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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056530 ID=TCONS_00056530|Name=TCONS_00056530|organism=Clytia hemisphaerica|type=transcript|length=1303bp
TAGAAAAATAGATCAATGTTTTGTGTGTTATATTTATATATCGGACAGTT
TGCACACACTGtaatatttgttgttttttatcttaaatGACGTTATTCGT
GAtttgcaccactggagagtcttctgagaacttccatccaaatacgtcac
ttaaacaatagaaaaagtgacgtattgggtgaagaaaaaaacagaaaagt
tgcataatttcgtgaagtcgttgcagtggtgcatatcatataTTGTAATG
AATACAGTATCCCTAAACTGTATTATTGGGCTttcccagaaaaaaaaaca
tatattctGATTACTCATGAGACTGATATGAATTTATCATTAATATTAAT
AATCTCAATATAAAGTTATTCATTCACTTATCAATCACGTTACCAAGCTC
TCTTGATACAAATGACAAGTCATTTTTATATTCATGAAGTAGGGTTGGAC
GATTTTTTCAGGGGATCTAACCACTAACCTATATTCAACACCATGGACTA
TAAGCCAGATCCGCTGTTACTAGGGGGAGAAGGGGTGAAATTATTGGACG
CTactgaaatttgacttttatttttagAGGCTATTGTACTTAAAAgaatt
gagtttcaagcccgaagagctaaaggcgagactcctggatgggaaatgaa
accacttatttcccatccagaacgcccacgcgtagtttttacaccaacgc
cagattgaaactaaaatctatcgctagatttaatGCAGTTCTCCAAAACA
AatgaaccgctagatacaatccgtcctCGTGACGctttctatgcgcgttt
tggatgggaaataagtggcttcaatttctcttgcctaggttaaagggtta
aagtttcagctctagcccttcgggcttgaaactcaatgcttaAAAGGATA
TCCTTTATAAAGTTGGATAATATTGAGAACGGGGATAAATCCAGGGATGT
GAAAGGATGTTCAGAGTGAGCCAAAGCAAAAGTAGGACGAGTAATGGCgt
gaaaattttagttttgcCTAGGATGCGCGCATCTCTCAGTTTAGGGCCCG
GGGCGTGAAATTTCGTTTAGTGGCGGTAGACAAGGAATACGCCCCTGCTC
TCCGCCCCCTTGTCTCTACTAGACCCAGTATCTTTCCTCGTGGTCTTCAT
TCTCATTCGATCCTTCGCGAAGTTCGGGTGTTTATTTTTCAGCAGCTACA
AAAATTTTCATACTATCAAAAAGAAATAATACCATACCTTGTACAAAGAA
AAACTCGACAAAAAACTCAGACCAGGAACGTTCAAGGAAAGATTGGGGTA
AAT Run BLAST on NCBI transcript from alignment at scaffold_276:81060..82362 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056530 ID=TCONS_00056530|Name=TCONS_00056530|organism=Clytia hemisphaerica|type=transcript|length=1303bp|location=Sequence derived from alignment at scaffold_276:81060..82362 (Clytia hemisphaerica)
ATTTACCCCAATCTTTCCTTGAACGTTCCTGGTCTGAGTTTTTTGTCGAG
TTTTTCTTTGTACAAGGTATGGTATTATTTCTTTTTGATAGTATGAAAAT
TTTTGTAGCTGCTGAAAAATAAACACCCGAACTTCGCGAAGGATCGAATG
AGAATGAAGACCACGAGGAAAGATACTGGGTCTAGTAGAGACAAGGGGGC
GGAGAGCAGGGGCGTATTCCTTGTCTACCGCCACTAAACGAAATTTCACG
CCCCGGGCCCTAAACTGAGAGATGCGCGCATCCTAGgcaaaactaaaatt
ttcacGCCATTACTCGTCCTACTTTTGCTTTGGCTCACTCTGAACATCCT
TTCACATCCCTGGATTTATCCCCGTTCTCAATATTATCCAACTTTATAAA
GGATATCCTTTtaagcattgagtttcaagcccgaagggctagagctgaaa
ctttaaccctttaacctaggcaagagaaattgaagccacttatttcccat
ccaaaacgcgcatagaaagCGTCACGaggacggattgtatctagcggttc
atTTGTTTTGGAGAACTGCattaaatctagcgatagattttagtttcaat
ctggcgttggtgtaaaaactacgcgtgggcgttctggatgggaaataagt
ggtttcatttcccatccaggagtctcgcctttagctcttcgggcttgaaa
ctcaattcTTTTAAGTACAATAGCCTctaaaaataaaagtcaaatttcag
tAGCGTCCAATAATTTCACCCCTTCTCCCCCTAGTAACAGCGGATCTGGC
TTATAGTCCATGGTGTTGAATATAGGTTAGTGGTTAGATCCCCTGAAAAA
ATCGTCCAACCCTACTTCATGAATATAAAAATGACTTGTCATTTGTATCA
AGAGAGCTTGGTAACGTGATTGATAAGTGAATGAATAACTTTATATTGAG
ATTATTAATATTAATGATAAATTCATATCAGTCTCATGAGTAATCagaat
atatgtttttttttctgggaaAGCCCAATAATACAGTTTAGGGATACTGT
ATTCATTACAAtatatgatatgcaccactgcaacgacttcacgaaattat
gcaacttttctgtttttttcttcacccaatacgtcactttttctattgtt
taagtgacgtatttggatggaagttctcagaagactctccagtggtgcaa
aTCACGAATAACGTCatttaagataaaaaacaacaaatattaCAGTGTGT
GCAAACTGTCCGATATATAAATATAACACACAAAACATTGATCTATTTTT
CTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056530-exon-scaffold_276-1491911889:81060..82362 | TCONS_00056530-exon-scaffold_276-1491911889:81060..82362 | Clytia hemisphaerica | exon |
| TCONS_00056530-exon-scaffold_276-1510915933:81060..82362 | TCONS_00056530-exon-scaffold_276-1510915933:81060..82362 | Clytia hemisphaerica | exon |
| TCONS_00056530-exon-scaffold_276-1575043694:81060..82362 | TCONS_00056530-exon-scaffold_276-1575043694:81060..82362 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:81060..82362 . |
Blast
The following BLAST results are available for this feature:
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