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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056826 ID=TCONS_00056826|Name=TCONS_00056826|organism=Clytia hemisphaerica|type=transcript|length=1329bp
gaaataatatttttgagTGTTAAAGTAATTGGAtagtttgaatttaaaaa
atataatatatacatAAAAAATCCATGAAAAAGTAACAatgaaagtttgg
tttttcggATTGCTTTTTGTTGCAATTGCTTTAAATTGTGTCATATGCGA
GGGAGATGATTGTGATAATGATTGTGATGATGATTGCTCTGATGATTGCT
CACCAGGGCCATGCGAGGGAGATGATTGCTGTGATAATTTGTGTGCTGAC
GATTGCTCACCAGGGCCACAAGGGCCAGAAGGGCCACCAGGGGCAGATGG
ACCTACAGGGCCACCGGGACCTGAAGGGCCACCGGGACCTGCAGGGGCAG
ATGGACCTCCAGGACCTCAAGGAGATACAGGGCCTATGGGACCTCCAGGA
CCTCAAGGAGATATAGGACCACAAGGTGAGACAGGGCCTGCAGGACCCCC
TGGTCCAATACAACTATGTGGCTGTGGAATCAAAAGTCATTATTTTGTCC
CTGAAGGTGCTTCTCCAATGCTTTCTTGGGAGGCTGCTCAGGACCTATGT
GAAGCAAATATGGCAAATTTGGTTGGAATTcacaatttaaaagaaaatct
atatattactgcaaaatatttttctttgaaCACCATTTGGATTGGACTCC
TAAATGACCTCGCTAATTCGAAATTCAAGTGGATTGATAATGATATTTCT
GGTTACCGAAACTGGTGTACTGGCACACCACCTGCAGCTGGTGCTACAGG
ATGCGTCTTGGTAGATTTTGAGAATGTCGATTGGGATGCACCTGGTTGTT
TTAAGCTGGTCCCTTGTACAGAAGGTCATAATTATATTTGTGAATCCAAA
GTAAATTATGGGGGTAATGGAATAAAAACACTGGTGCAAGCCTTAACAAC
TAATATTCGACAAAGAAGATGTCAATTCTGCAAATAATTTTATTACCATt
attcacattggattgacacggatgtggagcaagattggtcaaaaagagga
aaagaaaagaattttttgtttatatcagcataatataacaataggtacGA
AATATGTGTCTGACATGAAACTGGAAcacttaaaaagaaaaactttgaat
aaaataaaatttgataataGAATATGTATCGACGTTCTTTTGCAACTAAC
ACACCATATATATCAAGATGTAATAGTGACTAAAGTAtctctcaaaataa
tttgcagctgagacaaaaatggctgtaacttttgatagaatttgaatcaa
gtaaatatttggaaaaagaaaagaaaaatgaaaatgaaaaatgaagaaga
gaaaaatCAAGTTCTTTTAGAAATGTGAT Run BLAST on NCBI transcript from alignment at scaffold_283:83390..85271- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056826 ID=TCONS_00056826|Name=TCONS_00056826|organism=Clytia hemisphaerica|type=transcript|length=1882bp|location=Sequence derived from alignment at scaffold_283:83390..85271- (Clytia hemisphaerica)
GAAATAATATTTTTGAGTGTTAAAGTAATTGGATAGTTTGAATTTAAAAA
ATATAATATATACATAAAAAATCCATGAAAAAGTAACAATGAAAGTTTGG
TTTTTCGGATTGCTTTTTGTTGCAATTGCTTTAAATTGTGTCATATGCGA
GGGAGATGATTGTGATAATGATTGTGATGATGATTGCTCTGATGATTGCT
CACCAGGGCCATGCGAGGGAGATGATTGCTGTGATAATTTGTGTGCTGAC
GATTGCTCACCAGGGCCACAAGGGCCAGAAGGGCCACCAGGGGCAGATGG
ACCTACAGGGCCACCGGGACCTGAAGGGCCACCGGGACCTGCAGGGGCAG
ATGGACCTCCAGGACCTCAAGGAGATACAGGGCCTATGGGACCTCCAGGA
CCTCAAGGAGATATAGGACCACAAGGTGAGACAGGGCCTGCAGGACCCCC
TGGTCCAATACAACTATGTGGCTGTGGAATCAAAAGTCATTATTTTGTCC
CTGAAGGTGCTTCTCCAATGCTTTCTTGGGAGGCTGCTCAGGACCTATGT
GAAGCAAATATGGCAAATTTGGTTGGAATTCACAATTTAAAAGAAAATCT
ATATATTACTGCAAAATATTTTTCTTTGAAGTAAGTGGACTTTTTTATCT
AAGCCAGCAGTTTAGTATAAATAAATGTGGTTACACATTATAAAATTCCG
AAGGTGACAAAGTGGTTTCTTATCTTATCTGTTGAATATTGCAAATTTTT
AATTATATATCCTATTCAAAGTATACATTTTTGAAATCGCCAAGATTTAA
GCAGTCCAAAGATGTAAAAGTAACCTATCTATAAAAAGTTGGATTTTTTC
TTCTTCATTTTTCTTCATGTTCTTTTCAAATTTCACGGAAAAAACTAACA
GTAAATTAATAAGCTCCTTCCTACCTTCCCAAGGATACCAAACTTTTTAA
GATTGAAGCATTGGTTGAGAAATAACAAGCAAAGCAAAATTAAGTGCACA
CTTATCGTGAACAGACTTCAGAAAAATTAATTAATTTGGAATTGGGAATT
GATCTGGTCAGGGAAACTCTCAAATTGTCACTTTCTAGTCAGTCAAAAAA
GTATCAGGGATTTACCAAACCTTTTGCAATTGTTAGAAAAGATGATAGAG
ATAAGAATAACGATGATATATTTCTCATTTTAGCACCATTTGGATTGGAC
TCCTAAATGACCTCGCTAATTCGAAATTCAAGTGGATTGATAATGATATT
TCTGGTTACCGAAACTGGTGTACTGGCACACCACCTGCAGCTGGTGCTAC
AGGATGCGTCTTGGTAGATTTTGAGAATGTCGATTGGGATGCACCTGGTT
GTTTTAAGCTGGTCCCTTGTACAGAAGGTCATAATTATATTTGTGAATCC
AAAGTAAATTATGGGGGTAATGGAATAAAAACACTGGTGCAAGCCTTAAC
AACTAATATTCGACAAAGAAGATGTCAATTCTGCAAATAATTTTATTACC
ATTATTCACATTGGATTGACACGGATGTGGAGCAAGATTGGTCAAAAAGA
GGAAAAGAAAAGAATTTTTTGTTTATATCAGCATAATATAACAATAGGTA
CGAAATATGTGTCTGACATGAAACTGGAACACTTAAAAAGAAAAACTTTG
AATAAAATAAAATTTGATAATAGAATATGTATCGACGTTCTTTTGCAACT
AACACACCATATATATCAAGATGTAATAGTGACTAAAGTATCTCTCAAAA
TAATTTGCAGCTGAGACAAAAATGGCTGTAACTTTTGATAGAATTTGAAT
CAAGTAAATATTTGGAAAAAGAAAAGAAAAATGAAAATGAAAAATGAAGA
AGAGAAAAATCAAGTTCTTTTAGAAATGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056826-exon-scaffold_283-1575043694:84642..85271 | TCONS_00056826-exon-scaffold_283-1575043694:84642..85271 | Clytia hemisphaerica | exon |
| TCONS_00056826-exon-scaffold_283-1575043694:83390..84088 | TCONS_00056826-exon-scaffold_283-1575043694:83390..84088 | Clytia hemisphaerica | exon |
| TCONS_00056826-exon-scaffold_283-1510915933:84642..85271 | TCONS_00056826-exon-scaffold_283-1510915933:84642..85271 | Clytia hemisphaerica | exon |
| TCONS_00056826-exon-scaffold_283-1510915933:83390..84088 | TCONS_00056826-exon-scaffold_283-1510915933:83390..84088 | Clytia hemisphaerica | exon |
| TCONS_00056826-exon-scaffold_283-1491911889:84642..85271 | TCONS_00056826-exon-scaffold_283-1491911889:84642..85271 | Clytia hemisphaerica | exon |
| TCONS_00056826-exon-scaffold_283-1491911889:83390..84088 | TCONS_00056826-exon-scaffold_283-1491911889:83390..84088 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_283 | supercontig | scaffold_283:83390..85271 - |
Blast
The following BLAST results are available for this feature:
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