TCONS_00056436 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056436
Unique NameTCONS_00056436
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1397

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056436 ID=TCONS_00056436|Name=TCONS_00056436|organism=Clytia hemisphaerica|type=transcript|length=1397bp
TATGTAACCTGGAGAAATTCATTTAACTGTATTTGTTTGTTGCCTGCGAT
GGCTATTTAATATAAGTGCTATTCTTTTTAGGTCTAAAAAAATGTCTCTG
TGGATTAGAAGAGCCACAGAAGTACTTAAAAGTGCAAAAATAGCTACTGG
AGTTCNATTAGAAGAGCCACAGAAGTacttaaaaatgcaaaaatagctAC
TGGAGTAAGAACAAAAATTGTACCCAAGAATGCTGGCAAAATAGATTACA
GGCGTGTTGGTTTCTTTTTTGCTGGTACATCAATTGCAACTACTTATGGT
GTCTTGGTATTGTATGCTGAAAGCATAGAAGATAAACCTAAAAAGAAATT
GGTAATCCTTGGCTCTGGCTGGGGTGCTGTCAGTTTGATAAAATCCCTAA
AACCTGGTGAATTTGATGTCTCAGTAGTATCACCagagaattatttttta
tttacaccACTTTTACCAAGCGTCACTGTGGGTACTGTTGAAGGTAGAAG
CATCACTGAACCTATACGTAAGATACTGGCAAAGCGACATAAACATGGTG
CAAAGTTCTATGAAGGTCAATGCACTGAAATTGACATTGAGGGAAATACT
GTCAAATGTAAAGATCTATCAGAAATAACTGGACATCGTGAAGAGTTCTC
TTTGAATTATGATTATTTGGTGTTAGCGATTGGTGCACAAACTGCTACAT
ATAACATCAAAGGCATTGAGGAGCACACTCATTACTTGAAGAACATGAAG
CAAGCACAAGAGATTCGTAAACACGTCATTGACTCATTTGAAACAGCTGC
CATCCCTGGTCAACCTGACCATGAAGTGAGACGCTTGTTAAATTTCGTTG
TCGTTGGTGGTGGTCCTACTGGTGTGGAGTTCGCTGCTGAATTAAGAGAT
TTTGTGAAGGAGGATTTACGAAAGATTTTCCCTGATGAAATGATCGACAA
ATCGACTATTACGCTTATCGATGGATTGAATAAAATCTTGAACAGTTACT
CTGACGAGATCAGTCGTTACACCGAGAACAAGTTCCAAAGTGAGGGGATC
AATGTTGTCACAAACACTTTCGTGGCTGGTGTCGAAGATAAAATCATCCA
TTTGAAAGACGCTAAAACGCGTGATGTACGTAGCATGGATTACGGTATGT
GTGTATGGGCTGCTGGAATAGCACCACGTGACCTGACCAAACAATTGATG
CAACAAATCCCTGGCCAAACGAACAGaATGGCTCTGATTACTGACCCCTT
CATGAAAGTCAAAAACACTGAAAATATCNGAGCTTGCAAAAGCATTGAAG
TTGTTAAAACAAGAATTAAAACAATAAATAACGAATACCTCTAGAAAAAA
CCCTTTCCAACTTTCGCTATCCTGGAAAAGGCAAAGGAAAATTTTCG
Run BLAST on NCBI

protein sequence of TCONS_00056436-protein

>TCONS_00056436-protein ID=TCONS_00056436-protein|Name=TCONS_00056436-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MKQAQEIRKHVIDSFETAAIPGQPDHEVRRLLNFVVVGGGPTGVEFAAEL
RDFVKEDLRKIFPDEMIDKSTITLIDGLNKILNSYSDEISRYTENKFQSE
GINVVTNTFVAGVEDKIIHLKDAKTRDVRSMDYGMCVWAAGIAPRDLTKQ
LMQQIPGQTNRMALITDPFMKVKNTENIXACKSIEVVKTRIKTINNEYL
Run BLAST on NCBI

transcript from alignment at scaffold_276:587386..594616+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056436 ID=TCONS_00056436|Name=TCONS_00056436|organism=Clytia hemisphaerica|type=transcript|length=7231bp|location=Sequence derived from alignment at scaffold_276:587386..594616+ (Clytia hemisphaerica)
TATGTAACCTGGAGAAATTCATTTAACTGTATTTGTTTGTTGCCTGCGAT GGCTATTTAATATAAGTGCTATTCTTTTTAGGTCTAAAAAAATGTCTCTG TGGATTAGAAGAGCCACAGAAGTACTTAAAAGTGCAAAAATAGCTACTGG AGTTCNATTAGAAGAGCCACAGAAGTacttaaaaatgcaaaaatagctAC TGGAGTAAGAACAAAAATTGTACCCAAGAATGCTGGCAAAATAGATTACA GGCGTGTTGGTTTCTTTTTTGCTGGTACATCAATTGCAACTACTTATGGT GTCTTGGTATTGTATGCTGAAAGCATAGAAGATAAACCTAAAAAGAAATT GGTAATCCTTGGCTCTGGCTGGGGTGCTGTCAGTTTGATAAAATCCCTAA AACCTGGTGAATTTGATGTCTCAGTAGTATCACCagagaattatttttta tttacaccACTTTTACCAAGCGTCACTGTGGGTACTGTTGAAGGTAGAAG CATCACTGAACCTATACGTAAGATACTGGCAAAGCGACATAAACATGGTG CAAAGTTCTATGAAGGTCAATGCACTGAAATTGACATTGAGGGAAATACT GTCAAATGTAAAGATCTATCAGGTATTGTAGactttttcattcttcaacc CACAAGCCAATCTAATCGTAGTAGAAAGCCAAACTCTCCCAAAGAGGCCC CCAACAGACCTTCAATTCaggcaatcacgcaatttttttcgcaattcaca tAATTTCTGGTCACACAAAGTTTTCCAATTCACACATCCAtgcaatttta taaaaattttcacgcattcacacaagTGAAAAAGGCCATTCACCTCGACT CATGCTCTCGGCGGGGGAGAGGGGCGGCGACTTAAAAAGGAAGATAAACT TTTATAATAAGGTGAACTTATGAGCTTACTGTGATGCTTATTTTTCTCAA TGTTTGAGCTGGCagaataaattttaattttcccacaaaattttcttctt cttttttttacagtgtgtatagtcttttttctatgagaacaattttataa gaacacgaagttgaaaatttgcccaaacttaagaacaaactaagaaCAAT GTGAgtctcaaatttcaaaaaattaagatcatCCCAGTCTGAGCCAAAGT TTACTGGTACTTGATGTTATTGATTTATGATCTAATAAATACATTATATT TTTTCTCTAAAGAAATAACTGGACATCGTGAAGAGTTCTCTTTGAATTAT GATTATTTGGTGTTAGCGATTGGTGCACAAACTGCTACATATAACATCAA AGGTATGATCTTTCCTCTAGTCTTgtgaagatttctttttttattgctta tacaagggccaaattgaaaagtcccgttcctgtcacggaaggaaatcaga gccttttttggtctttttttgaaaaatggtaaaatgaatgaaaaNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNattctgagctccatacagggttgagctggttcccaa tggttctaaaccttgTAGGACACTCTCCTGCAataaattagacccattga agtccaagatttctaaaaacaacaagatatttttaatcagtcacggaagg acaaggtgaaagtgtcacggaaggacaataATTTCAGACCTTGTAAGTGA ATATGAAGGAGGTTGCTTTGGaatgtaatttcattttttNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTTGGAAAATTTAAGggttatttaaataaaaaatcacagttacttatt ttgtttgtaagatttttgattttgtgttttggttgacgacttttcaattt ggcccaCAAGATGGATTTTGGCATTGAAAGCGAGAAAAAGCCAGTAAAAT TCGGAGGCTTTACTATAAAAGACTTAGTGGGAATCTAACTAAAAAGACTA ATTAAAAAACTCCAGTATCACAACTATATTACACGAAAACATAATTAGTA TAAAACACGTGTACTAACAGATActaaatattttcttatcattgttttga tgttgtcaCGGGTCAGTggagttttttatttcatatttaacATGACGATG CATCTCACAAAAGTTcgacagttgactctctctaattcgatcttcaaggg accaagaattttcttcgaattagagagtgatTTTAATACAGAAAGTAATT TGTATTAATTTCTGAGGTGACAaatattttagtttgaattatagaaagat tcgaatagaaGAGTTTGGTTGTATTCATATCTGATTATTCTTATAAACTT ATCAATTCCAGGCATTGAGGAGCACACTCATTACTTGAAGAACATGAAGC AAGCACAAGAGATTCGTAAACACGTCATTGACTCATTTGAAACAGCTGCC ATCCCTGGTCAACCTGACCATGAAGTGAGACGCTTGTTAAATTTCGTTGT CGTTGGTGGTGGTCCTACTGGTAAGTGAAGAAGTCCTATAAAAGAGCTTA AAAATTCCCAAATACAGTGCGTCTTATAAGGGTTATCACAAGCGACTTTC AATACAAATAAGTTCCAGTAAAAGAAACGCTACGTAACAttgagcttttc cagaaaaatatcttacccccactgttgaggatattgatttttcgaagtat cgaaccccctggatatcctactttatcaGTAAAATagtggatatccactc ttaaaaatatgctcaaccctctggatatcctctcttataaagatgcttac atcttgatattgtatttttttttacttgaaaagacactttaccccctgga tatccgctcccttgtagttatttaaccccctggatatccacttttgaaca aaaatcattaacccctggatatccaatatcctcaacagggggtgcacgga ctatttctggaaaagcccattcttgGACGTTCCTGACCGTTCCCTTTTAT TTACcagtttgaaaatgttttagaaCGTTCCAATACGTTTCCGAACGTTC TTATCAAGTTGAATATTAACCTTTTGACAACAAGAATCGTTCGCGAACGT TCAGGAACATTCCCTAACGTTCTGGAACGCTCGCGAACGGAAGGAAGGTG TGAGATTCTCAATCAGATAGGTCTTCAAACTATAGCCTGTACTTGACGTC ATGCCAACTTTTCTACgccatttttttgattttatcgaGGAACTTGCATA ATTTCTGGAAACGTTGAGGGAAATAACAGTtactatttatttatttttca ccaGGTGTGGAGTTCGCTGCTGAATTAAGAGATTTTGTGAAGGAGGATTT ACGAAAGATTTTCCCTGATGAAATGATCGACAAATCGACTATTACGCTTA TCGATGGATTGAATAAAATCTTGAACAGTTACTCTGACGAGGTAAGGTGT AGTGATTGGTCGCAgtaaattggaaaaattctctgTTTTTTGTGAGTTTT AATCTATCTAAAAGTGAATTGTTTTACTTCAAAAGTTTTAATTACAGGTG ACTATTTGATAGGtcaaattatttaaaagttttaaacatTGTAGAATTGA ATACGAAAATACGAAGAATACATTATAATAATGGTTATTAGTATTACATT AGTAGTTATACTACGACACCGAAACTCTGGATGTAAAGCCTTACGATGGG AATTGATTTTTAAACCATACTCTTATTtcggttgaaaaaaaaacggaCTG AATGAtgctcaaaatttcatatctcCTTTAAAATACAGTGTGTCCTAAAA AAGCGGACACATTTTTATAAGTAAATAAAAGAGGTAAAATCCGCAAAACT TATGATCTAAACTGGGCTTAGAATGATTGAAATAAGTTTACAATTCTTTA TTCAATCGATAGATATTTAATTCCCAAGACGACTGAATAGGTTTTGGAGA TTGAAGTATTAAGTAAACAAGTAATAACATTTGGCATTTAAATAATGAGG ATTTTACTCAGAATAAAAATTTGTCGCACACACTGTATATAATCTTGTTA TCATTATTATCAATGTTCAGATCAGTCGTTACACCGAGAACAAGTTCCAA AGTGAGGGGATCAATGTTGTCACAAACACTTTCGTGGCTGGTGTCGAAGA TAAAATCATCCATTTGAAAGACGCTAAAACGCGTGATGTACGTAGCATGG ATTACGGTATGTGTGTATGGGCTGCTGGAATAGCACCACGTGACCTGACC AAACAATTGATGCAACAAATCCCTGGCCAAACGAACAGGTATGGGTCAAT ATTAAGCTTGGTTGATGATATTTAAATTGAGGTCTGAATCGCTATGAAAA AATACTGAGCTTGCAAAAGCATTGAAGTTGTTAAAACAAGAATTAAAACA ATAAATAACGAATACCTCTAGAAAAAACCCTTTCCAACTTTCGCTATCCT GGAAAAGGCAAAGGAAAATTTTCGGAATTGAAAGGACGGTGAAATTTTAG CCGACGGGAAGTGAAATCTCACCCGAAACGCATTCGTGAATTCCGTTGTA AATTGGGAGCAAGGGGGGTAGGACAGCCATTCTAATTCACGTCGGCATTC GGCTATTGTCGACGCAAATTTGCCTTAGGCCTTTGCTAACGCAAATGTCG ATGTAGTAAATTTGGCTTTTGCCGACGTAAAAATGTTTACTGTACTATAG AAGCGAACATTTTTGCCGACGTAAAAATGTTTACTGTACTATAGAACCGA ACATTTTTGCCGACGCAAATAAATCTGAATTAAGAAGGCTGTAGGAATAA TGGCTTTCACATTAAAAATATTGGTGAAATCCTcaactttcttcttttca ttttgaatagaATGGCTCTGATTACTGACCCCTTCATGAAAGTCAAAAAC ACTGAAAATATCNGAGCTTGCAAAAGCATTGAAGTTGTTAAAACAAGAAT TAAAACAATAAATAACGAATACCTCTAGAAAAAACCCTTTCCAACTTTCG CTATCCTGGAAAAGGCAAAGGAAAATTTTCG

Coding sequence (CDS) from alignment at scaffold_276:587386..594616+

>TCONS_00056436 ID=TCONS_00056436|Name=TCONS_00056436|organism=Clytia hemisphaerica|type=CDS|length=2400bp|location=Sequence derived from alignment at scaffold_276:587386..594616+ (Clytia hemisphaerica)
ATGAAGCAAGCACAAGAGATTCGTAAACACGTCATTGACTCATTTGAAAC
AGCTGCCATCCCTGGTCAACCTGACCATGAAGTGAGACGCTTGTTAAATT
TCGTTGTCGTTGGTGGTGGTCCTACTGGTGTGGAGTTCGCTGCTGAATTA
AGAGATTTTGTGAAGGAGGATTTACGAAAGATTTTCCCTGATGAAATGAT
CGACAAATCGACTATTACGCTTATCGATGGATTGAATAAAATCTTGAACA
GTTACTCTGACGAGATCAGTCGTTACACCGAGAACAAGTTCCAAAGTGAG
GGGATCAATGTTGTCACAAACACTTTCGTGGCTGGTGTCGAAGATAAAAT
CATCCATTTGAAAGACGCTAAAACGCGTGATGTACGTAGCATGGATTACG
GTATGTGTGTATGGGCTGCTGGAATAGCACCACGTGACCTGACCAAACAA
TTGATGCAACAAATCCCTGGCCAAACGAACAGaATGGCTCTGATTACTGA
CCCCTTCATGAAAGTCAAAAACACTGAAAATATCNGAGCTTGCAAAAGCA
TTGAAGTTGTTAAAACAAGAATTAAAACAATAAATAACGAATACCTCTAG
ATGAAGCAAGCACAAGAGATTCGTAAACACGTCATTGACTCATTTGAAAC
AGCTGCCATCCCTGGTCAACCTGACCATGAAGTGAGACGCTTGTTAAATT
TCGTTGTCGTTGGTGGTGGTCCTACTGGTGTGGAGTTCGCTGCTGAATTA
AGAGATTTTGTGAAGGAGGATTTACGAAAGATTTTCCCTGATGAAATGAT
CGACAAATCGACTATTACGCTTATCGATGGATTGAATAAAATCTTGAACA
GTTACTCTGACGAGATCAGTCGTTACACCGAGAACAAGTTCCAAAGTGAG
GGGATCAATGTTGTCACAAACACTTTCGTGGCTGGTGTCGAAGATAAAAT
CATCCATTTGAAAGACGCTAAAACGCGTGATGTACGTAGCATGGATTACG
GTATGTGTGTATGGGCTGCTGGAATAGCACCACGTGACCTGACCAAACAA
TTGATGCAACAAATCCCTGGCCAAACGAACAGaATGGCTCTGATTACTGA
CCCCTTCATGAAAGTCAAAAACACTGAAAATATCNGAGCTTGCAAAAGCA
TTGAAGTTGTTAAAACAAGAATTAAAACAATAAATAACGAATACCTCTAG
ATGAAGCAAGCACAAGAGATTCGTAAACACGTCATTGACTCATTTGAAAC
AGCTGCCATCCCTGGTCAACCTGACCATGAAGTGAGACGCTTGTTAAATT
TCGTTGTCGTTGGTGGTGGTCCTACTGGTGTGGAGTTCGCTGCTGAATTA
AGAGATTTTGTGAAGGAGGATTTACGAAAGATTTTCCCTGATGAAATGAT
CGACAAATCGACTATTACGCTTATCGATGGATTGAATAAAATCTTGAACA
GTTACTCTGACGAGATCAGTCGTTACACCGAGAACAAGTTCCAAAGTGAG
GGGATCAATGTTGTCACAAACACTTTCGTGGCTGGTGTCGAAGATAAAAT
CATCCATTTGAAAGACGCTAAAACGCGTGATGTACGTAGCATGGATTACG
GTATGTGTGTATGGGCTGCTGGAATAGCACCACGTGACCTGACCAAACAA
TTGATGCAACAAATCCCTGGCCAAACGAACAGaATGGCTCTGATTACTGA
CCCCTTCATGAAAGTCAAAAACACTGAAAATATCNGAGCTTGCAAAAGCA
TTGAAGTTGTTAAAACAAGAATTAAAACAATAAATAACGAATACCTCTAG
ATGAAGCAAGCACAAGAGATTCGTAAACACGTCATTGACTCATTTGAAAC
AGCTGCCATCCCTGGTCAACCTGACCATGAAGTGAGACGCTTGTTAAATT
TCGTTGTCGTTGGTGGTGGTCCTACTGGTGTGGAGTTCGCTGCTGAATTA
AGAGATTTTGTGAAGGAGGATTTACGAAAGATTTTCCCTGATGAAATGAT
CGACAAATCGACTATTACGCTTATCGATGGATTGAATAAAATCTTGAACA
GTTACTCTGACGAGATCAGTCGTTACACCGAGAACAAGTTCCAAAGTGAG
GGGATCAATGTTGTCACAAACACTTTCGTGGCTGGTGTCGAAGATAAAAT
CATCCATTTGAAAGACGCTAAAACGCGTGATGTACGTAGCATGGATTACG
GTATGTGTGTATGGGCTGCTGGAATAGCACCACGTGACCTGACCAAACAA
TTGATGCAACAAATCCCTGGCCAAACGAACAGaATGGCTCTGATTACTGA
CCCCTTCATGAAAGTCAAAAACACTGAAAATATCNGAGCTTGCAAAAGCA
TTGAAGTTGTTAAAACAAGAATTAAAACAATAAATAACGAATACCTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035568XLOC_035568Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056436-exon-scaffold_276-1491911889:587386..588007TCONS_00056436-exon-scaffold_276-1491911889:587386..588007Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1510915933:587386..588007TCONS_00056436-exon-scaffold_276-1510915933:587386..588007Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1575043694:587386..588007TCONS_00056436-exon-scaffold_276-1575043694:587386..588007Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1491911889:588598..588687TCONS_00056436-exon-scaffold_276-1491911889:588598..588687Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1510915933:588598..588687TCONS_00056436-exon-scaffold_276-1510915933:588598..588687Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1575043694:588598..588687TCONS_00056436-exon-scaffold_276-1575043694:588598..588687Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1491911889:591947..592105TCONS_00056436-exon-scaffold_276-1491911889:591947..592105Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1510915933:591947..592105TCONS_00056436-exon-scaffold_276-1510915933:591947..592105Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1575043694:591947..592105TCONS_00056436-exon-scaffold_276-1575043694:591947..592105Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1491911889:592890..593026TCONS_00056436-exon-scaffold_276-1491911889:592890..593026Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1510915933:592890..593026TCONS_00056436-exon-scaffold_276-1510915933:592890..593026Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1575043694:592890..593026TCONS_00056436-exon-scaffold_276-1575043694:592890..593026Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1491911889:593656..593873TCONS_00056436-exon-scaffold_276-1491911889:593656..593873Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1510915933:593656..593873TCONS_00056436-exon-scaffold_276-1510915933:593656..593873Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1575043694:593656..593873TCONS_00056436-exon-scaffold_276-1575043694:593656..593873Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1491911889:594446..594616TCONS_00056436-exon-scaffold_276-1491911889:594446..594616Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1510915933:594446..594616TCONS_00056436-exon-scaffold_276-1510915933:594446..594616Clytia hemisphaericaexon
TCONS_00056436-exon-scaffold_276-1575043694:594446..594616TCONS_00056436-exon-scaffold_276-1575043694:594446..594616Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056436-proteinTCONS_00056436-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:587386..594616 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.4684 13.0756 33.4071 33.1468 19.8946 16.2938 25.1482 25.6282 22.4978 32.2623 12.8284 12.2118 18.3518 10.7256 9.6827 11.3191 36.5195 40.1887 10.3173 12.9555 27.2279 29.6177 14.792 19.8609 17.1217 18.829 10.36 5.46269 17.3022 14.8591
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056436 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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