TCONS_00056348 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056348
Unique NameTCONS_00056348
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3235

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056348 ID=TCONS_00056348|Name=TCONS_00056348|organism=Clytia hemisphaerica|type=transcript|length=3235bp
GATCGGATTTACAACAGGGcggcactttcactttcacttttcgataaaaa
agtgaccaaaaaactgcaaaaaagtTGACTGGTGACAATCTCAATATCAA
TCACTCTCTCATCTCTCACTATCATCAGTGACAGTGTTGCCTGGACTGTT
ATCCCTCGTTATCCCTCTCTCTTCTTGGCGTTTTGTCATTGAAAACAAAC
GACCAAGCAAACATACACTCAAGAATGGCTTCAACAAACAAAGAACCGTT
ACCCACAGATGAGAGAAAGGTACAACATTCATCCATCGATAGTCGAAACA
ACTCCTTTGACTCTCTCTACCCTGATGGCGATGATCATGGTCTGATGGCA
TCAATCGAAAGTCATGGCTCGTTATGGAGGCAATATTCCCTTATCAACAA
GAAATACCAAGACAATATCAAGTCACAAGATCTATGTTTCTGTTGCGACA
GTGATTCTTTTCGCCATGGAACTTTGAAAACATTATTTCTGCTTGTGGTT
GCATTTGGATTAATTTGCtctttttttgctttgagattATCTGTTTTCTC
AACTCAAAGTGTAACTCTTACAGGAGGTGATCAAAAACTGGTTCCCATCT
CCACTTATTTCAATAAAGGTCTTAAACTAAAGGAGAGTTGTAATCAGGTC
ACCCAGGAAGGCAGCAAATTATATTTGTTACCAGAATCACCACAAATATC
AGCAGAACGTAAAATTTACACCGAAGCTGTACAATTTCTCATGCCATCTT
GGTCTTATCAATATTGGGGCTTTAGACTCTTGAAAGGAACAGAGCTGACT
ATTTCAATATGTGCTGATCTTCACTTACAGTTTTATCTCATTAAAGGTGA
AAGAAAGCTGAAATCATGGAAAGAAACGACTCTTTTCAACGATTATGACT
TCCAAAGCAATATACGTCCAAAGGAAAGCTGCTCTAAGAAGGAAAACCTT
AAAAGTCACTCAGTACAAGTTCATGAGAGCgatattttctatattttgtt
CTCGAGTTCAGTAGGCTGGCGTTTTTTCACTGAAGTCACTACCGTCTTGC
AATTCAACCGAACAGTATATGATACGTCACAAAGCTATTATTCTTGCTTA
CTATCAAATAGTTCTTGCATTGGAGAACTTCATCATGGTTCAGAGGACAT
TGCTTTAGTTGAAACAGAACTAGACATCAATCATCCAACGACTTCATTCA
AGAATTACAAAATCTCTTACGAACCTTTACCGAGAAACGAAttctatttt
aaattgtttGGTTTTGTATATTTGACTGTTGTCTTAGCAACCGTACTGTA
CTCTGTATGGCGCTTTTGTGTCACAATCCACGGGAAAGGTCGGAAAGAGC
CAGGAACAAGTGAAGAGCGTAAACCACTGCTCAAAAACACGAAACCGCAC
TCATACTCGTTGAGGAGTCACCCAGGCGGTAAAGATCAATGGCTCGTTGT
CAACCGCTCAAGTGGAGAATCAAACGACTTACGTATAGACGAGCGAGAAA
CATCGTCCGTTCTTGAAGAATCTGTTTCGCCGTCACGTCATCGTCTTATT
ACGACGACGTCAAATTATTCGACATACAGCAACGAATCTGAACAGTCGTT
ATTTATGAACAGACGTGGTACGAACAATGCTGATATGATGCGTGCTATGC
AACAAAACATGGAACAACAGCAGCTCTTGGATTCTGTCATGACGTCTGCA
GGTGTCAGTGCTATTTGATTTACTTCTAATCTAACGAATTATCAAAATGC
GTAATGTTAAGATTACCGCCCTAaccgcacgatgggttattttttctctt
ttgacgccttcaaagagagcaattaatcgttaattgaattaagagagcaa
ttaatcgttaatcacactcttcaacgaggtgccaatgtttacaaaatata
GTTTAATGTTCTTTCTTtcgtttttttgacttttttgaaagttttcgtTC
TAATATTTGTGTCGTCACAAGCAATTTGAAGTACAAATAAAATGTAACGT
TCTCGGACGTTCCATAGCGTTCATGGAACGTTCCAGATCGTGCTTAATCG
TTCTCAAACGTTTCAGAACATTCAGTAACGCTTAAGAACGTTGGAACGTT
CATGAACGCTCTCGAACGATCATATGCGTCAAAAGGTTAATAATGAACTC
GATAAGAACGTTCTTGAACTTTTTAGAATGTCCCTAAACGTTCCAAGACA
TTCCTACACTAGTAAATAATAGGGAACGCTTAGGAACGTTCAGGAACGTT
CAATAACGTTCCATATCGTTCGTTTTACTGGAACGTatcattttatttgt
atttaAAGTTGTTTATGATGACAATTTTTGTGCGATAATGATAACCGGTT
GTAATGGAGATTCGTATTTATACCACCTTCACACGTCATTACATGTTACT
TACGGAATCAACCAATAGAACGAATTCGTTTTGAGTTGGTACGAATGATT
GTAAAAGGTATTTCTGTATAGGGAGCATATCTATAAGGTTTGcgaccaat
gaagtaaaagcccgaaggactagaatcgaatctttaacctttctcaggca
agaaaaagtgaagccttaaaatatgcgccgtatttttgacgacggattga
atctagcgattcctTTATTTTAGAGtgatatcttttttcaaatttaggtg
taaattttagtttcaatctgtcatttctGTAAAAGCCAGGCGGACCGcgc
taggccgcgcaactttgttaGGATTTGGTAGGCTttaaatcctaccaagg
agattcgattctagctcttcgggcttatacttcgagatgccttggagttt
ttacaagatacttcactaattggtcacttaaagtgatagagatgacgcgt
tctttagaaaaagtaataagattcttttattacatcttaacgaccaacca
aatcaaataagagcttgtaaaaactccagcttgtccctatACTTCATTGT
TTGCGACTCAGACTTGGAGTGTATCAACTGTACACATGAAATGTGAACCT
CTGTGAACCAAATATGAAATTTATAATGTTGCCGTAAGTAaggaagaaaa
gacactttttttattttttgttactgTTAAATTTTTTAAACCATAACTTT
ATATTGGAATATTTTGCTAGATTTTTAGCGCTCAATTTTTTGGAGTAATA
TTTTCTAAGCAGTgtgtattttattttctaattacATACCTATAATAGat
aaatttttaaagttaatTTATTCAAGAATCATGAC
Run BLAST on NCBI

transcript from alignment at scaffold_273:80009..93876+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056348 ID=TCONS_00056348|Name=TCONS_00056348|organism=Clytia hemisphaerica|type=transcript|length=13868bp|location=Sequence derived from alignment at scaffold_273:80009..93876+ (Clytia hemisphaerica)
GATCGGATTTACAACAGGGcggcactttcactttcacttttcgataaaaa
agtgaccaaaaaactgcaaaaaagtTGACTGGTGACAATCTCAATATCAA
TCACTCTCTCATCTCTCACTATCATCAGTGACAGTGTTGCCTGGACTGTT
ATCCCTCGTTATCCCTCTCTCTTCTTGGCGTTTTGTCATTGGTAAGTTTT
TTATGGCGATCTTCTCTCAGCTCAGCACCTCTCAGTATCATATGATCAGA
TTACCGTACCATTGTACCCTCTCAACTCATTGTCATTCGCTGAAGTTGGG
CGTTGACCGGGGTATTATCTAAATACCAACGACAATCCTATCAAAAGGGG
TctaaatatttaatttcttttaaccatattttaaCGGTTTTTTAGAAcgt
gttaaaaatcacttgctccggaccagtatggatttcgtgtaactaacgcc
tggcgcattggcgtaagggtacttacaaagattgtttgattttcagttgg
cgtatagtaataattccagctcagcgtgaatgactccataatccatcgat
ttttagcttccatttggctaaatttgctttcgctcGCTTGCGCTCacgtc
aatttattaattatgttggcgcatgcgcctcttttcccatcttgcaccct
tattgaaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNtattgaaaaattgaatgttggtacaaaagaaattttgct
tggcgtgaggcttgctgcacggaaaaatatctttggcgcaagatttcgtg
gaatccatactgggCTCCGGAAGCGCCGGAAGAGCTCGGGAACTTTCTGG
AGagaaaaatagtattttttgagCTGCTCCGGAAAACTTCGGAAGTTTCT
GGAGCGCCAATAGGGTCCTTTAgagtaaaaataaataatagtcCTCATTC
GTCATTAGGCCTAAAAGGCAAGGCAGTCAGGCCAGGGCCTCCTTGgtctt
ttttaatatttactgtaggatcgtctaatatcgacatgcgtcttctaatA
TAATTTTGATACCGGATttgtaaaattctcaaaacaaaccttgaatgaaa
ttcttggtatcattcttatcgaaaaagtccatccatcaaactagatgtag
aagttcagtaaacattgcaattctttcaataaaaaaaaacagccaaatta
tataaGCAGTTTCACACAACACacaaaacgcatgcaaacttcctcgtaac
tttctcgtgtccatcattaaaattttacaactttatcacgcttcaagtca
cgtgataaaaataatttgcgcgctTAGTCAACCTGGTTTCCCCGTCCGTA
TTGTTTATTGCAAGCACGCGCTCTAGGTGCTAAGAGGCCGCGTTAAACTT
TCTAGGCCCCCCGCACCTAGCACGcccggtcccttttcaaattcaaaagg
aaaccgggttctttaattattttcggttcacggtaaaaaggtctactaaa
aaaatTCCTTGcatgcaaaatgttgttgtgatttgggcatcttcgttgaa
agcatgctaattagttttttagtgattactacatcgttaaagttttcttt
tcaaatataagtaattaACACTTCacttttctcatattatattaacaatc
tgtgacgtgatagggagagtacaatttagtgattgattgataacgttggt
atgtatttgtttatgtttgattttttatttcgaagaccagcctacagcta
tgtcgataTTAGATGATCCTACGGTAGtttggatagaataaaaacatacc
tgatcaacacaaccaaaccttctgtcttgcgtttactctttccttcccaa
taactttcgtttttgcttaaatgtaggttttaaaatccacaactaatgaa
cctcttatagctttatccaAATAAATatggttgaaaaccttctgtcaggt
ttcattccgtacgttttttatccacgtggtgaagcGGTTCCCCTGATTTC
CCGATATtcaaaaattggaactttcccgtgggcgcgattgggcgtttata
ttttttgtgaaaatttaccgtattttaatgctaatataatctagatagga
aagaaatattaaatttgattctttttttgttcgtatttctaaatttcacg
ataaaaagaattatttacaaattattttctttaacaggcgttgaatcgac
attgacatatttaatgatgtcataatcaatgccgtgcatattttgtcagc
gccgtgcatattatgtcaacatccttttcatttggataaataccactaaa
atatacgagagaagtaaacataaatttatcacccgcgagcacggcttagc
taagcacacctctcttattcattatctaagaattggaacgggcaaagatt
accgcgcgggctgatagcggacaaaggttatttgaagatattttcagtta
taatcaaAGGtcgaacaaactaaacatagaaagggggtattttttagtgc
tccaTACGATGATAGCCTAGATATCTAAGCTAGTTTTCAGTCACTTGCTA
TAAAATATGAaagttaagttgtgactgaaatACTGGCTTAGGAGCAGTAG
AACTCGGtgcttatcaactgacaacaacgacaGTTCAAAATTCGCGCGAA
CAGTGACGTAATTACAcataatttgtaaaatttgtataatttatTCGGCC
GaaagtttgaaagtttttttatgaaCAACAGCCTAGAAATATTTCATCAC
ACACaagaataaaaacataacatattgttttgaagaaaaaaaaacacaat
ttgatTGGACACATTAAAAAAAGTGCTGCTCtttgattggttaatttcaA
CTCCAAACAATAAAaccaaaattcttttatttgattacgaaaaaaacaaa
cacttcatcggtttgttttttctctcttcgctattgaaaagtaatacatT
TGTTTTATTTGTGACCCGAGAAGAAGAGTGTGTGTGTAGAATGGAAAATt
gtgtttcttatttttctgaaaaaagactTCTGAGAGAAAAAACGCTCTTT
TGGAGTGAAATATGTTGTGATTTGTTTTGAATGTAAATTCtacaaaaata
ttacaaaacaaaccaaaatacacccaaatataatataaaaattatTACGA
AAAAATCTTTGCTTCAATATATCGAATCTTCATTATATATAGGATCTGCG
ACAATTattgtctttaaaaaattgtttttcaaaaacattttgttaacCCA
AAAACTATATTGCAGCAAAAACCATTAATGTCAtcatcaaataaattttt
ttatcgtTCAACAAACACACATGAAGCTGGAACATTATtccctagcctgg
gaatccaagctgaTAGTTTATGTAATTGTACATACATAGTACAAATAACG
GTTGGCTCTTTCATCTATTAAATTTGACACACAACAGTCGACATTGGGAT
TCAGTCATGACCAAATAACGGAATTCATTCTGAAAAAGACACATGATAGC
TCGAACACTTCTCTCCAAATACATAATCAGGTTTTCAGTTTGTCAGTCAT
TTGGCCCATTTGGTCTCGTTTCTCCATTGGCattgatgaaaatatttaat
ttgcTCCAAGTGTGTTTGTAGTCGAAGATCTCAGCACTCCATTATCACAA
AACTCAAAGTCAAAGCACCAAAAGTTAAATTCAGcttcagaaaaacaaaa
acttttttcacaaaccAGTTTTCCCTTCTcttgtttttttcgaaaataat
taaaaaatcaacaacTTACGAAAAGTTTCGGCTTTTATACCACGTGACCG
CCTCTGACCAATTAGAAGCCACAAAAAAACGACGTTCAGATTCTGAACGT
CTACTGTTCTCAAGCCAGTTATTCAGCGCTAACTTAAATTTCACggatat
aaaaaaatcaagcaCCGAGAACGCTATATCACCTTTATACAGAATCACGC
GCTGTAATATCTGGCTTGATTAATCAGGCTAATACGATgattggtatttt
ttttgaattctatgtttagatttttttacCAAGCCCTGTTGCTATGTACC
GATCGccgcgtaatatcgataaagtgaaaattttgaaaaatattctaatt
aTTGGGGCGTTGCAGTATAATATAGACCTAACtattcatacaaaaattac
cgtcaactgctctaacttgggacgattggccattttcgatttgttcaatc
atttccgatttgttcaatcatttctattacttttcgattaccttcgatca
tattgaatacctttgattgtattgagtactttccagccttcgattttatc
aaatatgtttccagtagcagcgcctcaaaataatctgaaaccatATTTAC
TTCGGCCAATTAAAACACGTGATTCACACGCGAAAACCACTTTCGTCttc
tccgaccaatcagaatgcgtgatatgagttacttgaggaaacccagggTG
AAAGGCACACAAAAGGAAAAAGGTTGGGAAATAGTGgggcttctttttgt
gctttggtttgGTTTAgtcagtttttttggtttttcttaaagatatgtca
taccgtgaagtcgggtaacttgcatcagtggaggctaacatgcatagccc
tcaaatgactgaccaatcaaagcagcaaagtttcaaaacaaatgaactat
gcagctccggtcgcagctctactctaccatttttgtttcgatttaacttt
gtattttaaggacaaGCCAGGTTCAGTGAGGTTCGGTGAattggtggcca
aattgccgtcccatatTTTGTCAGATAGTTCCATATTAGAGCAGTTGAGG
GTacgggaaacacatatttgtaccctatgctgcacgcaagcacttaagct
aaagtctcgcaaaaggacaaaaatcagttttttgaagtttgcaaaaaaac
ccCACTTAGAAGATCAAACAAAtccagtatgtgaatagagcagtaaaaaa
tgcaacttgtctatttttctttctttttgcaaAAGGCCAGGCCTAATTGA
TTGTTTAGTTCAAGTCCTAGAAGCTTTAAAATATGGGTCAGTCGGTCGGT
AGCTAAAATTGTATCGATTAATAAGACAACAAATTACTTTTTCCAATATA
GGTTTCATGGCAACCAGGGCAAACCGTTTTGTAGATCAAATTAGATTTGC
TGATATTTTGGAGTTAGATCCTTTGAAGGAGAGACAAGGAGAGAGCATAG
TGATTTTCTTCGTGTTATTTTTGATAATAAACATGACATTGGGTTTAGGG
CAACAACAGAGTTTGTTAACCAGGTCATCAACAAGTTGTTTACCACGAAT
TCCGAGATAAGGAACTTTAATTTACAACTTTTAACGTCATCAGAAACATC
ATCTGTATCAGTTTTTGATTTCGGTTGCTCAGAAGTagatttttgtactt
tttacaAAATGAGTACAGTCAGGTACAGTAACTAAAGTTTAGGTTAGAAG
AAAATTTAAACCTGATTTCTTTAAATAACTGTTAAAAGGTTCTGGTGTTA
TGTTTTCACAAATTAAAGTACTAGGCTTTAAAATTTTGGGCAGCAAAGGG
ATatcctagcccaattggctacactgttttttagaccaacccattGTAAG
GCGAATCCTCTCTGAGCTACCCATCCAGGATGTTTCATTAATTTGTAATC
AGATCAATTGATACTGAAAGTTGTGAGTGCTCTTTTGACAGATCAAGATG
CTGAGAGGGCGCTAATTGAAAGCGTCAATAGTTGCAAAAAAGAGCCTCAG
GTAGGGGGGGtccaaaaatgactttttttggaaatttttatgtttaacca
tcttttttaaataaatttttcatgctgattccgaatttgaaaTCCATTTT
TCCACATCTCTTACCCCTGGGCGGCTATCGGAGAccccttttttcggaaa
acCACCCAAAACAgctaaaagtcaatttttttaaattgacaatTTTGAAT
AGCTTTCTAGTGATGtgatctttttaaaatcagtttttcatgctgattcc
gaatttgaaaTTCGTTTTGTCACAACTCTCACCCTTGACCTGGTATTGGA
GGCTaaggaaaattgataatttgaaaatgtttgaatttgaatgaaaaNTT
GTTGTGTGTTTTTTCCCAAACGAATTCCAATTAGAGAAAAGCTTTATTTC
GATTGGGATAAAAATGTGatctaaaatatattaaaaaacttACCGCTTAC
AAGACTTCATCTTTCCTGACAAACACCGTAAACAAGCCAAGATTGGTCGC
TCCCCGGGGGTCGCTCTCGCTGGAAGTAAACAANAAGACTTCATCTTTCC
TGACAAACACCGTAAACAAGCCAAGATTGGTCGCTCTCGCTGGAAGTAAA
CAAACACTGTAGTTAGTGTTATAGTTTGGAATGCAAATCTTCCTTTTACA
AACTCTCCTGGTGTTAATTTTCATTGTGGTGCGAAGATTATACCAGATTG
ATTGGAGGGCTTTTCCGAGGGCTTTACAATGTAATAGTCCAGATACACAA
AAGGACGCCCAGAAAAGGAAGGTTTTTGTAAAccctttgataaaaataaa
aggaaggttttaaaaattggaagcaAGCAACACAGTACAGACAGGtctta
taaggaaaaaatcttcCCTTACATTAAAAAGACTTTGTAGTGATCATTCA
CATCCTAAGGAAATATCAAGAATATATGCTTTGCAGCAACAACCATGTTT
CTTTGTCATAAAAAATCCAACCATAAAAACATATAACATCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCGTTTCGccactcgtttccactcgt
ttcaccactcgtttccacccgtttgcaTTCGTTTCCACTAGTTTCCCACC
CGTTTCGGGGTTTAGTATCTACGATGAAAAATATAATGATAACAACTTGT
TTTAGATCaaattttcatgctgattccgaatttcAAATCAGTTTTTGCAT
ATCTCCTACCCCTTGCCTGCTACGGGGTCGGCTACATGAGGTTCTTTATT
CAGATAATATCGCAAAAAAATGTGCAAAAATCGATATTCTTGAAAGGATA
TTTCTGAGCTGTTAGTTCGTCTGTGGCTTTTTGACACTTGGCTAATGTTA
TACATTCGTCGTCATAGTAGGGAGTTTTGAGTACTTTTTTCAATGAGCTA
ATCCTGTGTACTGCTGCTATAAGTTTATCTGCTGAACTAGTCATGAAGCA
AAAATCAACCTGCTTAGAATCTCGTCTAAACTATCTTGAGCTAGTGAACT
CCTTTGAAATACAATGATTCCCTACCCATTTAAACGTTGAAAAGTTGATA
ATTGTTTTTAGGAAGCCTTAATTATTAAGGGTTAAGTTAAAATTAAAACC
ACTAGGCTATACAGATAGCTAATTCATTTttcttgaggaatacagggtta
ATCCATTTTCCTACAGGGTTCATCCATTTTCCTACAGGGTTCAtccattt
tccttgaggaatacagaatttcttcattttccttgaggaatacagggttc
attcgttttccttgaggaatacagggttcatccattttccttgaggaata
caggatTCATTCGTTTTCCTTTAGGAATACAAGGCTCAtccattttcctt
gaggaatacagggttcatgaaatttttcaaataattttaattcaaaCGAG
TAACATTAGAACAGGTTTATAGTGAATAGTGAATCTATTGAAAGCTACCA
ATGTATAAGAAATATAGCCTTATTCTAAAAAGTAACTTCCAAACAAATGG
ACCAACATGAAAGCATTTACAGGGTTGTATCCCTGAAAAGGAGGGACGTT
TTACTACTTGAAAGTTCACAAGATGATTTCATTTCttattaaaacttttt
tctaattgACTAACTTCTCAAAGAACCCTTGTTTGAACAGATAGTCATAT
TTGTAGAAGTCCTTAATTTATTAACCCCAATGATATTGTAATTAAATCAA
CAGCTTAAGGTCTCGTttatttaaaaaagcattagTTCTTCAAATCTATT
CAAGCACTTGCTTCACTTATAGGAAGGATAAAACAATAAAACGCCTTTCG
ATTGGTTCGATAAACAACTATTCAAATGTAGGATTTTTAGATTCTATCCT
GTTTTTAGAGTCTATACATCCTTATGATTTTCAAGGCCTTCCAAACTATG
ATATACGGCTTGTTAAAGCCAATATCAACTTTTGAATGTCAAATGCTGGC
AACCATTGCATTTGGAAGCAGTTTACTCAAGAAGTAAGTAAGTTAGTCAG
TAAGCTcaagatattttttgatttttacaacTTTGATTATATTCTAAGTC
TCAGAAAATTAAAAGCAGCTCAGTCCATAGGGTTGGATCATTGGATAAAG
TGCTCAAAACTCTTTGTAACAAGGAATGTATAACCAGATGTTTTGATAAA
TGGAATCTAAGTACAAGAATCtcctttcaaaaatattgatttttgcaCAT
ATGAAAATCTGATCTAAAACAAGTTgttatcattaaatttttcattcaaa
gttcattcaaattcaaacattttcaaattatcaaTTGTCCTTGGTTTCAA
AGATTTTAGTAAAAAAGCAGCTTCCTATACCCGGTCAAGGGTGACAGCTA
TGACAAAACGAAtttcaaattcggaatcagcatgaaaaattgattttaaa
aagatatcACATCACTAGAAAACTATTCAAAattgtcaatttaaaaaaat
tgacttttagcGGTTTTGGGCGGTTTTCCAAAAAAGGGGTCTCCGGTAGC
CGCCCAAGGGTAAGAGATATGGAAAAACGGATTTCAAATTCGGAATCAcg
tgaaaaattaatttaaaaaatatggcTATGTAAAAATATAACTCAAAAAG
TGTAATTTTGGACCCCCCTCCTACTCAGAGCCTCCTGCAACTAAACCCaa
taagataaaaatataatttatttcCAGACAGGTTTTTgctacaaattttt
ttcttttcaatagacaCTCAGCATCGTCTTTTCTTTACTCTTACTTTAAA
TTATCTATTCTTTTTTATTCCTAGAAAACAAACGACCAAGCAAACATACA
CTCAAGAATGGCTTCAACAAACAAAGAACCGTTACCCACAGATGAGAGAA
AGGTACAACATTCATCCATCGATAGTCGAAACAACTCCTTTGACTCTCTC
TACCCTGATGGCGATGATCATGGTCTGATGGCATCAATCGAAAGTCATGG
CTCGTTATGGAGGCAATATTCCCTTATCAACAAGAAATACCAAGACAATA
TCAAGTCACAAGATCTATGTTTCTGTTGCGACAGTGATTCTTTTCGCCAT
GGAACTTTGAAAACATTATTTCTGCTTGTGGTTGCATTTGGATTAATTTG
CtctttttttgctttgagattATCTGTTTTCTCAACTCAAAGTGTAACTC
TTACAGGAGGTGATCAAAAACTGGTTCCCATCTCCACTTATTTCAATAAA
GGTCTTAAACTAAAGGAGAGTTGTAATCAGGTCACCCAGGAAGGCAGCAA
ATTATATTTGTTACCAGAATCACCACAAATATCAGCAGAACGTAAAATTT
ACACCGAAGCTGTACAATTTCTCATGCCATCTTGGTCTTATCAATATTGG
GGCTTTAGACTCTTGAAAGGAACAGAGCTGACTATTTCAATATGTGCTGA
TCTTCACTTACAGTTTTATCTCATTAAAGGTGAAAGAAAGCTGAAATCAT
GGAAAGAAACGACTCTTTTCAACGATTATGACTTCCAAAGCAATATACGT
CCAAAGGAAAGCTGCTCTAAGAAGGAAAACCTTAAAAGTCACTCAGTACA
AGTTCATGAGAGCgatattttctatattttgttCTCGAGTTCAGTAGGCT
GGCGTTTTTTCACTGAAGTCACTACCGTCTTGCAATTCAACCGAACAGTA
TATGATACGTCACAAAGCTATTATTCTTGCTTACTATCAAATAGTTCTTG
CATTGGAGAACTTCATCATGGTTCAGAGGACATTGCTTTAGTTGAAACAG
AACTAGACATCAATCATCCAACGACTTCATTCAAGAATTACAAAATCTCT
TACGAACCTTTACCGAGAAACGAAttctattttaaattgtttGGTTTTGT
ATATTTGACTGTTGTCTTAGCAACCGTACTGTACTCTGTATGGCGCTTTT
GTGTCACAATCCACGGGAAAGGTCGGAAAGAGCCAGGAACAAGTGAAGAG
CGTAAACCACTGCTCAAAAACACGAAACCGCACTCATACTCGTTGAGGAG
TCACCCAGGCGGTAAAGATCAATGGCTCGTTGTCAACCGCTCAAGTGGAG
AATCAAACGACTTACGTATAGACGAGCGAGAAACATCGTCCGTTCTTGAA
GAATCTGTTTCGCCGTCACGTCATCGTCTTATTACGACGACGTCAAATTA
TTCGACATACAGCAACGAATCTGAACAGTCGTTATTTATGAACAGACGTG
GTACGAACAATGCTGATATGATGCGTGCTATGCAACAAAACATGGAACAA
CAGCAGCTCTTGGATTCTGTCATGACGTCTGCAGGTGTCAGTGCTATTTG
ATTTACTTCTAATCTAACGAATTATCAAAATGCGTAATGTTAAGATTACC
GCCCTAaccgcacgatgggttattttttctcttttgacgccttcaaagag
agcaattaatcgttaattgaattaagagagcaattaatcgttaatcacac
tcttcaacgaggtgccaatgtttacaaaatataGTTTAATGTTCTTTCTT
tcgtttttttgacttttttgaaagttttcgtTCTAATATTTGTGTCGTCA
CAAGCAATTTGAAGTACAAATAAAATGTAACGTTCTCGGACGTTCCATAG
CGTTCATGGAACGTTCCAGATCGTGCTTAATCGTTCTCAAACGTTTCAGA
ACATTCAGTAACGCTTAAGAACGTTGGAACGTTCATGAACGCTCTCGAAC
GATCATATGCGTCAAAAGGTTAATAATGAACTCGATAAGAACGTTCTTGA
ACTTTTTAGAATGTCCCTAAACGTTCCAAGACATTCCTACACTAGTAAAT
AATAGGGAACGCTTAGGAACGTTCAGGAACGTTCAATAACGTTCCATATC
GTTCGTTTTACTGGAACGTatcattttatttgtatttaAAGTTGTTTATG
ATGACAATTTTTGTGCGATAATGATAACCGGTTGTAATGGAGATTCGTAT
TTATACCACCTTCACACGTCATTACATGTTACTTACGGAATCAACCAATA
GAACGAATTCGTTTTGAGTTGGTACGAATGATTGTAAAAGGTATTTCTGT
ATAGGGAGCATATCTATAAGGTTTGcgaccaatgaagtaaaagcccgaag
gactagaatcgaatctttaacctttctcaggcaagaaaaagtgaagcctt
aaaatatgcgccgtatttttgacgacggattgaatctagcgattcctTTA
TTTTAGAGtgatatcttttttcaaatttaggtgtaaattttagtttcaat
ctgtcatttctGTAAAAGCCAGGCGGACCGcgctaggccgcgcaactttg
ttaGGATTTGGTAGGCTttaaatcctaccaaggagattcgattctagctc
ttcgggcttatacttcgagatgccttggagtttttacaagatacttcact
aattggtcacttaaagtgatagagatgacgcgttctttagaaaaagtaat
aagattcttttattacatcttaacgaccaaccaaatcaaataagagcttg
taaaaactccagcttgtccctatACTTCATTGTTTGCGACTCAGACTTGG
AGTGTATCAACTGTACACATGAAATGTGAACCTCTGTGAACCAAATATGA
AATTTATAATGTTGCCGTAAGTAaggaagaaaagacactttttttatttt
ttgttactgTTAAATTTTTTAAACCATAACTTTATATTGGAATATTTTGC
TAGATTTTTAGCGCTCAATTTTTTGGAGTAATATTTTCTAAGCAGTgtgt
attttattttctaattacATACCTATAATAGataaatttttaaagttaat
TTATTCAAGAATCATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035501XLOC_035501Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056348-exon-scaffold_273-1491911889:80009..80199TCONS_00056348-exon-scaffold_273-1491911889:80009..80199Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1510915933:80009..80199TCONS_00056348-exon-scaffold_273-1510915933:80009..80199Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1575043694:80009..80199TCONS_00056348-exon-scaffold_273-1575043694:80009..80199Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1491911889:90833..93876TCONS_00056348-exon-scaffold_273-1491911889:90833..93876Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1510915933:90833..93876TCONS_00056348-exon-scaffold_273-1510915933:90833..93876Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1575043694:90833..93876TCONS_00056348-exon-scaffold_273-1575043694:90833..93876Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_273supercontigscaffold_273:80009..93876 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.56446	6.99949	1.66368	0.82156	4.68227	3.72452	2.87058	3.30857	2.89678	2.80332	2.28043	2.80298	1.15501	1.73788	2.86432	3.34088	2.85174	2.7388	1.77782	0.827929	2.15886	0.594828	12.5139	11.89	1.98148	1.96084	2.04113	0	8.09117	8.11636
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056348 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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