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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056779 ID=TCONS_00056779|Name=TCONS_00056779|organism=Clytia hemisphaerica|type=transcript|length=576bp
ggACAAAGTATAATagctaaataaaaaataaaatcacaatTATACTGAAA
TATGATGTTGGAGGGGAACACTTACACCAGAACCATTACACCAACAGGAG
AAGAAGGATGCTTCAATTGAATTACAGTGATTCTGAATCATCTGGCGACA
CCAGTAGTGGTGACGAGAATAGCTTTGGCAATACGGaCAAACTTAAGCCA
AAGCCTGGCAATAATTCACTCGAAGGTGAAGAGAATATTGATGGTGAATC
TATCTCTGGTAAACCATCAGTTGTAAATGACCAAGAACCAGCTGAGAATG
AAGTCATCACCAACGATGTCGGTGTGGATACAAAACATACTGTTCCATCC
TCTTTCTCGGTATGAATGttgtttcatttcttttttgtgaatttcggatt
cctgattatttttttttttttttttcattttctccttAACGGGATGAGAT
GATTTTACACACTTTACAGCCGAAATTCTTCAGTTAAAGCTGTAATGTAT
TCACATTTAAAATAGAGCAATAAAAAATGTACAATTTTGTATCAGTTTGT
CATCTGTGGCCATTTCTACACGATGc Run BLAST on NCBI transcript from alignment at scaffold_282:244972..246210- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056779 ID=TCONS_00056779|Name=TCONS_00056779|organism=Clytia hemisphaerica|type=transcript|length=1239bp|location=Sequence derived from alignment at scaffold_282:244972..246210- (Clytia hemisphaerica)
GGACAAAGTATAATAGCTAAATAAAAAATAAAATCACAATTATACTGAAA
TATGATGTTGGAGGGGAACACTTACACCAGAACCATTACACCAACAGGAG
AAGAAGGATGCTTCAATTGAATTACAGTGATTCTGAATCATCTGGCGACA
CCAGTAGTGGTGACGAGAATAGCTTTGGCAATACGGGTAATAATACAAAT
AATACACCTATCAACCTTTAGCAGCGCAAGGAGACTGGTAACGAAAATAC
AGGGGAAGTTCTTCTCAAAGGTGGTATCGAAAACACAAGTGTAGGAGTGC
TCTTATGAAAAAATGTGAGATATCCTTGCATTGAAGCAATAAAGTAACGT
CAATTATAGTTAAGCTATTTTAAGGCTAAAAATAGTTTGCAGAGCCTAAA
TATATTGTGCGCCGTGAACAAATCTTCCTTGTGAATTCATTTCCAGTCCC
CTAGAAATCCAACCGCGCTGCTAAGGGTTGATATGTGTATAGTGAGAAGG
TAATGATTATTGATTATTAAAACTTTATCTATCATTTCTCTGTGTATTTA
GTCAAATACTAGTATGACGTGACGTAACAAAATGGCCATTACATTATATA
GCCGATTGGGTTGCCTTAGTACTTGGTGTCCTGTGATCCTAGGTTGCTAC
ACTGGATATTCAGTCCAAATTCAGTCTGACCGTGAACCTAACTTTGGAAA
GAATAAAGTAATAGCCCTGTGATCGATTGATTGATATCTTGAAATTGTCT
CGGTGAAAAGTAAGATGAGTTAGTTTGATTATGATTTTAAATAAGTAAGA
TTTCATTTTGTGAAACGTGCGCCTTAAAAGTATTTCTTTTTGTTTACAGA
CAAACTTAAGCCAAAGCCTGGCAATAATTCACTCGAAGGTGAAGAGAATA
TTGATGGTGAATCTATCTCTGGTAAACCATCAGTTGTAAATGACCAAGAA
CCAGCTGAGAATGAAGTCATCACCAACGATGTCGGTGTGGATACAAAACA
TACTGTTCCATCCTCTTTCTCGGTATGAATGTTGTTTCATTTCTTTTTTG
TGAATTTCGGATTCCTGATTATTTTTTTTTTTTTTTTTCATTTTCTCCTT
AACGGGATGAGATGATTTTACACACTTTACAGCCGAAATTCTTCAGTTAA
AGCTGTAATGTATTCACATTTAAAATAGAGCAATAAAAAATGTACAATTT
TGTATCAGTTTGTCATCTGTGGCCATTTCTACACGATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056779-exon-scaffold_282-1575043694:246025..246210 | TCONS_00056779-exon-scaffold_282-1575043694:246025..246210 | Clytia hemisphaerica | exon |
| TCONS_00056779-exon-scaffold_282-1575043694:244972..245361 | TCONS_00056779-exon-scaffold_282-1575043694:244972..245361 | Clytia hemisphaerica | exon |
| TCONS_00056779-exon-scaffold_282-1510915933:246025..246210 | TCONS_00056779-exon-scaffold_282-1510915933:246025..246210 | Clytia hemisphaerica | exon |
| TCONS_00056779-exon-scaffold_282-1510915933:244972..245361 | TCONS_00056779-exon-scaffold_282-1510915933:244972..245361 | Clytia hemisphaerica | exon |
| TCONS_00056779-exon-scaffold_282-1491911889:246025..246210 | TCONS_00056779-exon-scaffold_282-1491911889:246025..246210 | Clytia hemisphaerica | exon |
| TCONS_00056779-exon-scaffold_282-1491911889:244972..245361 | TCONS_00056779-exon-scaffold_282-1491911889:244972..245361 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_282 | supercontig | scaffold_282:244972..246210 - |
Blast
The following BLAST results are available for this feature:
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