TCONS_00056253 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056253
Unique NameTCONS_00056253
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1847

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056253 ID=TCONS_00056253|Name=TCONS_00056253|organism=Clytia hemisphaerica|type=transcript|length=1847bp
GGGTTGTTAAAGCATCTTTCAGCTTGTTAAAGGGTTTCACTCTCAGAAAT
GCAAATGTaataaatgttttatttttttatagggGCGTTTGATCGATATT
ATGTTTGGGCGCGTTCTTTTAATTACGCCGAGAAAGACAATTACTTCGAC
ACTAGTTGCATCGCCTTGAATTCTGAAGAATGGCTTGAAAACTGtgaaga
aatgaaaatgaagaaaaccaaAACATCCAACAAATCAAAACAGGATGAGA
ACAACCTTCCAGAACAAGAGGGTGATCGAAAAACTAGCCAATCAGGTGAA
GATGCTGCTCAAAATAAACCAATCACAAACGATCAAGATGATGACGGGGT
AGACATCGATGACAAACTTGATTACGTCAATATTGAATGTCGTTGGTTTC
TCTTGACTGAAGCTCCGAAGATTAATGATGGTTTCAGGAAATTGATCGAA
TCTCATGCCTTTACAGATGTCATGGAGAATATTAAGAAATTGTCCGGATG
AGGGTATTTTTTACGGACGGAATCTGGAGCatctaagaccatgttcgcac
gaNTTAAGAAATTGTCCGGATGAGGGTATTTTTTACGGACGGAATCCGGA
GCATCTacgaccatgttcgcacgtaacggttccgtttcgctctgaaacga
aatgaagccattctattggttagaagtgacataaaacttgaatttaacca
atagaatggtttCATTTCGCTTCGGAGTGGAACGGAACCGTAGCGTCTGA
ACGTAGTCTAAAACAGATCATCTCGTGCACCGTAGGATGGCTAAGCTTTC
TTGTTCCCGGGGAACCGTTCTTTACGCATTTTCGGAATCTTTCCGCTGGT
TTTCCGGGCATCCCGGCAAAAATGCTGCGTACAGATGCGTAAACAACAca
caacggccttgaaattgaTCGTCTTACAAGTTGATACTAATTTTGAACCT
ACCCAGTGTGTCGGTCTTTTTCCATTGTAAAGTGGCAAATTAAACAGTAA
AGTAAGTATGTCtgtgaccgcagtcggaggcgacccgaaggctcctcttt
cgatagctatctacccgaaggtaggggagggcgccactctttctccctgg
atttctccacttacccttgatccttctccacttacccttgatccttctct
tagttgctgagcatcaagcagagaggcatcaagtaccattttgggaatct
ttggtatgacccggctgggggttgaacccacaaccttgcaaaccgtagcc
ggatgctctaccactgtactacggtggctaaacagtagcgtagacaaggt
GGGCGCAAAACTTGTGTAGGAGActcagatttttatgacacactaattat
atttttcatagtatgaatagataattacagtatCACAAACATCTGCTgcc
cctgtctacgctactgttaaAGTTTCCCCGGGAAAATTTAGCCATCCTTC
GGTATTAAACATAACACGATGACCAGCCTTAACTGGAGTTTGTCTGATGA
CGGTTTGAACACCTGTGGGAGATGTATGGACCTAACGTGGGAATTGCATT
GTTTCGCTATCCATTGTTCTAGAAGCATTGATTCTCATTTCTCTTTTGAT
ATTAATTCACTGGCATAAAGCACAAGGATCTACGTttaagtttgaaacaa
taacatTACGTTTCGCACGCCATCTATGGTTGACTTGGCTCTGAACATAT
GACATTATAGTGGTCTTTATACTGAAAAATGCCAAGCTTCTTAATTGTAT
CATATCTTTGTTTTTACGCAGAAaagatttttatgttttatctttttttc
gtctttttttttaagatttattgGTTCCAAAAATAATGACATTTTTC
Run BLAST on NCBI

protein sequence of TCONS_00056253-protein

>TCONS_00056253-protein ID=TCONS_00056253-protein|Name=TCONS_00056253-protein|organism=Clytia hemisphaerica|type=polypeptide|length=145bp
MFYFFIGAFDRYYVWARSFNYAEKDNYFDTSCIALNSEEWLENCEEMKMK
KTKTSNKSKQDENNLPEQEGDRKTSQSGEDAAQNKPITNDQDDDGVDIDD
KLDYVNIECRWFLLTEAPKINDGFRKLIESHAFTDVMENIKKLSG
Run BLAST on NCBI

transcript from alignment at scaffold_27:151460..162617-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056253 ID=TCONS_00056253|Name=TCONS_00056253|organism=Clytia hemisphaerica|type=transcript|length=11158bp|location=Sequence derived from alignment at scaffold_27:151460..162617- (Clytia hemisphaerica)
GGGTTGTTAAAGCATCTTTCAGCTTGTTAAAGGGTTTCACTCTCAGAAAT GCAAATGTAATAAATGTTTTATTTTTTTATAGGGGCGTTTGATCGATATT ATGTTTGGGCGCGTTCTTTTAATTACGCCGAGAAAGGTTTGTCTATTCCC AGCTGGCACACAACGATGTTTCAACGTTCATCTAACGTTATATGGACGTT GTAAACGTTAGATAAACGTCGAAAAAACGTTGTGTGCCAGCTGGGTTGTT CATTTGTTTATATTTTTATTTAATTTCGGTTTGTGATGTCTGGATATCGT TAACGGGCTACTTGGACTACACAATATATTGACGAACAATATTCGACAAT ATGGCTTGCGGACCGTAATGTACGATGTAAACAACTGGTACTCTATTATC AAAAGCAATTTTCTTTCTTTAAACAGTTACCCCATATTGTTGGAATATTA CAAATCGAGCTAACAATATATTGCGAACATTTTTTCCATATATTGCCGGC ACTTAGCAATATATCGTCAATATAATTGCTTGACAACATATTGTGTAGTG TATGTAACCCTTAAGTTAGGCGATCTATTTTTTCAAAATCGTTAGTTCAT ATCTTTCTTTGAAGTTTTGCCATTCTAAAAGTTAATTTAAAGAACAAAGT TTTATTTTAAAATTGAGCAAAAGCTTTCCGATTTAAAATCATCTTCAGTG CTCTATAAATTAATGTATCGATGATTTTTAGGTCATATCTTTCTTCTTTT TGAGTGCAAAAATCTCCTATTCTTCGGGATATTGAAAACAGAATTTTTGT TCCTACCTGGAGGTCCTATAAATTAACCGTTGTCCGTTCGTTGGTTCGTC CGTTCGTTGGTTCGTCCGTTCGTCTATTACAAGTTTTTCTCAAGATTGGC TCGTTAGTTTTGATTTTTGTCACAAAGATGCAAAATAGCTATGCCTAAAA TGTGACAGTGCCCGATTTTTGATGAATATGCTTTTCATTTCTTGAAATTG CCGGAAATAATGCCTGAAAAACTGGTTTTTCTATTTTCTCAAGATTTCAT CATAAGTTTTTTTCTGATATTTTGCACAAAGATGCGTACATAGCAAATGC CAAAAAACATGACCGAGTCCGATTTTCGAGAAAAAAATCTTCTTTTTTTT TACAGTGACCTTTTTACTATGCAATAATATTAATAATAATTAAATATTAA ATTAAAACGTTACAATATATAAATAGCTCAAAATACGTAGATCTAGGAAA TAGAATTTAAAGTTAATAAAAAATTGAAATCACGACACAAATATATATAG TGAAAACTGAATCGCAATCCTGTCGAAATAGCACAACCTTTCGGGTCAGA CCAGCCCCAAAAGTATAAGCAAAAGCAATGGAAAATACGGTGAAAATATT AAAAACAAGAACTATGAGAAGCACTAAAATCTATGAAAAGCTAAGATTTC AAAATATTGTTATTAAACAAATCAATTTCATCAAACCTAAGGTTTGGCAT TAAAAATTATTTTCTGTCGGTCAAATGTAAGAAGGTTTCGAATTCTGTTT AAGCTCCAAATTTTTTTTGCATTTTACAAAAAATTGGTCACTGCTAGATA GCTGATAGTGACTCCACCACAAAAGGCTGCTTGTGGCATACCTGTGTACA TCTTGACATCATAAAATTGCTTGGCTTGGTAGTTATCTTTGGTCATTACA ATTTCTCCATTCACGACGATCGTGAATACGTATACTCCCGATCCTTTGTA TCTGTGCCGGAACTCGACGTCGTAATCGTAATTCAACTTTGGCGAATAAA CGCCATACCAGTGGTTCCAGACGCCATCCACTGACGAACTAAGTTCGATA TGTTGATTTCCTTGTTGTTGTTTTAACATGACCAATGGGAGTCTGTGACC ATAGACTACCCCAACTCCGTCACCTAAAAGAATAATATATATTTGGTAAA AGTCAAATTAATTTTCGTCCAACTATCTTCTTTCAAAAGATTGGGTGACA GAGCAGGTTTATACCTTTTGTCCTTATTGGGGCTAATCAGCACTGCGTAC TGCACCCTATTTGGTGACAATAAAAACCTGAAAGAACTTTTCTTATCTGT TCTTATGTATTGTGTTTTCTCGATGAAATGTGATTCTCTTTTATGCCGGC CTTTTGGTACGAAATCGGTAGTCCTTATCATCACTTTAGCATGTCGAAAA ATAATAACCTACATAGGGGTGCAAGATTACTACTATTCAACCAGGGGGTT GGAAATTGTTCCTCTATAAGCCCCAGTCCACAATAAGGTAATTCATGATA TGCACCACTGCAATGACTTCACGAAATTATGTAACTTTTGTTCCTCTATA AGCCCCAGTCCACAATNGGGGGGGTTGGCAAATTAAACCTTTAATTTCAA ACCTTTAAAGAATTGGAGTATTGCACACCATTCGATATTCGTCCATTGGT TGATACGAAATTTGATGTGGACGATGTTCTCTGGTGATAAGACGGGGATG ATACCTCTCAAAACGTTCCCACTCACTTCTTCGTCTGTCATATAAAAAAG TTGAATTACATGTTCATGATATGAACCATTGCAACGTCTTCAACGGACCC AACAGCTGATTGGTTGAAAGTGCCGAATTGACTGATTTTACGTCACTTAC AACCAATCAGCTATTGGGTCTATGATGTAATGTCAGAAGACATTGCAATG GTGCATATCATGAACTATAAATTCGGCTGTCATTACTCTGGAGGGAGGGG GTACCTAGGCAAGTGGAGGGCGCGGCACCTTAAGGGTGCCTTTTTAGACC TGGAAACAGGGACTTCGAAGGTTCGAAAAATCAGAAAACAGTCCTACTGA GTAGGCCGAAAATAGTGGTTTGTTTTGAACATCTTTGAAATGGGCTATTT AAGAAATAGTCTGTACTCCCTATGTTGAGGAGGTGTGACGTCCAGGGTGG TCTGGAAAATAAAAAATCCAGAGTGGTCTGGTTTTTTGAATGATAAAATC CAGGCCTGGTCAGTAAAATCGGGTTGAAAATCCAAGGCAGTCTTGAAAAA TTGGAAAATAATCCAGGGGGTAACCTTTTTTTTAAAAGATCTCCTCAACA TATGGGGTACAAACCTTTTTTGGAATAGCCCAATGTTGGTCAAATTTTTG TTTGGAGGCATTTCTGAAACTGTTAGTCATGTCATGTATATCTCTTGGTA ATGATTTGAACAGCATTGGGCTAGTGTCTGAACGACACTAGGAGAGCGAT ACTCACGCGAGAACAAACCTTATGAGTGCCACGGCACGTCACAATGTCTG TCTAACCTACCCACACTCTTGTATCAGAGTAATGGTACCTAATTCCCCTC ACATAGCATGGGTTGACCAAGTGAATCGTAGAGACACGGTGAGTATCGAA CTCGGGCCTCCCATGTGGGAGTCAAGGATGATAACCACTACTGTATACCA CTACGCCTTTTTGAATATTTTGAAAAGTGTATCTAATTATTTAATTATTT TGAAAAGTGTATAGAATTTTTGACTGAAGATCGTGACGAAAAGTTGCGTG AAACTTTAAGTATCAAACAATTCTTATCTCAACTTCAATTTATTGTGTGA AAAGTGTATCTATANAGGATGATAACCACTATACCACTACGCCTTTTTGA TTATTTTGAAAAGTGTATCTATAAATGTGTTGTATAAAGAATTGTACCCA TACCTTTATCAATGACAACTAATGGGGAGACACCATGGTAATTCTGTGGC ACCTAAAATACAAGGAATTAGGCTTTGATTTCCCAGTTGCAAAAACAAGG TATAATTGCCCCGCAATGGGGCTTTCTGACCTAAGATTGCAACAAAAAAA ATCTTGGACAAAGAAAGAAATGTGAACAAATTTTTTTAACTTTTCCAAAA AGTGTATTGCATCAAACATAACACGCCAAAGAAAGATTTTTTCGGTAGAA ATCTTTTCCTTTCATCTATTTCAAACAAATTTTTATTTATTCTGGCTTAA AAAGCTCGTACATTTTCGACCACACTCGGAGAATAACTATCTACCCGAGA AGTTTTTTTGCTTACCTTTTTAAAGCATTTTTCAGCACCAATTCGAATGA GAGTAAATTTTAAAATACCAATCAGCACCAACAGTTTCCACGGCATCTTG GTCGTATAATTATCGAGACAATTCTAGACGATTCTATCATCTACACGCAT GGTCACTAATTATATTATATAATCTTTTATAAAAGAGAATACACGCTTTT TTTATTAGAATAGTGTACTTTGGATGAGGGTCAAGTATTCTTATGAAAGT GCCAAAATCGAGGATGAAATATTCTTAACGTATTCTTAACGTATTCTTAC TTATACTTGACTTGACTTTTTTACAAACATGAGAGATGATCAATTTGAGA GTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTACATTTCTTCCTCT AAGCCTCAATTTATCTCAAAGGAAGCAGTTTTTTCTGTTAACCAAATACA AAATGACTGTATTCTTAATTGAAATGTGAAATTCACCGTAGAGGGTATTC TTAGGCTATTCTTACCATTTGGCCAATTTTCACCCTGATATTCTTATAGA AGATATTCTTACAAAAAAGCGTGTAATTTAGGAAGAGGGAAAAACAGAAG CCTCCCCCATTGAAGGGGTGAAAGAAAAATGTGCAATTTTGTATTACAGA ATAGATGGACTTCTCATTCACCAAATCGTAAAAATTCTAAAATCAAGATG TTTATATTTTGCTGCCATATAAAGATTGTAGACCAGAGGGGATGTGATGT AAACAAAGATGCAAGCTACCGTTGTAAAATGTGTGAAAACTTTTTAATCT TTTTTTTTGGAACAAATACGAATTTATGTGTTCGAGATAAATCGAGGGGG ACGGTATGAAACAAAGTTGACATGTCTCCAAAATCACCGTCCACTTTGCT CGACGACGGTAAAAACACCAAAATACCGTCGTCTGTTTAGGTGAGCAAAA GCGATATAGAGCCGTACATCAACTATCGACTTTGTTTTGTACCATTTTAC TTACCGTCGCCCTCGATATCCTCCGATACATAAACTCGGTAATACGTCTG GCCCGGGTAGCTTAGTATTATCCTTGTAAATCTAAGGGTTGTGGGTTTGA TTCCCGGTCACTGCTTACTCGGCGAATTAGCAGCTTTGATTGGGTAACCA AATCTAGGCTGTAAGTTACTGGGAGCTGAAAGTAGGTGTATTGCTCCAAC TCAGTATTTGACCTCACAGATCTAGTGCAAATAGAAAAGGGGATAGACTC TCGGCTCCTTCGACATCTACCCGACGGACATACTACTCTTAGGTTCCAAA TAAACGCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCC CCCCCCCCCTTAACCCCCCCCCCCCCCCTTTATTTGGAACCTAAGAGTAC TTGCTTAATAGTAGTATTATGTTAAAGAAAAACACTGGAGTTGTAAATCT CCTATTTATACTTCTTATGAATGACTTTCTACATGCTGGACATACTCTAA CCTTGCTACTTGAAAATTCCTCCCAAATTTTCAAAAGTTTTCTATCCAAA TTCTACATGATAAAACTTCTGGGGCACAAGATATATCGAATCTTCCTATA ATTCGAACGAATTTTCAGTCCCCGTTCAGAAGAAATCTTCCCAAAAAAAA AGCTAAAAATTTTTTTCACCCGTACTTATATCCCTAATTAAAAAATCTAA ATTTATTTCATAGTACAAGCTTTTCGGCTACGTCATCGTCAGTCCAAATA TAGAATGGTAGAAAATCACAAATTTTCTATCAAAAAATGCTGAAAAAATT GCCTAATAATTATCTCAAATAAACAATTTCATTCTTAAAAAAATAGTCCA AATACTCCAAAGCGAAGAAAAAACTCTTTCATTGAAAGTTTTTATCAAGT TATTTGTAAAAGATAAGCCAAAAGAAATATAGAATATTAATTTTTGTAAC CAGAGATTTGAGTATGCTATACATCAATTTTCATTTTAGTCTATGAATAG TGGTTATTGAATAACTAGTTTCTAATAGCATTGATTATTCAAACGGCAAA GTCCCAATAGAACTTTTCAAAAATTACGTCACGAACATCACTTGCCTCGT ATTCAAACAATCACCATGGTGATTATGTCCCTTGATACATTAAATGATTT TTTAATGAATAGAAACTAGTTTTATTAAAATTCGCTGTNTGAAATGAAAA ACACCATTCTTATATAAAAAAAAGCGTGTAGTTTTATTAAAATTCGCTGT GAGTTAATCACCATAGCAACTTTTTCAAAACGAGGCAAGTGATGAGGTAA GCTGTAGTAGTTGTAAAAATTAAGAACAAAAAATTTAATTTTGTGAAGAA ATGTGTCGTAAGAGCCATTTCACAGCTCAGAAATATTAAATAAATTGAAA GATATAGGTCAAAGTTTATCACTAATTAATCATCGCTAACTCATTTTTAA GGGCAGAAACTTTCGTGATTTTCACAAATTTTGCCCTTTTTCGTGAAAGT TTCCGCCAAGTAAGAAATTACACGAGAAATTCGCGAAAGTTTTTTCCGCG AAAAGTACACTTTTTTTGCTATTTATACTCAGTTATCAGTTTTTGTGCAT TTTTATCGCTTTTTTGCCTGTAAAATGAAATAACATTCTAAAATTCGCGA AATTTTGCGTTTTTTCAACCAGGCAGTTTAAGCTGTATCTTTTGACTGAA TAATTTAGCAATTTTATCATATATCACACTCCTCGTTTTCATCGATGAGT ACTCTTCTCCTCAATTACCACATTTATCTTGAAACCAGGGTCGTCTTTTT ATGTGCCTACGTTCGCAGTCATCTAGTGTTCAACTGTGACAACTGGGTTA TAACGGCGGAGCAATTGAGAAAAATTGATTCGCTCTGGTGTTACTTTTTG CGTAGAATGGTTCGTGGTGGGTTTCGTCGACAAGATCCGGACGATGAAGA GAATTTCAGACTTTATTACACTAACAATGAAATTCATGGTATTTGTAAAA CCGAAAATGTTTCGAACTTTGTGCGCATTAAACAGAGAAAATATACATCT CATTTGGTCAGATCTAGTATTTGTATGACCAAAATGTTGTTATTTTAAGA GGACAAATGCAAAAAGCGTGGTTAGAAATACTACCAACACATTGCTTCAA CAGGTCCTCGTGAACATTGGCTTGAATAAACAAAAATTTATAGAATTGTC TAGTAATAGGGCATTTCGAATCGGCAAATTCTGCTTTTTCCCGGACACAC TGTACATCTGAAAGATTACATTTTTTTTTTGAGAGAGCCCTAGACTGGAA TTGGTTGTTATATTATCAAAAGTGATCGATGATATCTAAGAGCTGTTTAC GTTGTGAGTAATGGGACTAGTGTAGTTTTTGGGAGACCCAGAATTCCCGA GTTATTTTTTCCGAGTTAAAAAACCCGAGTTGCGAAAAAAACGAGTTAAC CCGAGTTATGACGTCATTTTTGGAATTTAGTGACGTCATTTTACATCTCA TAACTCGGTTTAATTTGCTTCCTTTAACTTTCCGAGTTCCGAATTTTCTT TCTGGGTCTCAGTTTTTGGTATTTAAAGCTTTCATGCGGTCTGTATAAAC GGCAATCATCAGCCTCAAATAAAATACGTCAAATACATAATTTATCTCTA TTTCATCTTCAGACAATTACTTCGACACTAGTTGCATCGCCTTGAATTCT GAAGAATGGCTTGAAAACTGTGAAGAAATGAAAATGAAGAAAACCAAAAC ATCCAACAGTAATACATATTTTTCATTGGGCTTTTCAAGAATAAAATTTT AACCCCACTGTTGAGGATATTGATTTTGCAAAGTATCGAACCCCCTGGAT ATTCTACTTAATTAGTAAAGACCCCTGGATATCCACTCTTATAAAGATGC TTTAAACCCCCTGGATATCGTATTTTTTACTTGAAAAGACACTTTACCCC TGGATATCGGCTCCCTTGTAGATGTTTAACCCCCTGGATATCCACTTTTG AATAAAAATCGTTAACCCCCTGGATATCTGCTATCCTCAACAGGGGGCAC GGACTATTTCTGGAAAAGCCCATTCTACAAGAACCAGTACAAGTAGGGTC AGTCCGTAAAAAAAAACCTCGGTCTGTAAGCCTTTTGTTTCTTTTCATTG TTTCTTACTTGAACTGCCAAAATATCCAACAGTAATACATATTTTTCATT GGGCTTTTCCAGAATAAAATTTTAACCCCACTGTTGAGGATATTGATTTT TCGAAGTATCGAACCCCCTGGATATCTTACTTTATTAGTAAAGACCCCCT GGATATCCACTCTTAAAAATATGCTCAACCCCCTGGATATCCTCTCTTAT AAAGATGCTTACCCCCTGGATATCGTATTTTTTACTTGAAAAAACACTTT TGAATAAAACTTTTGAATAAAAAATCGTTAACCCCCTGGATATCTGATAT CCGCAACAGGGGGGGGGGGGGGGCACGGACTATTTCTGGAAAAGCCCAAT GAAAATATGTATTACTGTTGGATATTTTGGCAGTTCAAGTAAGAAACAAT GAAAAGAACAAAAGGCTTACAGACCGAGGTTTTTTTTTTACGGACTGACC CTACTTGTACTGGTTCTTGTAGAATGGGCTTTTCTAGAAATAGTCCGTGC CCCCCCCCCCCTTTTGGGGATATAAGAAATTCAGGGGGTTAAGGGTATTT TATTCAAAAGTTTTTTTTAAATGTTTTTTTTTAATTAAAAAAAAACATTT AAAAAAAACTTTTGAAACAAAAATCGTTACCCCCCTGGATATCCGATATC CGCAACAGGGGGGGGGGCACGGACTTTTTCTAGAAAAGCCCATTCTACAA GAACCAGTACAAGTAGGGTCAGTCCGTAAAAAAAAAACCTCGGTCTGTAA GCCTTTTGTTCTTTTCATTGTTTCTTACTTAAACTTGCGTTTGAGAATCG ATAAGATAGGTTCACAATCACAAGAGGAATACTTGGTAACGTGAAAACTG AGCAAATATATTTTTATCATTTGATATTAACAAAGGAAAAAGCTAACAAA AGGTTAAAACAATAAGACTTAATGGTTAAAGGTATTCACTTATGTAAAAA CAAAACCTTTAACCATAAGTATTATTATACCTAGTATACTGTATTGTTGA CAGATTCAAAGATTTTATTAAATTTTATGATTATTTCTAATAGAATCAAA ACAGGATGAGAACAACCTTCCAGAACAAGAGGGTGATCGAAAAACTAGCC AATCAGGTGAAGATGCTGCTCAAAATAAACCAATCACAAACGATCAAGAT GATGACGGGGTAGACATCGATGACAAACTTGATTACGTCAATATTGAATG TCGTTGGTTTCTCTTGACTGAAGCTCCGAAGATTAATGATGGTTTCAGGA AATTGATCGAATCTCATGCCTTTACAGATGTCATGGAGAATATTAAGAAA TTGTCCGGATGAGGGTATTTTTTACGGACGGAATCTGGAGCATCTAAGAC CATGTTCGCACGANTTAAGAAATTGTCCGGATGAGGGTATTTTTTACGGA CGGAATCCGGAGCATCTACGACCATGTTCGCACGTAACGGTTCCGTTTCG CTCTGAAACGAAATGAAGCCATTCTATTGGTTAGAAGTGACATAAAACTT GAATTTAACCAATAGAATGGTTTCATTTCGCTTCGGAGTGGAACGGAACC GTAGCGTCTGAACGTAGTCTAAAACAGATCATCTCGTGCACCGTAGGATG GCTAAGCTTTCTTGTTCCCGGGGAACCGTTCTTTACGCATTTTCGGAATC TTTCCGCTGGTTTTCCGGGCATCCCGGCAAAAATGCTGCGTACAGATGCG TAAACAACACACAACGGCCTTGAAATTGATCGTCTTACAAGTTGATACTA ATTTTGAACCTACCCAGTGTGTCGGTCTTTTTCCATTGTAAAGTGGCAAA TTAAACAGTAAAGTAAGTATGTCTGTGACCGCAGTCGGAGGCGACCCGAA GGCTCCTCTTTCGATAGCTATCTACCCGAAGGTAGGGGAGGGCGCCACTC TTTCTCCCTGGATTTCTCCACTTACCCTTGATCCTTCTCCACTTACCCTT GATCCTTCTCTTAGTTGCTGAGCATCAAGCAGAGAGGCATCAAGTACCAT TTTGGGAATCTTTGGTATGACCCGGCTGGGGGTTGAACCCACAACCTTGC AAACCGTAGCCGGATGCTCTACCACTGTACTACGGTGGCTAAACAGTAGC GTAGACAAGGTGGGCGCAAAACTTGTGTAGGAGACTCAGATTTTTATGAC ACACTAATTATATTTTTCATAGTATGAATAGATAATTACAGTATCACAAA CATCTGCTGCCCCTGTCTACGCTACTGTTAAAGTTTCCCCGGGAAAATTT AGCCATCCTTCGGTATTAAACATAACACGATGACCAGCCTTAACTGGAGT TTGTCTGATGACGGTTTGAACACCTGTGGGAGATGTATGGACCTAACGTG GGAATTGCATTGTTTCGCTATCCATTGTTCTAGAAGCATTGATTCTCATT TCTCTTTTGATATTAATTCACTGGCATAAAGCACAAGGATCTACGTTTAA GTTTGAAACAATAACATTACGTTTCGCACGCCATCTATGGTTGACTTGGC TCTGAACATATGACATTATAGTGGTCTTTATACTGAAAAATGCCAAGCTT CTTAATTGTATCATATCTTTGTTTTTACGCAGAAAAGATTTTTATGTTTT ATCTTTTTTTCGTCTTTTTTTTTAAGATTTATTGGTTCCAAAAATAATGA CATTTTTC

Coding sequence (CDS) from alignment at scaffold_27:151460..162617-

>TCONS_00056253 ID=TCONS_00056253|Name=TCONS_00056253|organism=Clytia hemisphaerica|type=CDS|length=1314bp|location=Sequence derived from alignment at scaffold_27:151460..162617- (Clytia hemisphaerica)
AATCAAAACAGGATGAGAACAACCTTCCAGAACAAGAGGGTGATCGAAAA
ACTAGCCAATCAGGTGAAGATGCTGCTCAAAATAAACCAATCACAAACGA
TCAAGATGATGACGGGGTAGACATCGATGACAAACTTGATTACGTCAATA
TTGAATGTCGTTGGTTTCTCTTGACTGAAGCTCCGAAGATTAATGATGGT
TTCAGGAAATTGATCGAATCTCATGCCTTTACAGATGTCATGGAGAATAT
TAAGAAATTGTCCGGATGAACAATTACTTCGACACTAGTTGCATCGCCTT
GAATTCTGAAGAATGGCTTGAAAACTGTGAAGAAATGAAAATGAAGAAAA
CCAAAACATCCAACAATGTTTTATTTTTTTATAGGGGCGTTTGATCGATA
TTATGTTTGGGCGCGTTCTTTTAATTACGCCGAGAAAGAATCAAAACAGG
ATGAGAACAACCTTCCAGAACAAGAGGGTGATCGAAAAACTAGCCAATCA
GGTGAAGATGCTGCTCAAAATAAACCAATCACAAACGATCAAGATGATGA
CGGGGTAGACATCGATGACAAACTTGATTACGTCAATATTGAATGTCGTT
GGTTTCTCTTGACTGAAGCTCCGAAGATTAATGATGGTTTCAGGAAATTG
ATCGAATCTCATGCCTTTACAGATGTCATGGAGAATATTAAGAAATTGTC
CGGATGAACAATTACTTCGACACTAGTTGCATCGCCTTGAATTCTGAAGA
ATGGCTTGAAAACTGTGAAGAAATGAAAATGAAGAAAACCAAAACATCCA
ACAATGTTTTATTTTTTTATAGGGGCGTTTGATCGATATTATGTTTGGGC
GCGTTCTTTTAATTACGCCGAGAAAGAATCAAAACAGGATGAGAACAACC
TTCCAGAACAAGAGGGTGATCGAAAAACTAGCCAATCAGGTGAAGATGCT
GCTCAAAATAAACCAATCACAAACGATCAAGATGATGACGGGGTAGACAT
CGATGACAAACTTGATTACGTCAATATTGAATGTCGTTGGTTTCTCTTGA
CTGAAGCTCCGAAGATTAATGATGGTTTCAGGAAATTGATCGAATCTCAT
GCCTTTACAGATGTCATGGAGAATATTAAGAAATTGTCCGGATGAACAAT
TACTTCGACACTAGTTGCATCGCCTTGAATTCTGAAGAATGGCTTGAAAA
CTGTGAAGAAATGAAAATGAAGAAAACCAAAACATCCAACAATGTTTTAT
TTTTTTATAGGGGCGTTTGATCGATATTATGTTTGGGCGCGTTCTTTTAA
TTACGCCGAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035432XLOC_035432Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056253-proteinTCONS_00056253-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056253-exon-scaffold_27-1575043694:162482..162617TCONS_00056253-exon-scaffold_27-1575043694:162482..162617Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1575043694:154510..154605TCONS_00056253-exon-scaffold_27-1575043694:154510..154605Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1575043694:151460..153074TCONS_00056253-exon-scaffold_27-1575043694:151460..153074Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1510915933:162482..162617TCONS_00056253-exon-scaffold_27-1510915933:162482..162617Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1510915933:154510..154605TCONS_00056253-exon-scaffold_27-1510915933:154510..154605Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1510915933:151460..153074TCONS_00056253-exon-scaffold_27-1510915933:151460..153074Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1491911889:162482..162617TCONS_00056253-exon-scaffold_27-1491911889:162482..162617Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1491911889:154510..154605TCONS_00056253-exon-scaffold_27-1491911889:154510..154605Clytia hemisphaericaexon
TCONS_00056253-exon-scaffold_27-1491911889:151460..153074TCONS_00056253-exon-scaffold_27-1491911889:151460..153074Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:151460..162617 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.71817 5.95263 8.72239 10.712 19.8054 17.6626 19.2883 21.3444 7.73339 11.4516 6.85108 6.03317 7.86141 6.63932 5.48028 8.03344 11.8234 9.55624 2.96869 6.04514 7.86166 7.44851 8.71398 10.0642 17.4697 16.5679 6.16327 5.26594 6.46864 6.37213
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056253 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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