|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056185 ID=TCONS_00056185|Name=TCONS_00056185|organism=Clytia hemisphaerica|type=transcript|length=1010bp
GTTCAAGAGTGATCTAGCACATGTCTATAACATGCTGAATACAATGATAC
AGTTTTTACCATAAAAACAATACATCGAAGTGGTTTATGTTGCTGTAGCA
TACTACAAGGTGAATCACCATTTTTAAGACGGCAAGATTGAAAATTActa
tttcaaattagaaaaGGCTATAGTGTGTCAGGAGTAGCCTCTGTATCACA
TAAGAGAACTAAGACgaacgttttattttgtttgcattttaaagctttga
taatttcaaagaattctTAAATTTGGTTAACAACTTTAGGCCATAAGATC
CATATGGATACCAAATTCGTAAACACATTTCAGCCAAAGAATCCAAATGG
ATACCTATTGTCAAATGATGACAAGGGGTTTCAACAccaattttttgcca
aaaatggtGTCAATGGGATGAAAGTAGCTtatggtgaaaatttcaaattt
tttgttcaatgcTATCCAATTTTGGCCTATAAAGGGTCAAGTAGCGCACC
AAAGTGGTTCAAAAGGCCAGGGAAAAATTCCTAGATAGATTTGGACCAAA
GCATTTCGTTACCAAATTGATACGACTTGATCTTATTACAAAGAAATATC
AATCTGATTTATATTTTGAAACCTTAGAAACCTTGAGGGGAAAAATGTTG
GCGAGAatcaattttggcgaatttgtcGTTTGCCAAAATTATTTCCTCCA
AATTCAAATGTAATGATCACCCAGCAAAATTGAATCTCAACGTATGTAAT
CCTCTTTCCAATTAGATCAGAATTCTCCTGAAAATACTTTATTCCTCCTC
TATCAGCTAGTTAACTGACAAAATAATGGGGTACGTCAAAACCAGTTGTc
accaaatttgaaaaatttcttattttgctAATTAATTTCATCATATTGTA
TGAAAAATGGAAGCTCTTAGCGAGTTTGAACGGGCTTGAAAGTCCCCGCT
GACCTAGCCTGGAAATCCATActatgatttcttcttctaTATACTGATGA
CGAAATGAAT Run BLAST on NCBI transcript from alignment at scaffold_268:147110..148119 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056185 ID=TCONS_00056185|Name=TCONS_00056185|organism=Clytia hemisphaerica|type=transcript|length=1010bp|location=Sequence derived from alignment at scaffold_268:147110..148119 (Clytia hemisphaerica)
ATTCATTTCGTCATCAGTATAtagaagaagaaatcatagTATGGATTTCC
AGGCTAGGTCAGCGGGGACTTTCAAGCCCGTTCAAACTCGCTAAGAGCTT
CCATTTTTCATACAATATGATGAAATTAATTagcaaaataagaaattttt
caaatttggtgACAACTGGTTTTGACGTACCCCATTATTTTGTCAGTTAA
CTAGCTGATAGAGGAGGAATAAAGTATTTTCAGGAGAATTCTGATCTAAT
TGGAAAGAGGATTACATACGTTGAGATTCAATTTTGCTGGGTGATCATTA
CATTTGAATTTGGAGGAAATAATTTTGGCAAACgacaaattcgccaaaat
tgatTCTCGCCAACATTTTTCCCCTCAAGGTTTCTAAGGTTTCAAAATAT
AAATCAGATTGATATTTCTTTGTAATAAGATCAAGTCGTATCAATTTGGT
AACGAAATGCTTTGGTCCAAATCTATCTAGGAATTTTTCCCTGGCCTTTT
GAACCACTTTGGTGCGCTACTTGACCCTTTATAGGCCAAAATTGGATAgc
attgaacaaaaaatttgaaattttcaccataAGCTACTTTCATCCCATTG
ACaccatttttggcaaaaaattggTGTTGAAACCCCTTGTCATCATTTGA
CAATAGGTATCCATTTGGATTCTTTGGCTGAAATGTGTTTACGAATTTGG
TATCCATATGGATCTTATGGCCTAAAGTTGTTAACCAAATTTAagaattc
tttgaaattatcaaagctttaaaatgcaaacaaaataaaacgttcGTCTT
AGTTCTCTTATGTGATACAGAGGCTACTCCTGACACACTATAGCCttttc
taatttgaaatagTAATTTTCAATCTTGCCGTCTTAAAAATGGTGATTCA
CCTTGTAGTATGCTACAGCAACATAAACCACTTCGATGTATTGTTTTTAT
GGTAAAAACTGTATCATTGTATTCAGCATGTTATAGACATGTGCTAGATC
ACTCTTGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056185-exon-scaffold_268-1491911889:147110..148119 | TCONS_00056185-exon-scaffold_268-1491911889:147110..148119 | Clytia hemisphaerica | exon |
| TCONS_00056185-exon-scaffold_268-1510915933:147110..148119 | TCONS_00056185-exon-scaffold_268-1510915933:147110..148119 | Clytia hemisphaerica | exon |
| TCONS_00056185-exon-scaffold_268-1575043694:147110..148119 | TCONS_00056185-exon-scaffold_268-1575043694:147110..148119 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_268 | supercontig | scaffold_268:147110..148119 . |
Blast
The following BLAST results are available for this feature:
|
