TCONS_00056724 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056724
Unique NameTCONS_00056724
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2296

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056724 ID=TCONS_00056724|Name=TCONS_00056724|organism=Clytia hemisphaerica|type=transcript|length=2296bp
aaaagtttttggaaaacAGGAAAAACACTTTGGCCAGATCACTATAAGTT
GAATTAATTTCGAAAGCCAATACGATTTCAGTTAAAGAAGAACACTATCG
TCTGATAACCTCGAAACGAAGATGATCACATTGTCTTGGAAAGAGTTCAC
AATACTCGTCTTATTGTCGCTTGGTCATTTTCGGACAATATTTGCGGACA
CTACATGTTCAATGAAAACCAAATGCCAAATCGCCGAGACAAGCAGTGGT
GACAAAGTCAATGTAGACTGcagtaacaaaaacataaacGACTCGTGTCT
ATACCGAATCCTATCCACCTACTCAAACATCTCACAAATCGAAGACTTAA
ACCTATCCAAGAACAGATTATCTAGATTCATCATTAATAACAATCCAATC
AGAACAGTTCTACAAAGCCTATTATACTTGAACTTGAGCAAAAATAGTTT
TACAACAACCCCATCATGGCTTACTGAGCAGACGCCACAACTTTTGGAGC
TCGACCTCAGCTACAACAAACTCCATAACATATCGAGTCGTGATTTCTTA
AACACCACAGGATTTCGAACCGGTATCCCATCTCTGATGATCCTACATCT
TAACCATAACCGAATCTCAACGCTCCACGATCAACCTTTCATCCAAGGAT
TCCAAAATCTCCAACGACTCTTCCTAAACAATAATCTTTTCGATTTTTCA
GATTCCTGGCAACTAGAAGGATTATCCAAGCTCATTATTTTAGATCTTTC
CTATAACCACATCGCAAGACTCGATACTCAAACATTAACTTTCTCCAAAC
AGCTTTCCTTCTTGTATCTTCATCACAATCAGATCCAAGATCTGTGGTCC
CTGACTTTCGTAGAGTTCAGACAAATGAGTTATTTATCCTTATCTCACAA
CAATATCACAAGAATACATAATTATGCAATCTCCAAAAGCCTCATAGAAA
CACTTGATTTAAGTCATAATAGAATCAATATCATCCCATTTGAATCTTTC
ATGGATACTGATATCTATAAACTGTATTTGGGTCACAATCCCTTGAAGTG
CGATTGCAAACTTAGGAAAGTTTTGGACATAACAGTTAATCAGTATGTTG
AGGGAACCTGTACTACCGACaatcttttcaacaaattaAACAACATCACT
GACACTTTGTTGGAGATCAAATGCGATGCTTGCCAAATCATTGATTGTCA
AATCCACGAAAAATGCATCATTGTGCAATCTGATGTCTTCCCCAAAAAAC
CGACTCCGAAATGTGTTTGCAGGTATGGAAAACTACCAGATGGCGGATGT
GATCCTTTGCCTCGATGTAATCTTGAATGTCAAAACAACGCTTCGTGTAT
TGTAAGTACGGCTGCAACATCCAAGTGTGTTTGTACAGCTAATTTTACTG
GGAAACTATGTGAATCTCATTTTAATGGTAGCCTAACAACGTCATCGACT
ACCGCCCGTAATACACAACGTCCGGGCGTGACGCCTCTGAGGAAACACTC
ACCCTTAAGTACAGGCGTGATTGTGGTTGTCAGTCTTGTTTCAGTAGTTA
TTGGATTAATTTTTGGAGTTTATCTGTACCGAAGAATCACTCTTGGTGTT
AAGGTGCCCCATAAACAATATAAACCATTTTTCATCAGAGGCGACGATCT
TCTGAAAGGATGAACCAAATATTGGTTTGTTTGGAAACCTGGAACAATCG
CAAAATTGATGATTCGATATTGGAATGATTTTGAATCGGGCGTTCTCTTT
CGATGCTTTCACTTGCCAGAATAGTAAATACTCGATAGAGTAAAGGTTTG
ATTGACCAGAAACTGGAAGTAGGATAGTTTGTCTAGGAGTATTTAAATTC
AATCGATGGATATAggttgaaaaaatataaattgatgttAAAAAAGGCCC
TGATATTATTTGTTACAAAAGAAGAAGAGAAAAGAAGACATTTTCGAACG
ATGACATACGTGCATTTGAGCTGCGTATTCTAGCTGCTTTAACtacttta
aaatctttaaaaaaactgggacaagctggagtttttacaagctcttatgt
gatttggttggtcgttaggttaatttcattactttttctaaagaacgtgt
catatctattacttcaaatgaccaattagtgaagtatcttataacaactc
cagctcatcccaaaaaACTATGGTGAAGTAGCTATACGCGCCCTTAGCTG
CCGTGCCGTAAACTTTTAGGTAAATAAGGGTTTCAGTAGAGATCCAGCCT
TCTGAAAATGGATTgcactttttccatataatatTGAGGTTTGAAG
Run BLAST on NCBI

protein sequence of TCONS_00056724-protein

>TCONS_00056724-protein ID=TCONS_00056724-protein|Name=TCONS_00056724-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
MITLSWKEFTILVLLSLGHFRTIFADTTCSMKTKCQIAETSSGDKVNVDC
SNKNINDSCLYRILSTYSNISQIEDLNLSKNRLSRFIINNNPIRTVLQSL
LYLNLSKNSFTTTPSWLTEQTPQLLELDLSYNKLHNISSRDFLNTTGFRT
GIPSLMILHLNHNRISTLHDQPFIQGFQNLQRLFLNNNLFDFSDSWQLEG
LSKLIILDLSYNHIARLDTQTLTFSKQLSFLYLHHNQIQDLWSLTFVEFR
QMSYLSLSHNNITRIHNYAISKSLIETLDLSHNRINIIPFESFMDTDIYK
LYLGHNPLKCDCKLRKVLDITVNQYVEGTCTTDNLFNKLNNITDTLLEIK
CDACQIIDCQIHEKCIIVQSDVFPKKPTPKCVCRYGKLPDGGCDPLPRCN
LECQNNASCIVSTAATSKCVCTANFTGKLCESHFNGSLTTSSTTARNTQR
PGVTPLRKHSPLSTGVIVVVSLVSVVIGLIFGVYLYRRITLGVKVPHKQY
KPFFIRGDDLLKG
Run BLAST on NCBI

transcript from alignment at scaffold_282:21194..25700+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056724 ID=TCONS_00056724|Name=TCONS_00056724|organism=Clytia hemisphaerica|type=transcript|length=4507bp|location=Sequence derived from alignment at scaffold_282:21194..25700+ (Clytia hemisphaerica)
aaaagtttttggaaaacAGGAAAAACACTTTGGCCAGATCACTATAAGTT
GAATTAATTTCGAAAGCCAATACGATTTCAGTTAAAGAAGGTACAGTATG
CTTTTGTCTATTGgtttaatataatttttcaatttgctAATCTTTGTCCA
AAATTTACGTTGAAAGTATAGAGGATGGCTCAGTAGTTTTCCAGCAAATT
TatgtaaaagtgaaaaatgtaaaaaaaaaaaatctttcgcaGCAAGATTA
AAATTCTACACACACATAGAAAACCTTATTCCAAACTTTTGGCAATAATT
CGATTTCACTTTTACTTTAGAACACTATCGTCTGATAACCTCGAAACGAA
GATGATCACATTGTCTTGGAAAGAGTTCACAGTAAGTTTAATTCAATTCT
TTCTGGTTTAGACGAACTGAATCTCTACTAtgtaacatttgatttttaTC
GCTTTGCGGTAGCTAACGGGAGGCAAGGGGTGTTGGGATTTGcccaataa
ttttttgagaaatacatacttttttataaattttctgaTAAATTACTAAT
TTTTAATTCTATTTCTCTAAATGAAATTATAAGTGCATTTACTGGCCatt
ttaaacttaaattttcttttcaaacttcCTTCTTCGGGTCAAACAATGGT
TGGCCTTCACCAAacttcacccccccccccccaatatcaAATGCTTCCTA
AGGTGTCGAAACATCCCCTTAAGTTATTTCCAAATtggtttcttttcaaa
tttgaaatgccCCTATCTGTTAGTTTTTGGTCATACAAAAATGTATCAAT
GAAAGAAatgaatctttgtttttttttgctttctttgcCTTTCGCGAAAA
AGTTGTAACGCGAACCTTTTCACCGGAAAGGCTTTCTGGCTTATTTCCAA
ATAAAAGTAACAAAAGTCAATAAAAACAGTTAATCCTGAGTTCGGTTTAC
TCAACTCACAAGATTCTCCAAATAAAAATTATCTGAATCTTCCTGATCTA
ATCCAAATACGACTTATGGTGACAGGGAGGCCTTAATGTAAAACAAACTT
CGTAATTCAAACCCAGTCGCCTTCTCTTATCGATATGCAAATATTTCGCA
AGATTTGTTTAGATCTTAATGTCAAAGTGAGCTACCCGATAAAGCCCACG
GAAAATTAAGGCCGGTCTACTTTTGCACAAAATGAGCGAcaactttttaa
cgtttttgtaaggtcattggtcgttTGAAAAGTAAAGCAATTCCACTTTC
GCTTGAAacttttttaacgatgaaaccTTTTCTGCAGGCAAAAACCTTTA
ACAAAAGGTTTTTGCTCATTTTTGCGGGAAAGTGGAGACCGCCCTTTAAA
GCAACAATCAGTCGAATTTGGGACGTTGTCACGTGGGACAAAATACgcag
agattttttttggaaagggGATAAAAAAAGCACACTCGTCAACATTTCCT
CGCTATACGCTTCGTAACTCCTATTCGAACATGCTCTTTGACATGACAAA
TCAAGGTTTGGATTAATGACAGAAAAGTTAACTGCTAGTCTACTTAAATT
GGTTGAACTGCGTAGTTATACTTTTCATACTTCTGAGTACATCTCGAACG
ATCAATTGAGCTTTCGAGAAAAATATATCCCCAATTTTCAATCCAGTCAA
TTTTCTTCCCAATCGGGTAAGGTCTGAAATTTGGTGTAATACTATACTAT
AGGGGTGTACATAAATCCCTTCAAAATAACTGGAGCATCCAGGGTATTAA
ACTATTTTCATTTGGATCCAAAATGGATGTGCCAAAAAGTACGACCTcct
taacatgtttttttctaaagcccTTACAGTAACAGAAATCTTTTTTAATG
ccatttaatttaatttatttcttgGAATAAgatagacgatgttatcgtcc
gttacagtgatagtaaaggcgggaaaaaatggcggtatggcgttatgggc
ggtatacggaaaaattatcggcgggagagtttcgaagactggcaactcta
ccgagtgttaactcttttcggcaaaaaaacccgtttgcgaattttcttcg
gctttgggcttNCTGAAATTTGGTGTAATACTATACTATAGGGGTGtaca
aaaatcccttcaaaataACTGGAGCATCCAGGGTATTAAACTATTTTCAT
TTGGATCCAAAATGGATGTGCCAAAAAGTACGACCTCCTTAACATatgtt
tttttctaaagcccTTACAGTAACAGAAATCTTTTTTAATGCCATTTAAT
TTGTTTCTTGGAATAAGATAGCGtataatgaaaaatgaaaaatgaaaaat
gaaaaaaaaatagactTGAAAACCTTTGAATCACCATCAATATTTCATTT
ATTCAACTTTAGATACTCGTCTTATTGTCGCTTGGTCATTTTCGGACAAT
ATTTGCGGACACTACATGTTCAATGAAAACCAAATGCCAAATCGCCGAGA
CAAGCAGTGGTGACAAAGTCAATGTAGACTGcagtaacaaaaacataaac
GACTCGTGTCTATACCGAATCCTATCCACCTACTCAAACATCTCACAAAT
CGAAGACTTAAACCTATCCAAGAACAGATTATCTAGATTCATCATTAATA
ACAATCCAATCAGAACAGTTCTACAAAGCCTATTATACTTGAACTTGAGC
AAAAATAGTTTTACAACAACCCCATCATGGCTTACTGAGCAGACGCCACA
ACTTTTGGAGCTCGACCTCAGCTACAACAAACTCCATAACATATCGAGTC
GTGATTTCTTAAACACCACAGGATTTCGAACCGGTATCCCATCTCTGATG
ATCCTACATCTTAACCATAACCGAATCTCAACGCTCCACGATCAACCTTT
CATCCAAGGATTCCAAAATCTCCAACGACTCTTCCTAAACAATAATCTTT
TCGATTTTTCAGATTCCTGGCAACTAGAAGGATTATCCAAGCTCATTATT
TTAGATCTTTCCTATAACCACATCGCAAGACTCGATACTCAAACATTAAC
TTTCTCCAAACAGCTTTCCTTCTTGTATCTTCATCACAATCAGATCCAAG
ATCTGTGGTCCCTGACTTTCGTAGAGTTCAGACAAATGAGTTATTTATCC
TTATCTCACAACAATATCACAAGAATACATAATTATGCAATCTCCAAAAG
CCTCATAGAAACACTTGATTTAAGTCATAATAGAATCAATATCATCCCAT
TTGAATCTTTCATGGATACTGATATCTATAAACTGTATTTGGGTCACAAT
CCCTTGAAGTGCGATTGCAAACTTAGGAAAGTTTTGGACATAACAGTTAA
TCAGTATGTTGAGGGAACCTGTACTACCGACaatcttttcaacaaattaA
ACAACATCACTGACACTTTGTTGGAGATCAAATGCGATGCTTGCCAAATC
ATTGATTGTCAAATCCACGAAAAATGCATCATTGTGCAATCTGATGTCTT
CCCCAAAAAACCGACTCCGAAATGTGTTTGCAGGTATGGAAAACTACCAG
ATGGCGGATGTGATCCTTTGCCTCGATGTAATCTTGAATGTCAAAACAAC
GCTTCGTGTATTGTAAGTACGGCTGCAACATCCAAGTGTGTTTGTACAGC
TAATTTTACTGGGAAACTATGTGAATCTCATTTTAATGGTAGCCTAACAA
CGTCATCGACTACCGCCCGTAATACACAACGTCCGGGCGTGACGCCTCTG
AGGAAACACTCACCCTTAAGTACAGGCGTGATTGTGGTTGTCAGTCTTGT
TTCAGTAGTTATTGGATTAATTTTTGGAGTTTATCTGTACCGAAGAATCA
CTCTTGGTGTTAAGGTGCCCCATAAACAATATAAACCATTTTTCATCAGA
GGCGACGATCTTCTGAAAGGATGAACCAAATATTGGTTTGTTTGGAAACC
TGGAACAATCGCAAAATTGATGATTCGATATTGGAATGATTTTGAATCGG
GCGTTCTCTTTCGATGCTTTCACTTGCCAGAATAGTAAATACTCGATAGA
GTAAAGGTTTGATTGACCAGAAACTGGAAGTAGGATAGTTTGTCTAGGAG
TATTTAAATTCAATCGATGGATATAggttgaaaaaatataaattgatgtt
AAAAAAGGCCCTGATATTATTTGTTACAAAAGAAGAAGAGAAAAGAAGAC
ATTTTCGAACGATGACATACGTGCATTTGAGCTGCGTATTCTAGCTGCTT
TAACtactttaaaatctttaaaaaaactgggacaagctggagtttttaca
agctcttatgtgatttggttggtcgttaggttaatttcattactttttct
aaagaacgtgtcatatctattacttcaaatgaccaattagtgaagtatct
tataacaactccagctcatcccaaaaaACTATGGTGAAGTAGCTATACGC
GCCCTTAGCTGCCGTGCCGTAAACTTTTAGGTAAATAAGGGTTTCAGTAG
AGATCCAGCCTTCTGAAAATGGATTgcactttttccatataatatTGAGG
TTTGAAG

Coding sequence (CDS) from alignment at scaffold_282:21194..25700+

>TCONS_00056724 ID=TCONS_00056724|Name=TCONS_00056724|organism=Clytia hemisphaerica|type=CDS|length=3084bp|location=Sequence derived from alignment at scaffold_282:21194..25700+ (Clytia hemisphaerica)
ATGATCACATTGTCTTGGAAAGAGTTCACAATACTCGTCTTATTGTCGCT
TGGTCATTTTCGGACAATATTTGCGGACACTACATGTTCAATGAAAACCA
AATGCCAAATCGCCGAGACAAGCAGTGGTGACAAAGTCAATGTAGACTGc
agtaacaaaaacataaacGACTCGTGTCTATACCGAATCCTATCCACCTA
CTCAAACATCTCACAAATCGAAGACTTAAACCTATCCAAGAACAGATTAT
CTAGATTCATCATTAATAACAATCCAATCAGAACAGTTCTACAAAGCCTA
TTATACTTGAACTTGAGCAAAAATAGTTTTACAACAACCCCATCATGGCT
TACTGAGCAGACGCCACAACTTTTGGAGCTCGACCTCAGCTACAACAAAC
TCCATAACATATCGAGTCGTGATTTCTTAAACACCACAGGATTTCGAACC
GGTATCCCATCTCTGATGATCCTACATCTTAACCATAACCGAATCTCAAC
GCTCCACGATCAACCTTTCATCCAAGGATTCCAAAATCTCCAACGACTCT
TCCTAAACAATAATCTTTTCGATTTTTCAGATTCCTGGCAACTAGAAGGA
TTATCCAAGCTCATTATTTTAGATCTTTCCTATAACCACATCGCAAGACT
CGATACTCAAACATTAACTTTCTCCAAACAGCTTTCCTTCTTGTATCTTC
ATCACAATCAGATCCAAGATCTGTGGTCCCTGACTTTCGTAGAGTTCAGA
CAAATGAGTTATTTATCCTTATCTCACAACAATATCACAAGAATACATAA
TTATGCAATCTCCAAAAGCCTCATAGAAACACTTGATTTAAGTCATAATA
GAATCAATATCATCCCATTTGAATCTTTCATGGATACTGATATCTATAAA
CTGTATTTGGGTCACAATCCCTTGAAGTGCGATTGCAAACTTAGGAAAGT
TTTGGACATAACAGTTAATCAGTATGTTGAGGGAACCTGTACTACCGACa
atcttttcaacaaattaAACAACATCACTGACACTTTGTTGGAGATCAAA
TGCGATGCTTGCCAAATCATTGATTGTCAAATCCACGAAAAATGCATCAT
TGTGCAATCTGATGTCTTCCCCAAAAAACCGACTCCGAAATGTGTTTGCA
GGTATGGAAAACTACCAGATGGCGGATGTGATCCTTTGCCTCGATGTAAT
CTTGAATGTCAAAACAACGCTTCGTGTATTGTAAGTACGGCTGCAACATC
CAAGTGTGTTTGTACAGCTAATTTTACTGGGAAACTATGTGAATCTCATT
TTAATGGTAGCCTAACAACGTCATCGACTACCGCCCGTAATACACAACGT
CCGGGCGTGACGCCTCTGAGGAAACACTCACCCTTAAGTACAGGCGTGAT
TGTGGTTGTCAGTCTTGTTTCAGTAGTTATTGGATTAATTTTTGGAGTTT
ATCTGTACCGAAGAATCACTCTTGGTGTTAAGGTGCCCCATAAACAATAT
AAACCATTTTTCATCAGAGGCGACGATCTTCTGAAAGGATGAATGATCAC
ATTGTCTTGGAAAGAGTTCACAATACTCGTCTTATTGTCGCTTGGTCATT
TTCGGACAATATTTGCGGACACTACATGTTCAATGAAAACCAAATGCCAA
ATCGCCGAGACAAGCAGTGGTGACAAAGTCAATGTAGACTGcagtaacaa
aaacataaacGACTCGTGTCTATACCGAATCCTATCCACCTACTCAAACA
TCTCACAAATCGAAGACTTAAACCTATCCAAGAACAGATTATCTAGATTC
ATCATTAATAACAATCCAATCAGAACAGTTCTACAAAGCCTATTATACTT
GAACTTGAGCAAAAATAGTTTTACAACAACCCCATCATGGCTTACTGAGC
AGACGCCACAACTTTTGGAGCTCGACCTCAGCTACAACAAACTCCATAAC
ATATCGAGTCGTGATTTCTTAAACACCACAGGATTTCGAACCGGTATCCC
ATCTCTGATGATCCTACATCTTAACCATAACCGAATCTCAACGCTCCACG
ATCAACCTTTCATCCAAGGATTCCAAAATCTCCAACGACTCTTCCTAAAC
AATAATCTTTTCGATTTTTCAGATTCCTGGCAACTAGAAGGATTATCCAA
GCTCATTATTTTAGATCTTTCCTATAACCACATCGCAAGACTCGATACTC
AAACATTAACTTTCTCCAAACAGCTTTCCTTCTTGTATCTTCATCACAAT
CAGATCCAAGATCTGTGGTCCCTGACTTTCGTAGAGTTCAGACAAATGAG
TTATTTATCCTTATCTCACAACAATATCACAAGAATACATAATTATGCAA
TCTCCAAAAGCCTCATAGAAACACTTGATTTAAGTCATAATAGAATCAAT
ATCATCCCATTTGAATCTTTCATGGATACTGATATCTATAAACTGTATTT
GGGTCACAATCCCTTGAAGTGCGATTGCAAACTTAGGAAAGTTTTGGACA
TAACAGTTAATCAGTATGTTGAGGGAACCTGTACTACCGACaatcttttc
aacaaattaAACAACATCACTGACACTTTGTTGGAGATCAAATGCGATGC
TTGCCAAATCATTGATTGTCAAATCCACGAAAAATGCATCATTGTGCAAT
CTGATGTCTTCCCCAAAAAACCGACTCCGAAATGTGTTTGCAGGTATGGA
AAACTACCAGATGGCGGATGTGATCCTTTGCCTCGATGTAATCTTGAATG
TCAAAACAACGCTTCGTGTATTGTAAGTACGGCTGCAACATCCAAGTGTG
TTTGTACAGCTAATTTTACTGGGAAACTATGTGAATCTCATTTTAATGGT
AGCCTAACAACGTCATCGACTACCGCCCGTAATACACAACGTCCGGGCGT
GACGCCTCTGAGGAAACACTCACCCTTAAGTACAGGCGTGATTGTGGTTG
TCAGTCTTGTTTCAGTAGTTATTGGATTAATTTTTGGAGTTTATCTGTAC
CGAAGAATCACTCTTGGTGTTAAGGTGCCCCATAAACAATATAAACCATT
TTTCATCAGAGGCGACGATCTTCTGAAAGGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035741XLOC_035741Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056724-proteinTCONS_00056724-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056724-exon-scaffold_282-1491911889:21194..21283TCONS_00056724-exon-scaffold_282-1491911889:21194..21283Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1510915933:21194..21283TCONS_00056724-exon-scaffold_282-1510915933:21194..21283Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1575043694:21194..21283TCONS_00056724-exon-scaffold_282-1575043694:21194..21283Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1491911889:21514..21574TCONS_00056724-exon-scaffold_282-1491911889:21514..21574Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1510915933:21514..21574TCONS_00056724-exon-scaffold_282-1510915933:21514..21574Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1575043694:21514..21574TCONS_00056724-exon-scaffold_282-1575043694:21514..21574Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1491911889:23556..25700TCONS_00056724-exon-scaffold_282-1491911889:23556..25700Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1510915933:23556..25700TCONS_00056724-exon-scaffold_282-1510915933:23556..25700Clytia hemisphaericaexon
TCONS_00056724-exon-scaffold_282-1575043694:23556..25700TCONS_00056724-exon-scaffold_282-1575043694:23556..25700Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:21194..25700 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0340203	0.0497313	0.0385063	0.0188449	0.596966	0.290274	0.10948	0.163858	0.157709	0.141995	0.0688907	0.158686	2.38737	1.82028	4.61548	6.19575	1.59721	1.57139	2.3138	0.643954	0.164627	0.216727	0.0389886	0.0355368	0.0183926	0.277875	0	0.0249625	0.0188887	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675L_dom-like
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056724 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top