881921..881984Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:881357..881494TCONS_00056951-exon-scaffold_284-1575043694:881357..881494Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:881040..881120TCONS_00056951-exon-scaffold_284-1575043694:881040..881120Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:880659..880832TCONS_00056951-exon-scaffold_284-1575043694:880659..880832Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1575043694:879845..880516TCONS_00056951-exon-scaffold_284-1575043694:879845..880516Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:888462..888851TCONS_00056951-exon-scaffold_284-1510915933:888462..888851Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:888383..888408TCONS_00056951-exon-scaffold_284-1510915933:888383..888408Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:887415..887537TCONS_00056951-exon-scaffold_284-1510915933:887415..887537Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:885777..885870TCONS_00056951-exon-scaffold_284-1510915933:885777..885870Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:884862..884897TCONS_00056951-exon-scaffold_284-1510915933:884862..884897Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:884556..884615TCONS_00056951-exon-scaffold_284-1510915933:884556..884615Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:884277..884390TCONS_00056951-exon-scaffold_284-1510915933:884277..884390Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:884126..884174TCONS_00056951-exon-scaffold_284-1510915933:884126..884174Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:883107..883189TCONS_00056951-exon-scaffold_284-1510915933:883107..883189Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:881921..881984TCONS_00056951-exon-scaffold_284-1510915933:881921..881984Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:881357..881494TCONS_00056951-exon-scaffold_284-1510915933:881357..881494Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:881040..881120TCONS_00056951-exon-scaffold_284-1510915933:881040..881120Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:880659..880832TCONS_00056951-exon-scaffold_284-1510915933:880659..880832Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1510915933:879845..880516TCONS_00056951-exon-scaffold_284-1510915933:879845..880516Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:888462..888851TCONS_00056951-exon-scaffold_284-1491911889:888462..888851Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:888383..888408TCONS_00056951-exon-scaffold_284-1491911889:888383..888408Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:887415..887537TCONS_00056951-exon-scaffold_284-1491911889:887415..887537Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:885777..885870TCONS_00056951-exon-scaffold_284-1491911889:885777..885870Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:884862..884897TCONS_00056951-exon-scaffold_284-1491911889:884862..884897Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:884556..884615TCONS_00056951-exon-scaffold_284-1491911889:884556..884615Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:884277..884390TCONS_00056951-exon-scaffold_284-1491911889:884277..884390Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:884126..884174TCONS_00056951-exon-scaffold_284-1491911889:884126..884174Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:883107..883189TCONS_00056951-exon-scaffold_284-1491911889:883107..883189Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:881921..881984TCONS_00056951-exon-scaffold_284-1491911889:881921..881984Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:881357..881494TCONS_00056951-exon-scaffold_284-1491911889:881357..881494Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:881040..881120TCONS_00056951-exon-scaffold_284-1491911889:881040..881120Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:880659..880832TCONS_00056951-exon-scaffold_284-1491911889:880659..880832Clytia hemisphaericaexon
TCONS_00056951-exon-scaffold_284-1491911889:879845..880516TCONS_00056951-exon-scaffold_284-1491911889:879845..880516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:879845..888851 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.000114978	1.4883e-07	2.72864e-09	0.000446435	1.56382e-08	0.00317705	0.0148688	0	0	0	0	0	0	0	0	0	0	0	0	6.9645e-08	0	4.91198e-08	0	4.56238e-08	0.0115712	6.88687e-10	2.75883e-05	1.1464e-08	3.76929e-06
Blast
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BLAST of TCONS_00056951 vs. Swiss-Prot (Human)
Match: MSI1H (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.549e-32
Identity = 74/220 (33.64%), Postives = 108/220 (49.09%), Query Frame = 1 
Query:  382 KPYIRNPNEEH--CKIFVGGVGKLTNDESLRAYFGKFGEIADSVIMKDKHTNEPRGFAFVTFKTPEAVSAVIEQNNKGGHTLDGKMFIEVRKFQRKSEYDPDKXXXXXXXXXXXXXXXFQYKGPMKCSPEMKVFVGGIGIGTTEDDVKKYFEQFGKVLAVDMPVHHVYKCPKGFAFVGFETFDVVAAVTKDRYHQINGKTVEVKGSDEQQAHLNKKKAEG 1035
            +P + +P+  H  CK+F+GG+   T  E LR YFG+FGE+ + ++M+D  T   RGF FVTF     V  V+ Q+    H LD K       F R+++                         P   +   K+FVGG+ + TT +DVK+YFEQFGKV    +         +GF FV FE+ D+V  V +  +H+IN K VE K +  ++       A G
Sbjct:    7 QPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR---HELDSKTIDPKVAFPRRAQ-------------------------PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARG 198
The following BLAST results are available for this feature:
BLAST of TCONS_00056951 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSI1H9.549e-3233.64RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
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