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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056317 ID=TCONS_00056317|Name=TCONS_00056317|organism=Clytia hemisphaerica|type=transcript|length=1686bp
CACGGAATTATACAAATTATTATGTTCTTGATATATTCTCGATTGCTATA
AATGTTGGAACATCACAATTAAAATATTATCACctctaaaataattttga
agGGCCATTGATTGAAGAACctaaaattttcacgttttGATAATAATTCT
TGTTGAGGAATTTTACTGTACTTTTGCTCATGGGGATATGATGAAGACAT
TTTTCACAATGAGTTTGTGCTAActttattattaatttttgacAATGATT
TATCATTATGTATTTGATAGTGTTTGTGTGTCAGCTATGCTTTGTTTACT
CCAATTGGTATTCGGgcgaagaaaaacaacaaacaacaatacATCTTGAT
ACAGAAGAAGCATCCAAACCTATTTCTACGTCATCACCGATCGAATGCAT
TTTGGAATGCCAGAAAACAGTTAAAGAAAGCTATTATGTAGAAAAggaaa
atcaatgtttttgcttgaaaaatgaagatcagAAGATATTCTCGAGGAAG
AAAGCTGAAGGAATATTTTACGCTTCTAAGCGATATCGAAATTGCCAAGA
AATCAAAGATGTATGTCTCAATTGCAAGTCTGGCATTCACACAGTTGAAC
CTGAACGTGATGTATCGACCAAAGTTTTTTGTGATATTGATACAATTAAA
GGTAccaaatacacctttttgatCAACGGTAAACGTCACCCATCATTGAA
ACTTATGGACAAATGGGAAGGTTTTCCTCAAACTTATGGTGTTGGAAAAA
CATATGTTGGAGATGTTCAAGATGAGGTGTTCAGAGCAAATGAAATCATC
ACCTGGGAAAATACTGCAGGACGAAGTGGACCATATCAATGGTTAGGATT
CAGCTCTAGTGTTTTCGCCAATAAACAACTGCATATTGAATTCTGGATTA
AGTTTGTGGCATCTGTTCCAAACCGTTCTAACAATTTTGGGATGAAAGTC
TATGATGTGATTTATAATTCGTGGGTCGATGATTGCCAAAAAGATGAGTG
GTGCAAAGTATCTTTGAATGTCAAGAATCGCAGCTCTGGAGATGGCTTTC
ATGTCATTTTGATCTTTGATTCCATCAATCGAAGACAAGTCGTTCGAATT
ACACATTTCACACTAaccattttgaaataaaaatgttatGCAATCTTGCA
AATGGAGGATACAAGTTGTTTAGCCCCAAGTTTGGTATCCAGAGACACTT
GCaccaatttttgattttactaaTGGACGTGATAAAAAAGTGAACTAAGA
GACTGGGTTTGAGTATTGTGTAGCCCCTTAATGGTATTTTTTAATGTGTC
ATGTCCCTCTGTCTCTCTAGTAGTCACAAAAGTCACACATCGATACTTTA
GCCCATGTAAAGATACAAAATGTTTTATTAGAATCAAAAGAGCACGGAAA
TTCACAATATTTTAACACGATCTGTACCAACCTGTAGTGGAGGAATCAAA
AGGCCGTCTAACATTTGATACAAAAACCTTTTTCCTGTATTTTGGGGCCC
TTTCAATAGCCTGTTACCGACTACAAGTTTTCTGCTGGCTATAAAAAGGT
CTTTAAAATGTTATCCAAAACTTTGATTTTAGAGTCCCCATTCTGTATTA
GATTTTTACTCTGATGATGACCTCTTGTGAGTGAGGTCGAATatatagtt
taaaaaaaaaacaaaaaacaattataaaaAGGAAAG Run BLAST on NCBI protein sequence of TCONS_00056317-protein >TCONS_00056317-protein ID=TCONS_00056317-protein|Name=TCONS_00056317-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MYLIVFVCQLCFVYSNWYSGEEKQQTTIHLDTEEASKPISTSSPIECILE
CQKTVKESYYVEKENQCFCLKNEDQKIFSRKKAEGIFYASKRYRNCQEIK
DVCLNCKSGIHTVEPERDVSTKVFCDIDTIKGTKYTFLINGKRHPSLKLM
DKWEGFPQTYGVGKTYVGDVQDEVFRANEIITWENTAGRSGPYQWLGFSS
SVFANKQLHIEFWIKFVASVPNRSNNFGMKVYDVIYNSWVDDCQKDEWCK
VSLNVKNRSSGDGFHVILIFDSINRRQVVRITHFTLTILK Run BLAST on NCBI transcript from alignment at scaffold_272:185120..199140+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056317 ID=TCONS_00056317|Name=TCONS_00056317|organism=Clytia hemisphaerica|type=transcript|length=14021bp|location=Sequence derived from alignment at scaffold_272:185120..199140+ (Clytia hemisphaerica)
CACGGAATTATACAAATTATTATGTTCTTGATATATTCTCGATTGCTATA
AATGTTGGAACATCACAATTAAAATATTATCACctctaaaataattttga
agGGCCATTGATTGAAGAACctaaaattttcacgttttGATAATAATTCT
TGTTGAGGAATTTTACTGTACTTTTGCTCATGGGGATATGATGAAGACAT
TTTTCACAATGAGTTTGTGCTAActttattattaatttttgacAATGATT
TATCATTATGTATTTGATAGTGTTTGTGTGTCAGCTATGCTTTGTTTACT
CCAATTGGTATTCGGgcgaagaaaaacaacaaacaacaatacATCTTGAT
ACAGAAGAAGCATCCAAACCTATTTCTACGTCATCACCGATCGAATGCAT
TTTGGAATGCCAGAAAACAGTTAAAGAAAGCTATTATGTAGAAAAggaaa
atcaatgtttttgcttgaaaaatgaagatcagAAGATATTCTCGAGGAAG
AAAGCTGAAGGAATATTTTACGCTTCTAAGGTAACtatcctggggggggg
ggggttttgggAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggtatttaggaaaat
ggagggtacggtatgtgccgcccttaagggtattttttttggactaagtc
ccgctaagggtcggaaaaatcagaaaatctaatttcagtctTACTAAGGG
TCGGAGTAAAATTCGaaagaaagatcgaaatttggtcaaaattggtcaaa
tttgtcccaataagggtcgtaaaattcacaacacgtttctttgttttctc
atttttagtcccggtaagggtctaAAGGTCGAAGATCGGGCggcagcccc
ccccccccccccccccccgggggaaccattttttttaaatttaattttgg
gtttctattttttttttctttttatgtccGTAATGGGTTTAAAGGCGCAA
GAGCGGGGggccgcccccccccccccgtcagctcgcaaccctagtccccc
ccccccccccgtcagctcgaaACTCTAGTACCTCCCCCCTGGGGGTAACT
ATATGTCTGAAATTCTACTGTGAGTATCTATGTTTATTTCAGTTTAGCTT
TTTCTGTTCTGAAATTTAACCTGTGAGGACAGATCATAACAATTTTTTGT
ATCACGCATATCTCTCACAtatttagtctgaatcgcagacttctatataa
tatatatatatttcctatataagaaacttttttcgctagaggatgaacAG
AAGCAGGAGAAGCCTATCATATATTgggcttttttttaatacaagcAATG
AGAATCTTTTGCGCTGTCTGTCAGCAATAAAAATAGATTATGAgggaatt
ttgataaaatacttCGAAAAGCTCTTAGATCAAGAGCTTGCATTTTCATA
TCAATGAAGGGTGCCGTAGGGTAGGCTTGGGTAGGGTAGATTATTTTTTA
GCAGATCTTTATTGTCTCTTTTGTGCTCAAATGACTTGAAAGTTTTCtat
gcattttttttcaaatttaaggtCTCTagacatacccaatttttcgattt
taccccaacttaaatggcagtttaaattcattttttcaaaagcagtttgt
tcttaaacatgtcaaagaagcgaaaataTAAGGTTTtatccacagatatc
tgtaaagcccgaagggctagataagcAACTTTAAGccttctccagcaaaa
aaaagtgaagcaaaaatttgactttttgaatttcgtgccaatggatagga
tctagcattttaattgttttcggagcgcgagataaaaaaaagtaggcggc
aaacgctatttcacatctctcaaaccggtgaaattgcatattttagtcac
gtgactttggtaggaaatccttccaaacatAGGCTTCACTTTtggataaa
agccgcaaatctagcccttcgggctttacagatctgtggtttTATCTTcc
aattctgaaattgatttttcactatgaccagagtCAGAGCCCTtagggag
cggtcataaagtatctactagaggggggtggaggatattttgaaaaatcc
aaaaaaaatttcgcaccccctcccctaacctggaaaaaatttttacgcga
aaaagaattcatccagatgcggtacaaagagtattatttgtttgtatgtC
AAAATAAGGTAAGGGAGATAGTTTAGCCCTGTTAAGTTAAAGTATAACAG
GGTTAAGACAATAATCATCAAGTGGTTTTCTCTGAGCttctgtaaaattt
ggaaaaaaatacggcttattttccccagtagtgacctggcttaattttct
gggggtgcaaactatgaaattggcgcccctggtattttttgtccttactC
GCGCCCTCCATTATTAAGTGAAACTAGAAACTGTAAGCAGTATGGTTGAA
AGgaacgcccggaatctttgacttgagtcaagaaacttggaatttgtttt
ttgtaatttgaaatgttaagGTGTTTTGGCATTAGCAGatgctaaggagg
cgcaaccatggtttgtgcCGACAagcgaaaatttcaatatttttcaccac
cattttagctaaaagacactttgttttgacaaatttcttttaagaagtac
tttttcaaaccactctgatgagctgtgagagccactaatctacttccctc
aCCTAGCTCAATGTTAAAAACCAAAAGGGCAAGgtgatgatgcccaaata
atgcCAATATGAAATGTACATATATGCAATAAGATAAATTATGAGTTGTC
GGCCGTAAGGccgaaaaattttggaaatcttcaaacgtaaaactatgaaa
ttagacttcctacattttctcttgagtttCCCAAAAAGAAATTGGAACAC
CCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTCAATACGTGAATCACGCAATCTTTTTTTGCGTGAATGtatgaaa
tttctatttttacccTCAAATAAGCGTATGTAAATTTTCCGAATTTTTCC
TATTCCTAAGTTCTTCAACAATGGCATTCATGGTAgtgaaaactattttt
gaagGATTGATTCAAAAATAcacattttctttcatttctccTTTCCTCTA
GAgtatacaataaaaacattatGTGTGATTTTTCAGCTCTCATTTTATAC
ACTAAAATCCATTCGCTCTAGGTGTGCACTTATCTAAGTTTGCCATTTTT
TGACCAATGCTACTATCATTAAATTTATTAtgtaccgttgaaaagataat
tcagatcACTATaatttcatagaaaaataatgtttttccattcatgtttt
tttgtttttgttttttcatcaGCGATATCGAAATTGCCAAGAAATCAAAG
ATGTATGTCTCAATTGCAAGTCTGGCATTCACACAGTTGAACCTGAACGT
GATGTATCGACCAAAGTTTTTTGTGATATTGATACAATTAAAGGTAAAAC
AAAAGTACAACTCCGGTGAAACCCACTTCAAAAAGTCAGAGATAGATTCA
AATTAGTTGATCATCGGATCTTTAGCCTATCACTGGATCTTTAGATCATT
CCTTATATAGGAACATTAGCCTAAAAGCTAGAAAACTGTCAATGTCTTTC
AAAATGTCTTATGTAGTTTATGCCAAACTTTGACTTAAAGCGCATGCGTA
AGGGCATTATGTTCTAGAGGAAATAACTATTTTTAGTTTACCTTTGTTTG
AGTTTTCTTTTCTCGATAATAGTCTAAAGAACCGATCCGGCTTAAAGAAA
CGATGATTTGCTTATTAGATCTTTTCCCTGACTTTCAATCACCCAAACTA
CTCTTTTAGGTGTAAAAACTTTcccgagcagaaactttcacgaaaaataa
caaaatttacgACATTCTCGTATAACTCCAAATAGGACATAAGTTTGAtg
aggaaaatttaaaaagtcaaaaaaaaaatttactataACTGGCagttttg
aaatctacatccttatacgcttcttttgacgtAAAAATGACCATGACTAA
GGCCCTAAATTTTCTGCACCAAACTTATGTCCTTTTTGTACATGCCACAC
GAGTTtattactttcgcgaattattCGAATTATTTGCGAATATTTTAAAC
ATCTTTTTTACGAACCATCTTAACTGTGACACGAATTTTAGTTTAGTAAA
AAACGCCTTTCATGGCATTTTCCAAACTCTCAAAACCAACTCTCTTTATC
GCTGTTTAGGcctaaaaaaggcaaaaacctCTTCACAGAAACCAGTTGGA
ATCTTCCCATTAGGGGATGTTCGCATCTATCTCTCAAAGCTTCTAATTAT
CACGAGAAACACTAGAAGTTAAGCTAGGTTAATGAacatgatgatttttt
ttactcAGGTAccaaatacacctttttgatCAACGGTAAACGTCACCCAT
CATTGAAACTTATGGACAAATGGGAAGGTTTTCCTCAAACTTATGGTGTT
GGAAAAACATATGTTGGAGATGTTCAAGATGAGGTGTTCAGAGCAAATGA
AATCATCACCTGGGAAAATACTGCAGGACGAAGTGGACCATATCAATGGT
TAGGATTCAGCTCTAGTGTTTTCGCCAATAAACAACTGCATATTGAATTC
TGGATTAAGTTTGTGGCATCTGTTCCAAACCGTTCTAACAATTTTGGGAT
GAAAGTCTATGGTGTGGTTTATAATTCGTGGGTTGATGATTGTCAAAAAG
ATGAGTGGTGCAAAGTATCTTTGAATATCAAGTGTCGCAGCAATGGCTAT
TATGTCATTTTGATCTTTGATTCCATCAATCGAAGACAAGTCGTTCGAAT
TACACATTTCACACTAaccattttgaaataaaaatgttatGCAATCATTG
CAAATGGAGGATACAAGATGTTTAGCCCAAAGGTTGGTATCCAGAGACAC
TTACaccaatttttgattttactaaTGGACGTGATATAATCCATCACAAA
TAAGTGAACTAAGGGACTGTGTTTGAGTATTGTGTAACCCCTTAATGGTC
ATTTTTAATGTTTCATGTCCCTCTTTCTCTCTAGCTGTCGTAAAAGTCAT
GCATCGATATTACAGCCTATGTAAAGATACAAAAtgttcatagcgacagc
tacaTTCCCGGGGGGGGAGGTTACCCAAGATAAGCGGCCTAAAGTACGTC
CAACCTTCTCAAAGTGCACTGTCACTGTCAAAATGAGCAAGGCGGGTAAG
AAATAGTGCACTATGAGGGTGTAAAATCTTTAAATtgtgaccatattttg
cctagAAATAGTCAAAATTTGCCGAAAAACACGCGTAAGatcgttttttt
ttctcttaaatttactcaaatttggatAAATTTTCCCTGCATTTTAAaag
tccgatttcaaaggcctaattttgggctgcaagtaaaatttttttttatt
atttcaaaataattatttaatatATGATTAAGGTATGTATGACATATCTG
AAAGCCAGTAATATTTTTTATCTAATGGTAATAATTTCggttaaatttta
aaaacttaaacaggatataaataaaatctttagaattttaacattaccta
cttcaaagaagttgaAGCCACccattgcttttgaattttgaaagaataAT
TTCGGTACTCTGTTCCCAATGGATTGAACTAGAAAAGCTTCTTGGGATTT
TTCTTTAGAATCTCTTAAACTCATAATCTTAGTTTTTGTACAAATATTga
gaaaaaagttaatttttttcagttatctctAAATTGAGGATGAAAAACTC
GATTAGATATAAAATCCaaagacactttttaagttttttctttGGGGAAT
CAGGTTTAATAACTACGAATCCCGTTTCCAGAAATGCAGTTCGGGTGAAA
CAACGCCTCAATTGTTATTTCACCCTCACTTTCTCCTAGGCTTGATATcc
atttcaccgtctagttttttaatattttgtctctTTGTCCTTTTTCCATC
tagaatttgattttcaatagATTTGTATTGcagtttttttatctttttat
taatTCTCCATTATTTAATAATTTAGCTTTTATTTAATTGTATATTAATT
GCCGTAATTTTTAATATTAACTTTTAACGATCattttaactttaattttc
aattcatttttaatTATGTATAGCCGATGTAAATAAAAACCTtgtcaaaa
aattcatttttatgttgaaaaaggCCTGTAAGGCCGAAATATTTATGAAA
AGTTGTAACAACACTCAATGAAAACAAGAAACATTGGCTCTATATTGACT
TCTAATATCATAGATAATACTAGTAGGGACCTTTAGCATCTAGGAATTTG
AAAAAGTACGACAGGATTGAACAAAAAAAGCCCTTGGGGATTGATATTGG
GATTCTTTTCATGTCAATTTTCTCATGAGAATAGTGAATTTTCATAGGGT
AATTAATAGACGTTTTCAAAAAGGTTCCAAGGGTAgagtttttaactctg
agttttaacgctagactaggaccttaggatctgaggatccaaaagttcaa
aaatgatccagtagggcttgaaatatagcctagaaaccaataaatctctc
acagatcgaaataatcgatgaaatcaagttgaaggcctaaaaattgacat
tcttgctcgaacttcaattttcaaaaaatggtaaattagccaaaagtgcc
aatatattatggcactgattgtagctaAGCACTTGCTTTTTTATGTCTTC
TTCTTTGATATTTCTCTTAGACGAGCTCCGCTTTCTTGGAAAGCTTTTCA
AACGAAATAATAACAAGTGCACAAGGTGATTACTGATCCAACGATGATTA
AGAGACTTCAAAGATACTAAATCATTGTCCAAAACACAAACATGATTACT
TATCGGGGAGAAAAATGTCAGGGAAAAAAAACCTGATGACAGATTGCGTA
TTTTCTGGTCCAGTACGCTGAAGTTCTAAAGACGTGGGCGAAAATATACA
GTTTTTagcgatctttagagcttcagcgtgtcgctttaagaaaactccac
agctgctatcaggttaggggaagtgacgaaaattttgagggggtgacaaA
ATTTTCCCCTGACAAATTTTCCCCCGATATCTTATCACCCTACCAAAATT
TTTACCGggtttttttatccccgacgaAAAactttttcgtgatttttacc
CCTgcccaaaacttttacccagtTTTTTAATCCCTGACCAATATTATCCC
cgattaattttattttattttaacagaaacaagacgacttgaagtcgtaa
atttcgcctaaagtttaaactgtatgggaaaaacaagaagtagagatgga
agctaatctgaaatctactttacatcgagccttgatgaaacaattttata
agaacaacgaggctcaaagtagctaaaaaaataagaccaatttaagaaca
atggttgtttaattcttaagaaTAAATAACTGAAGGGTATCGATGGTCGC
Gatggtatatcaccgtctatcaagagttattgatttgattctcataaagt
atatgcttataagaaagataaatatgctcatattgtgtgccattgcttgt
ttactttgtaaaaactaattaccgaaagttatatcaccatctatcaagag
atattgttttattcttataaagtatatgcttataagaaaataaagaaaaa
atccaatcTGTGAAGCTagagacacaaagatatatgacggaatccaaaga
aaactcgcgaaaatcgtccgtggttatacgagcgtgcaATTTGTAAATCA
AATTtggtgagttcgtccaccgtatcgagtacttcgtaatcgttttctaa
tttttttcctcACCGCCGGCGCCGCCACCGCAGAATACTGACTGTAATAC
TTTCACTATGGCGAAATTAAAAAGGATTTATACTGTAGTTTTCCATTGTA
AACGTTTCCAGGGATGTTTCTTAACAGACAAATAGAATGACTTTCTTTTC
AAACGAGTTCTTTTGCCTAATAAACACAACAAGCAAAGTTAAAACTACaa
tggtttgataaaaaataacaatagtaACACAATGTTATTAGTTTCGGCGT
TTCTTATCAAATATTTCCCTATtataggggaatatttgttaataccgtaa
tttttcttctccaagtctaacgccggttttggtcaatttcgtgagtttat
tgtgcatgagtctctttttaaatcaagctccggcggtaaaaacagtagaa
tgttctttttttgaggcggaagacgtcattttttcGAGAAACGTCCGTGG
AAAATATGCATACGGCACTCTATTTTCCTTACCGATGGGGCAACGAAGCC
GgtttcggaagcgtattgttgatcggaccatactgctttgatTCTAAccg
tcaaaacaaagatggcagcaAAAAATagcagccaattcgattgacttcaa
aatatgccgTTTTTACCCTGAttgccaaatattttgcattcgttgacaaa
aatttggcaaatgtggcaaaatttgagtgccataaatgccaaattaaaaa
gatgtggtgaatctggcattcttggcgtttttggaacttacctccatacg
tGTCCATCAcatgaagctgtgatcttttgattgaaattgtggatttggca
aagttggtgagtatggcaaatttggaagtcaatcgaattggctgtagaca
acaacttttgctctttcgctatttttttttggtttttatgctttaatgag
ttgaattggatcatgatttttgtacgattatCACAAGGAATGATCGATGA
TGAACGTTGTTTATCATtccttcctggatttgatgttttgtttacattct
gttggtttggaatgagagatacaatctcttggtcttggtcttggaaaaac
aggacattttgtcaactttcacaacaaactaacttcaattttgcttgtaa
atttacataaattgtaagaaggcaagtgactgtgaaaAATCTGACCATGG
TATACCTGAAAAATTTCATGcttgcaacatcaaaaaagtttgcacccaat
CAATGTGACAATGCAAcaatggttgatgaactgattagctaaaaatttaa
acatggagcaaaattgactggttaatgattgaatttcccttggtcttttt
atctacaacaatgaattaactggttAGTGATAGTTAGTGAAAACTCTTTG
TCCCGTGGGGAGAATAATTCTGTTGCTGTTAATTTCctgaatttcaaact
ttttttaagctGATANaacagttagtgaaaactcttTGTGGGAAGAATAA
TTCTGTTGCagttaatttcaaactttttttaagctGATAAAGCGGAACAC
CACggccaatatgaagaatgttaacttctgaaattgtttatttcattgaa
tatggatgtaatcaattgaaatcacctcacatgtacaattaaaatttttc
ttgaacttggagatttttttCCTCGCGTGCATTTAAAACCTGGAAAACTT
TAGTCGTGAATTTATTTGGAGATCTTTTTCCGCGttcattttaaacgtgg
aaacttgtgttttgaatttggagattttcttatgtgcatttaaaacgtgg
aaagcttttgtcgtgaacttgatattttcttccacatatgcatttaaaaa
atgaagaaaactcaagtgatttcctggcatgacaactttttttctttcct
gacatttttttggaaattatgattgtttccaagtatggtatgtgatattg
tttgcttttgcagcatgcttttggaaatcataaaatggcttctgttaggg
ggAATTctttcctatcgacattctttcagattatgaaaatgtttcccagt
aaataaaaatgagatttttttctcaaaacctgAAATACTGGCAATTACAt
aaatacatttttgaaattcttaagggcttgtgttgcttgatgttatctga
gatttaaagcactttgaaatcttttgagtacatcaattattttatcattt
gtaaaggaaatatttatctccatctttgcggctcttgtttgtATTTATGG
AATTCATAATATTTCATGGAATATTTATAAAACTGATGCATAGCCCATAT
ATTCAAGCATGAATAAAAAAAGGAGATTTATTCTCAGAAAGAGCTCTGat
taaaatcatcaaagatGGTAAAGTAATCACCTTTtacaaacatttcaaaa
tatattcttTGTTTGAATTTTCGGTGTTACTTTACacggaatttttcaaa
ttattatgTTCTTGATATATTCTCAATTGCTATAGTAAATGTTAGTTCAT
CACAATTAAATATTATCACCTCTAAAATAAATTTGACGAACCATTGATTG
AGGAACCTAAAATGTTCAAGTTTTTGTTATTCTCGTCGAGGATTTTTACT
GTACTTTTGCTTATTGGGATATGGTGAAGACATATTTCACAATGAGTTTG
TACTAACTTTAATAATATCAATTTTTGACACTGATTTATCATTATGCATT
TGATAGTGTTTGTGTGTCAGCATTGCTTTGTTTACTCAAATTGGTATTTG
GgcgaagaaaaacaacaaacaacaacacaTATTGATACAGAAGAAGCATC
CAAACCTATTTCCACTCCATCATCAATCGAATGCATCTTGGAAtgcaaaa
aaacaatgaaaggaAGCTATTATGTCGAAAAggaaaatcaatgtttttgc
ttgaaaaataaagatcagaAGATATTCTCGAAGAAGAAATCTGAAGGAAT
ATTTAAAAGTTCTAAGGTAACTATATGTCTAAAATTCTACTGTCAGTATC
TCTGACTATCTCAGTTTAGCTTTTTCTGTTCTGAAATTTAACCTGTGAGG
ACAGATTTTTTGTATCGCGCATGTCTCTCACAtatttagtctgaatcgca
gacttctatatatactatatatatttcctatataagaaaattttttcgct
agaggatgagcagaagcagGAGAAGCCTATCATATATTgggctttttttt
taatacaagcAATGAGAATCTTTTGCGCTGTCTGTCAGCAATAAAAAACA
GATTATGAggtaattttgataaaatacttCGAAACAGTCTTAGCTAGAGA
GCTTGCATTTTCATATCAATAAAGGGTGCCGTAGGGTAGGGCTTGGGTAG
GGTAGATTATATTTAGCAGATCCTTATTGTCTCTTTTGTGCTCAAATGAC
TTGAAAGTATTctatacatttttttcaaatttaatcacGTCAATACGTGA
ATCTTGCAATCTTTTTTTGCGTGAATGtatgaaatttctatttttacccT
CAAATAAGCGTATGCAAATTTCCCAATTTTTCCTATTCCCAAGTTCTTCA
ACAATGACATTCATGGTactgaaatctatttttaaagGATTGATTCAAAA
ATACACATCCCTGCCTTTTCTCTAGAgtatagaataaaaacattatGTGT
TATTTTTCAGCTCTTATTTTATACACTAAAATCCATTCGCTCTAGGTGTG
CACTTATCTAAGTTTGCCATTTTTTGACCAATgttaccatagtataagaa
agccgcggctttttTATACTATGATGCTTTTTATACTATGATGCTACTTG
TTTTTTCATTAGCGATATCGAAATTGCCAAGAAATCAAGGATGTATGTCT
CAATTGCAAGTCTGGCATTCACACAATTCAACCTGAACGTGATGTATCGA
CCAAAGTTTTTTGTGATATTGATACAATTAAAGGTAAAACAAAAGTACAA
CTCCCATGAAACGCACTTCGAACAGTCAGAGATAGATTCAAATTAGCTGA
TCATCGGATCTTTAGCCTATCACTGGATCTTTAGACCATGTTATATAGGA
AAAATCAGCCTAAAAGCTAGAAAACTAAATCAGGCGGTGGTGTAATTAGG
GCCGacgtaaaaggggccggcgttaaatcagggccggtgttaaaagggcc
gataaggtaactATTTTTAGTTTTCCTTTGATTGAGTTTTCTTTTCTCGA
TTATAGTCGAGAAAAGAACCGATTCGGCTTAAAAAAACGATGATTTGCTT
ATTTGATCTTTTCCCTGACTTTCAATCACTCAAACTACTTTTTTAGGCgt
aaaaactttcgcgagcaggaACTTTCACGAAACATCGCGATATATTTACG
ACATTCTTGTGTAACTCCAAATAGGACATAAGTTTGGCgaggaaaattaa
aaaagccaAGAAAATAATCTTACTAACATGCAGAAATCTACCTCCTTATC
CTACGTTTCTTTTGACGAAAAAATGACTATGACTAAGGCCCCAAGTTCTC
TACGCCAAATATATGTCCATTTTGGACATGCTACTTACACGAGTTTACTT
AGAATTATCGAAGTATTTAAACATCTTTTTGTGAACCATCATAACTATGA
CATGACTTTTAGTTTAGTTAAATtgctaattaaaaaaaaatttcatgtca
ttttCCCAACAACTCTCAATACCAACTCTCTTTACCGCTTCTTGGCCTAA
AAAAACCAGTTGGAATCTTCCCATCAGGGGATGTTCGCATTTATCTCTCA
AAGCTTCTAATTATCACGAGAAACACTAGAGGTGATCGTTAAGCTAGGTG
TAAATGAAGatgatgatttatttttttgtcatacAGGTAccaaatacacc
tttttgatCAACGGTAAACATCACCCATCATTGAAACTTATGGGCCAATG
GGAAGGTTTTCCTCAAACTTATGGTGTTGGAAAAACATATGTCGGGGATG
TTCAAGATGAGGTGTTCAGAACAAATGAAATCATCACCTGGGAAAATACT
GCAGGACGAAGTGGTAGTACACAATGGTTAGGATTCAGCTCTAGTGTTTT
CGCCAATAAACAACTGCATATTGAATTCTGGATTAAGTTTGTGGCATCCG
TTCCAAACCGGTCTAATAATTTTGGGATGAAGGTCTATGATGTGATTTAT
AATTCGTGGGTCGATGATTGCCAAAAAGATGAGTGGTGCAAAGTATCTTT
GAATGTCAAGAATCGCAGCTCTGGAGATGGCTTTCATGTCATTTTGATCT
TTGATTCCATCAATCGAAGACAAGTCGTTCGAATTACACATTTCACACTA
accattttgaaataaaaatgttatGCAATCTTGCAAATGGAGGATACAAG
TTGTTTAGCCCCAAGTTTGGTATCCAGAGACACTTGCaccaatttttgat
tttactaaTGGACGTGATAAAAAAGTGAACTAAGAGACTGGGTTTGAGTA
TTGTGTAGCCCCTTAATGGTATTTTTTAATGTGTCATGTCCCTCTGTCTC
TCTAGTAGTCACAAAAGTCACACATCGATACTTTAGCCCATGTAAAGATA
CAAAATGTTTTATTAGAATCAAAAGAGCACGGAAATTCACAATATTTTAA
CACGATCTGTACCAACCTGTAGTGGAGGAATCAAAAGGCCGTCTAACATT
TGATACAAAAACCTTTTTCCTGTATTTTGGGGCCCTTTCAATAGCCTGTT
ACCGACTACAAGTTTTCTGCTGGCTATAAAAAGGTCTTTAAAATGTTATC
CAAAACTTTGATTTTAGAGTCCCCATTCTGTATTAGATTTTTACTCTGAT
GATGACCTCTTGTGAGTGAGGTCGAATatatagtttaaaaaaaaaacaaa
aaacaattataaaaAGGAAAG Coding sequence (CDS) from alignment at scaffold_272:185120..199140+ >TCONS_00056317 ID=TCONS_00056317|Name=TCONS_00056317|organism=Clytia hemisphaerica|type=CDS|length=3492bp|location=Sequence derived from alignment at scaffold_272:185120..199140+ (Clytia hemisphaerica)
ATGTATTTGATAGTGTTTGTGTGTCAGCTATGCTTTGTTTACTCCAATTG
GTATTCGGgcgaagaaaaacaacaaacaacaatacATCTTGATACAGAAG
AAGCATCCAAACCTATTTCTACGTCATCACCGATCGAATGCATTTTGGAA
TGCCAGAAAACAGTTAAAGAAAGCTATTATGTAGAAAAggaaaatcaatg
tttttgcttgaaaaatgaagatcagAAGATATTCTCGAGGAAGAAAGCTG
AAGGAATATTTTACGCTTCTAAGCGATATCGAAATTGCCAAGAAATCAAA
GATGTATGTCTCAATTGCAAGTCTGGCATTCACACAGTTGAACCTGAACG
TGATGTATCGACCAAAGTTTTTTGTGATATTGATACAATTAAAGGTAcca
aatacacctttttgatCAACGGTAAACGTCACCCATCATTGAAACTTATG
GACAAATGGGAAGGTTTTCCTCAAACTTATGGTGTTGGAAAAACATATGT
TGGAGATGTTCAAGATGAGGTGTTCAGAGCAAATGAAATCATCACCTGGG
AAAATACTGCAGGACGAAGTGGACCATATCAATGGTTAGGATTCAGCTCT
AGTGTTTTCGCCAATAAACAACTGCATATTGAATTCTGGATTAAGTTTGT
GGCATCTGTTCCAAACCGTTCTAACAATTTTGGGATGAAAGTCTATGATG
TGATTTATAATTCGTGGGTCGATGATTGCCAAAAAGATGAGTGGTGCAAA
GTATCTTTGAATGTCAAGAATCGCAGCTCTGGAGATGGCTTTCATGTCAT
TTTGATCTTTGATTCCATCAATCGAAGACAAGTCGTTCGAATTACACATT
TCACACTAaccattttgaaataaATGTATTTGATAGTGTTTGTGTGTCAG
CTATGCTTTGTTTACTCCAATTGGTATTCGGgcgaagaaaaacaacaaac
aacaatacATCTTGATACAGAAGAAGCATCCAAACCTATTTCTACGTCAT
CACCGATCGAATGCATTTTGGAATGCCAGAAAACAGTTAAAGAAAGCTAT
TATGTAGAAAAggaaaatcaatgtttttgcttgaaaaatgaagatcagAA
GATATTCTCGAGGAAGAAAGCTGAAGGAATATTTTACGCTTCTAAGCGAT
ATCGAAATTGCCAAGAAATCAAAGATGTATGTCTCAATTGCAAGTCTGGC
ATTCACACAGTTGAACCTGAACGTGATGTATCGACCAAAGTTTTTTGTGA
TATTGATACAATTAAAGGTAccaaatacacctttttgatCAACGGTAAAC
GTCACCCATCATTGAAACTTATGGACAAATGGGAAGGTTTTCCTCAAACT
TATGGTGTTGGAAAAACATATGTTGGAGATGTTCAAGATGAGGTGTTCAG
AGCAAATGAAATCATCACCTGGGAAAATACTGCAGGACGAAGTGGACCAT
ATCAATGGTTAGGATTCAGCTCTAGTGTTTTCGCCAATAAACAACTGCAT
ATTGAATTCTGGATTAAGTTTGTGGCATCTGTTCCAAACCGTTCTAACAA
TTTTGGGATGAAAGTCTATGATGTGATTTATAATTCGTGGGTCGATGATT
GCCAAAAAGATGAGTGGTGCAAAGTATCTTTGAATGTCAAGAATCGCAGC
TCTGGAGATGGCTTTCATGTCATTTTGATCTTTGATTCCATCAATCGAAG
ACAAGTCGTTCGAATTACACATTTCACACTAaccattttgaaataaATGT
ATTTGATAGTGTTTGTGTGTCAGCTATGCTTTGTTTACTCCAATTGGTAT
TCGGgcgaagaaaaacaacaaacaacaatacATCTTGATACAGAAGAAGC
ATCCAAACCTATTTCTACGTCATCACCGATCGAATGCATTTTGGAATGCC
AGAAAACAGTTAAAGAAAGCTATTATGTAGAAAAggaaaatcaatgtttt
tgcttgaaaaatgaagatcagAAGATATTCTCGAGGAAGAAAGCTGAAGG
AATATTTTACGCTTCTAAGCGATATCGAAATTGCCAAGAAATCAAAGATG
TATGTCTCAATTGCAAGTCTGGCATTCACACAGTTGAACCTGAACGTGAT
GTATCGACCAAAGTTTTTTGTGATATTGATACAATTAAAGGTAccaaata
cacctttttgatCAACGGTAAACGTCACCCATCATTGAAACTTATGGACA
AATGGGAAGGTTTTCCTCAAACTTATGGTGTTGGAAAAACATATGTTGGA
GATGTTCAAGATGAGGTGTTCAGAGCAAATGAAATCATCACCTGGGAAAA
TACTGCAGGACGAAGTGGACCATATCAATGGTTAGGATTCAGCTCTAGTG
TTTTCGCCAATAAACAACTGCATATTGAATTCTGGATTAAGTTTGTGGCA
TCTGTTCCAAACCGTTCTAACAATTTTGGGATGAAAGTCTATGATGTGAT
TTATAATTCGTGGGTCGATGATTGCCAAAAAGATGAGTGGTGCAAAGTAT
CTTTGAATGTCAAGAATCGCAGCTCTGGAGATGGCTTTCATGTCATTTTG
ATCTTTGATTCCATCAATCGAAGACAAGTCGTTCGAATTACACATTTCAC
ACTAaccattttgaaataaATGTATTTGATAGTGTTTGTGTGTCAGCTAT
GCTTTGTTTACTCCAATTGGTATTCGGgcgaagaaaaacaacaaacaaca
atacATCTTGATACAGAAGAAGCATCCAAACCTATTTCTACGTCATCACC
GATCGAATGCATTTTGGAATGCCAGAAAACAGTTAAAGAAAGCTATTATG
TAGAAAAggaaaatcaatgtttttgcttgaaaaatgaagatcagAAGATA
TTCTCGAGGAAGAAAGCTGAAGGAATATTTTACGCTTCTAAGCGATATCG
AAATTGCCAAGAAATCAAAGATGTATGTCTCAATTGCAAGTCTGGCATTC
ACACAGTTGAACCTGAACGTGATGTATCGACCAAAGTTTTTTGTGATATT
GATACAATTAAAGGTAccaaatacacctttttgatCAACGGTAAACGTCA
CCCATCATTGAAACTTATGGACAAATGGGAAGGTTTTCCTCAAACTTATG
GTGTTGGAAAAACATATGTTGGAGATGTTCAAGATGAGGTGTTCAGAGCA
AATGAAATCATCACCTGGGAAAATACTGCAGGACGAAGTGGACCATATCA
ATGGTTAGGATTCAGCTCTAGTGTTTTCGCCAATAAACAACTGCATATTG
AATTCTGGATTAAGTTTGTGGCATCTGTTCCAAACCGTTCTAACAATTTT
GGGATGAAAGTCTATGATGTGATTTATAATTCGTGGGTCGATGATTGCCA
AAAAGATGAGTGGTGCAAAGTATCTTTGAATGTCAAGAATCGCAGCTCTG
GAGATGGCTTTCATGTCATTTTGATCTTTGATTCCATCAATCGAAGACAA
GTCGTTCGAATTACACATTTCACACTAaccattttgaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056317-exon-scaffold_272-1491911889:185120..185649 | TCONS_00056317-exon-scaffold_272-1491911889:185120..185649 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1510915933:185120..185649 | TCONS_00056317-exon-scaffold_272-1510915933:185120..185649 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1575043694:185120..185649 | TCONS_00056317-exon-scaffold_272-1575043694:185120..185649 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1491911889:188842..188962 | TCONS_00056317-exon-scaffold_272-1491911889:188842..188962 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1510915933:188842..188962 | TCONS_00056317-exon-scaffold_272-1510915933:188842..188962 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1575043694:188842..188962 | TCONS_00056317-exon-scaffold_272-1575043694:188842..188962 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1491911889:189878..190173 | TCONS_00056317-exon-scaffold_272-1491911889:189878..190173 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1510915933:189878..190173 | TCONS_00056317-exon-scaffold_272-1510915933:189878..190173 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1575043694:189878..190173 | TCONS_00056317-exon-scaffold_272-1575043694:189878..190173 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1491911889:198402..199140 | TCONS_00056317-exon-scaffold_272-1491911889:198402..199140 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1510915933:198402..199140 | TCONS_00056317-exon-scaffold_272-1510915933:198402..199140 | Clytia hemisphaerica | exon |
| TCONS_00056317-exon-scaffold_272-1575043694:198402..199140 | TCONS_00056317-exon-scaffold_272-1575043694:198402..199140 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_272 | supercontig | scaffold_272:185120..199140 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR014716 | Fibrinogen_a/b/g_C_1 |
Blast
The following BLAST results are available for this feature:
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