TCONS_00056261 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056261
Unique NameTCONS_00056261
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056261 ID=TCONS_00056261|Name=TCONS_00056261|organism=Clytia hemisphaerica|type=transcript|length=303bp
ATATgttttatgatattttaaacAGATCGATGaccaaaaaatgaaagaag
aaacTAACCAACCTTCGTTTCACAATCGtgttgataaaatattgcaaagC
ACTCAAAATACTCGAATCATTGAGGATAGTGAAATAAAGTACCGGAAAAA
TTACCAACATTCTAAAAAACTGGTCATACCAAAACTAAAAGTTCCTTCTA
CATCaacaaagaaaacgaaaaaatccattaaaaaaccaGCTGAAGCATCC
ataaaaatttggagaaaaaattcCTAAAGTGTTTTCTGAGTGAAATGATA
GAA
Run BLAST on NCBI

transcript from alignment at scaffold_27:13213..13515

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056261 ID=TCONS_00056261|Name=TCONS_00056261|organism=Clytia hemisphaerica|type=transcript|length=303bp|location=Sequence derived from alignment at scaffold_27:13213..13515 (Clytia hemisphaerica)
TTCTATCATTTCACTCAGAAAACACTTTAGgaattttttctccaaatttt
tatGGATGCTTCAGCtggttttttaatggattttttcgttttctttgttG
ATGTAGAAGGAACTTTTAGTTTTGGTATGACCAGTTTTTTAGAATGTTGG
TAATTTTTCCGGTACTTTATTTCACTATCCTCAATGATTCGAGTATTTTG
AGTGctttgcaatattttatcaacaCGATTGTGAAACGAAGGTTGGTTAg
tttcttctttcattttttggtCATCGATCTgtttaaaatatcataaaacA
TAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035435XLOC_035435Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056261-exon-scaffold_27-1491911889:13213..13515TCONS_00056261-exon-scaffold_27-1491911889:13213..13515Clytia hemisphaericaexon
TCONS_00056261-exon-scaffold_27-1510915933:13213..13515TCONS_00056261-exon-scaffold_27-1510915933:13213..13515Clytia hemisphaericaexon
TCONS_00056261-exon-scaffold_27-1575043694:13213..13515TCONS_00056261-exon-scaffold_27-1575043694:13213..13515Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:13213..13515 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056261 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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