TCONS_00056543 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056543
Unique NameTCONS_00056543
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056543 ID=TCONS_00056543|Name=TCONS_00056543|organism=Clytia hemisphaerica|type=transcript|length=132bp
CGTCGCAATATCCAAAGACTTCCACAATCAAACAAGCTAAACCATCATCA
TCTTCGATCGAACCGAAAATAGAAGCATCGATCACCACCATGCAACCTTC
ACAATCAACAGCACCAGTAAATATAATTCACT
Run BLAST on NCBI

transcript from alignment at scaffold_276:407489..407620

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056543 ID=TCONS_00056543|Name=TCONS_00056543|organism=Clytia hemisphaerica|type=transcript|length=132bp|location=Sequence derived from alignment at scaffold_276:407489..407620 (Clytia hemisphaerica)
AGTGAATTATATTTACTGGTGCTGTTGATTGTGAAGGTTGCATGGTGGTG
ATCGATGCTTCTATTTTCGGTTCGATCGAAGATGATGATGGTTTAGCTTG
TTTGATTGTGGAAGTCTTTGGATATTGCGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035623XLOC_035623Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056543-exon-scaffold_276-1491911889:407489..407620TCONS_00056543-exon-scaffold_276-1491911889:407489..407620Clytia hemisphaericaexon
TCONS_00056543-exon-scaffold_276-1510915933:407489..407620TCONS_00056543-exon-scaffold_276-1510915933:407489..407620Clytia hemisphaericaexon
TCONS_00056543-exon-scaffold_276-1575043694:407489..407620TCONS_00056543-exon-scaffold_276-1575043694:407489..407620Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:407489..407620 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056543 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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