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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056684 ID=TCONS_00056684|Name=TCONS_00056684|organism=Clytia hemisphaerica|type=transcript|length=1179bp
atttttcctgaATCTTTGACTCCTGTGTCGACATATCATAGTCCTGCTcc
aaaccaaaatcagttttcaatttaaaataaatgtCTGCTACCNttttttt
aatttttcctgaaTCTTTGACTCCTGTGTCGACATATCATAGTCCTGCTc
caaaccaaaatcagttttcaatttaaaataaatgtCTGCTACCTTATCGG
GGTTCAGTTTTTCGAATCCATGCCAGCCCTTAAAAAATTGCCCCGTTTCA
ATTCTTCAGGATGGAATTTATCAATCAACATCTATAATCCTGCAGTTGCC
ATCTTGCCGAGATCTTTTGTTGGTTGTTGGGGCTTGTCAAAATTCATTTG
CAAATCTTCAACCGAAATTGCAGGGATTTGAAATCATCACCCACGCAGTG
GTCTTGTCGCGCCCCTGATTCGTTGTACGCATGCAGGACCTCACTCAGCA
TTGAACACGATGATGGTATGATCGAGCCCAAATTTGAAAGAACTTCTCGT
GTGTTCTGTGGTGTGGTTTTCAATGTCGGTTGGTGAATGATGGCTGCAAT
GTCAAGTGATTCGTCAACCTTAACAGTTATCATGTCTATCTTGTTAATGC
TGTCATCGTTGTCAGTGAATGTCAATTTATTACAGTCCTCGTGATCAGTA
ACCGTATTATCAGTATCAGAGATAATGTCGTCAGTTGTGGCGTCTTTGGT
AACAGTTTCGTCAGTTGGATGGTCATCACGGAGCAACCCTGTCCCTGTAC
TTGTGTCGACATTGTCGAGATTTGTCACTTTGTCCAGTTGGATAGCGTCA
TTTGTATTCATGTCATCAGTATTTGTTGAGTCATTTATTTTGTGGTCATC
AGTAATCATCGTAAAGTCGTCGGTATCTATTGTAATTTTCTCCTGGTTTT
CCGGAATTGTCAAAGTTTTTGTCGAACTGTCTCGGTCAACTGGTTTTACC
GTTAAGTCACAGTCATTTGAAGTTGTTTTGTCAGCCGATTTGGATGTTGT
GGCGGACGTGTTCTTCACGAAATTTTGTCGTTTCTCGGTACACACCACTG
AAAACCCAGAAGACTTTGGTTTTGCCACAGGTAAGCCCAAATTAACTTTC
TTGAACACAAACGAGTTGACGTTGGCCATCTTCTCTGTTGAGATTATGTC
TGTTTGTGGCTACAAAggaaaaaaaatgc Run BLAST on NCBI transcript from alignment at scaffold_281:13256..14606- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056684 ID=TCONS_00056684|Name=TCONS_00056684|organism=Clytia hemisphaerica|type=transcript|length=1351bp|location=Sequence derived from alignment at scaffold_281:13256..14606- (Clytia hemisphaerica)
ATTTTTCCTGAATCTTTGACTCCTGTGTCGACATATCATAGTCCTGCTCC
AAACCAAAATCAGTTTTCAATTTAAAATAAATGTCTGCTACCNTTTTTTT
AATTTTTCCTGAATCTTTGACTCCTGTGTCGACATATCATAGTCCTGCTC
CAAACCAAAATCAGTTTTCAATTTAAAATAAATGTCTGCTACCTTATCGG
GGTTCAGTTTTTCGAATCCATGCCAGCCCTTAAAAAATTGCCCCGTTTCA
ATTCTTCAGGATGGAATTTATCAATCAACATCTATAATCCTGCAGTTGCC
ATCTTGCCGAGATCTTTTGTTGGTTGTTGGGGCTTGTCAAAATTCATTTG
CAAATCTTCAACCGAAATTGCAGGTAAGGTTTCCTCGCCAGTGAAAATTA
GAGGATTGCGTTCAATCGCAGTCTTAATATCTTTCAGTTGAGATGAAATT
TCTGTGTTCATGTTTGCAACTACATTTTTGAGGGAGATGACTTCTTCTTT
TAATTGACTATTTTCAATTTTCAAAGCAAATACTTCCATTTTCAGGGATT
TGAAATCATCACCCACGCAGTGGTCTTGTCGCGCCCCTGATTCGTTGTAC
GCATGCAGGACCTCACTCAGCATTGAACACGATGATGGTATGATCGAGCC
CAAATTTGAAAGAACTTCTCGTGTGTTCTGTGGTGTGGTTTTCAATGTCG
GTTGGTGAATGATGGCTGCAATGTCAAGTGATTCGTCAACCTTAACAGTT
ATCATGTCTATCTTGTTAATGCTGTCATCGTTGTCAGTGAATGTCAATTT
ATTACAGTCCTCGTGATCAGTAACCGTATTATCAGTATCAGAGATAATGT
CGTCAGTTGTGGCGTCTTTGGTAACAGTTTCGTCAGTTGGATGGTCATCA
CGGAGCAACCCTGTCCCTGTACTTGTGTCGACATTGTCGAGATTTGTCAC
TTTGTCCAGTTGGATAGCGTCATTTGTATTCATGTCATCAGTATTTGTTG
AGTCATTTATTTTGTGGTCATCAGTAATCATCGTAAAGTCGTCGGTATCT
ATTGTAATTTTCTCCTGGTTTTCCGGAATTGTCAAAGTTTTTGTCGAACT
GTCTCGGTCAACTGGTTTTACCGTTAAGTCACAGTCATTTGAAGTTGTTT
TGTCAGCCGATTTGGATGTTGTGGCGGACGTGTTCTTCACGAAATTTTGT
CGTTTCTCGGTACACACCACTGAAAACCCAGAAGACTTTGGTTTTGCCAC
AGGTAAGCCCAAATTAACTTTCTTGAACACAAACGAGTTGACGTTGGCCA
TCTTCTCTGTTGAGATTATGTCTGTTTGTGGCTACAAAGGAAAAAAAATG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056684-exon-scaffold_281-1575043694:14234..14606 | TCONS_00056684-exon-scaffold_281-1575043694:14234..14606 | Clytia hemisphaerica | exon |
| TCONS_00056684-exon-scaffold_281-1575043694:13256..14061 | TCONS_00056684-exon-scaffold_281-1575043694:13256..14061 | Clytia hemisphaerica | exon |
| TCONS_00056684-exon-scaffold_281-1510915933:14234..14606 | TCONS_00056684-exon-scaffold_281-1510915933:14234..14606 | Clytia hemisphaerica | exon |
| TCONS_00056684-exon-scaffold_281-1510915933:13256..14061 | TCONS_00056684-exon-scaffold_281-1510915933:13256..14061 | Clytia hemisphaerica | exon |
| TCONS_00056684-exon-scaffold_281-1491911889:14234..14606 | TCONS_00056684-exon-scaffold_281-1491911889:14234..14606 | Clytia hemisphaerica | exon |
| TCONS_00056684-exon-scaffold_281-1491911889:13256..14061 | TCONS_00056684-exon-scaffold_281-1491911889:13256..14061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_281 | supercontig | scaffold_281:13256..14606 - |
Blast
The following BLAST results are available for this feature:
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