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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056902 ID=TCONS_00056902|Name=TCONS_00056902|organism=Clytia hemisphaerica|type=transcript|length=551bp
GCTCCATTTGATGAACACATAAATTTAAAGGTCTAAACACCATTTTACAA
TCACGACTTTAATCAAGTTCAAGATTACTTctcaagaagaaaattaattg
tTTTTCAGCTGCCGATCTAAGGAAAAGATGAAGCTCGCAATCGTTTTGAT
GTTGACATTCTGTTTGTTCTTACAAACTCAAGCCAGGAAAATTGATGACG
AGAAATATTACGAGAAAATGGAAAACGACCCGGCTCGCTGTGTTTACAAG
GGAGGTTTTTGCAATCCATTCGTTAGATGCTGTGCACAAAAACATCAAAT
GCTTTTTTGCATTGGTTTCAGATGTCGAACAATTGgcaaaaaatttgtat
tttaaaccaagtattttaattttctttaacgctagcattttcattttcat
ggaaGAGAAAATCGTATTATTGTATCTTATGAGAAAATATTTCCATCAGg
tacatgattttttataagagctaATAAATGTTGGTTTGGATTCcttattt
tcagtgattttGAGGCGTACAGTTTAAGTGTTTAAATTGTTAACTTATTC
G Run BLAST on NCBI transcript from alignment at scaffold_284:1281481..1282738+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056902 ID=TCONS_00056902|Name=TCONS_00056902|organism=Clytia hemisphaerica|type=transcript|length=1258bp|location=Sequence derived from alignment at scaffold_284:1281481..1282738+ (Clytia hemisphaerica)
GCTCCATTTGATGAACACATAAATTTAAAGGTCTAAACACCATTTTACAA
TCACGACTTTAATCAAGTTCAAGATTACTTctcaagaagaaaattaattg
tTTTTCAGCTGCCGATCTAAGGtaaatttctaatatttttttctaatttt
gatatgtGATTGATGTATGATTTACTAATGCTAATTAAGTCTTTGCACAT
TAGACGGCTTCAACGTTGtgatccggggggggggggactagggcaagatg
ggttacggggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccc
cccccccccccccggggttgtCTACAGACGTCCgtagaattaagaaaatt
tatacatctacttattttgtagattttctagTGACACTGGCctgacaaat
ttcataaagaactaCAAACTTCGCCAAGAAAGTTTATGTTTTCgataaat
atattttctttatacttgcgaaattaaatgtcgtgaatttcgcaaTTTTT
TAACCCTCGTCTCATCCCGCAAAGATTTTTACGACTTAATCATATTAAGG
TGGACTATATTATATGTTTACTAAGGTAAATTATTCACCGATGACGAATT
CTACGATGATGGTTCacccaaaaaaatacaaaagatgAGTGTATTGTTAA
agctaatttttttctcttttcttcacAGGAAAAGATGAAGCTCGCAATCG
TTTTGATGTTGACATTCTGTTTGTTCTTACAAACTCAAGCCAGGAAAATT
GATGACGAGAAATATTACGAGAAAATGGAAAACGACCCGGCTCGCTGTGT
TTACAAGGGAGGTTTTTGCAATCCATTCGTTAGATGCTGTGCACAAAAAC
ATCAAATGCTTTTTTGCATTGGTTTCAGATGTCGAACAATTGgcaaaaaa
tttgtattttaaaccaagtattttaattttctttaacgctagcattttca
ttttcatggaaGAGAAAATCGTATTATTGTATCTTATGAGAAAATATTTC
CATCAGgtacatgattttttataagagctaATAAATGTTGGTTTGGATTC
cttattttcagtgattttGAGGCGTACAGTTTAAGTGTTTAAATTGTTAA
CTTATTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056902-exon-scaffold_284-1491911889:1281481..1281601 | TCONS_00056902-exon-scaffold_284-1491911889:1281481..1281601 | Clytia hemisphaerica | exon |
| TCONS_00056902-exon-scaffold_284-1510915933:1281481..1281601 | TCONS_00056902-exon-scaffold_284-1510915933:1281481..1281601 | Clytia hemisphaerica | exon |
| TCONS_00056902-exon-scaffold_284-1575043694:1281481..1281601 | TCONS_00056902-exon-scaffold_284-1575043694:1281481..1281601 | Clytia hemisphaerica | exon |
| TCONS_00056902-exon-scaffold_284-1491911889:1282309..1282738 | TCONS_00056902-exon-scaffold_284-1491911889:1282309..1282738 | Clytia hemisphaerica | exon |
| TCONS_00056902-exon-scaffold_284-1510915933:1282309..1282738 | TCONS_00056902-exon-scaffold_284-1510915933:1282309..1282738 | Clytia hemisphaerica | exon |
| TCONS_00056902-exon-scaffold_284-1575043694:1282309..1282738 | TCONS_00056902-exon-scaffold_284-1575043694:1282309..1282738 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:1281481..1282738 + |
Blast
The following BLAST results are available for this feature:
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