TCONS_00056156 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056156
Unique NameTCONS_00056156
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1105

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056156 ID=TCONS_00056156|Name=TCONS_00056156|organism=Clytia hemisphaerica|type=transcript|length=1105bp
TTGGTGCTCCCTCACTTTCAAGCTCCAATCAATATTTTGATGTgtttaaa
tgataaaaaataatacAGAATCTAAGAATGGATATCAAATAAGAACCGTA
CAATTGGTTAAGAAGAGATTGGTTCGAACAATGTGGGGGGATTCTCGTGG
TATCAAATAGTTTCCGATTCTTCCGACGCAACCCGGGAATGAATCCCGAT
TCTGACAGCATAAAATGGGTCATAACCAAAGATGATTACAGCACAGCAAG
TATCCTCAATGAAATCCAAAAACTACCCGAACCCAAATATTCGGCATTTG
GCGAACGTATCCGCCATGTTGCGCCCACCGCCATGCAATGCTCCATGTTT
TGTGGTGGCAAACAATGTAAATATTGTAACCCTGCCAGGTTCAAGAAAGA
ACCCAATCAAGATGCTATAAATGGGCTATACTCTGCTTGggtgacgtcaa
atattttggCCACTTCCCGACCTTCCACCACTGCTATAAAACAATACAAC
ATCATCGAACagtttcaaaaGAAGGAAATTCGTTCCATCATCAACTTACA
ACATCCAGGCGAACATGCAGCCTGTGGTTTTGGATTGGAGGCTGGTGGAT
TCACCTACGTCCCTCAAGACTTCATGGATAATGATGtatttttctaCAAT
TTTGGATGGAACGACTATGGCGTCCGATCTTTGCAGTCTATTTTGGATAT
GGTCAAAGTATTCGACTTCGCGTTATCCAAGGGGAAAGCGGCTGTTCACT
GTCATGCTGGacttgggcggacgggcgttctCATAGCATGCTACTTGATT
TATTCCATGAGACTAACCTCGCATGAAGCCATTATGAAAGTGAGAGAAGC
ACGGTAAGCTTGGTCGTTCAAAGCCAATACTTGGAAAGAAATTCGACACT
ATTCTGAGATCCGATTGATTAGTGATTTGAAttgaaataaaccagccgag
gctggaaggtcagccaatagagcttagctagatagctttaataagtgcgt
taacagatgtaagagatgtactgaaacagagtagactaaaaatgttgaat
aatgtacaaaatgtgaaacatttgataacttgatttaaaattatttaaaa
caagc
Run BLAST on NCBI

transcript from alignment at scaffold_268:180823..198766+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056156 ID=TCONS_00056156|Name=TCONS_00056156|organism=Clytia hemisphaerica|type=transcript|length=17944bp|location=Sequence derived from alignment at scaffold_268:180823..198766+ (Clytia hemisphaerica)
TTGGTGCTCCCTCACTTTCAAGCTCCAATCAATATTTTGATGGTGAGTGC
TTCTTTTAAGCTTGAATAGATTAATTGTTGGATAAAAAAGATCTGTACTA
TCCAATACAGATTCTATGCAAAACTACAATGGCCGCCGGCCCAGAACGAC
CACCCACGgcttggcccgaacatgttcgggcctcttgattaattAGGATA
CTAAAAACCAAAATACCTGTATTTTTCACCCAACTTGAGACATCCGCGCC
ACCTTACCACTTCCAAGATGAAAATGGCTCTGAACAGCAGATTATCAAGG
ATGTTAATTTTCGAGGAACCCGCCAgagaaattacttgaaattttggtca
gtgGTGCAAATCTTGATGAAGAAAAGGTTTGCATAGTTTTCCAAACGCGG
ATCGAAGCAGTAACCTCAAAATTTCAGGTCAAAGTGTCTGCTCTCCTATT
TAGGATACCTAGATCTCCAAATTAGGATACAACTCCTGTAAGTAGGAGAG
ATTGCCGAcaggtatcctaatttgcacttgttcCTGACTGCCCAAATGAG
GTCATTTTTCCCAATTGTTCCCAATTTAcgccaattttcaagcctttccc
agccttttaaaggcttcggagCACCGATGGAGGGGGATTActttgaggga
gagcaaggcagagggtatctGAAGGGGTCCCAAGGACTATGGGGGCTTTG
gagggctgtagaggcctcaatttttcctggtgagaaaggggtgtagcaGC
CTCAATTGAGGAagtcatttttggcaatttttgccggcttttgacagCAC
TTAGAGGAATTTTGAAgaacccccaacggtgcagacgtgtactctcacat
cccccctgaccagtgagcaccgatcgGACCCCCGgcacaccggccgggac
ccccaggggccgtcggcggtggtacccaaaggaggtcattctttctaatt
ttgaccaattttcaagcctttccaccTTTCCAAGCCCTTTAatttaaagg
cttcggatgactgatggagggtgctggctttgagggaaagcaaggcagag
ggtatccaAAGCAGTGCACCAGCCAAAGGGGtccgaagggctgtggtagg
ctgtggggGGCTGTAGAGGCCTCGATTGGTCCCGCCGGGgctggtaccca
aaggaggtcatttttcccaatttttgcTGGCTTTTGACGGCACTtagagg
aactttgaaggacctcCAAGCGATGCAGaggtgtaccctcacatccccct
gaccagtgggcaccaatCGGACCCCCGGAACCTCGGCcaggacccccagg
ggccgtccacggtagtacccaaaggaggtcattttttattgtcaaacttt
ttcaaacagagttttttgtcgaatttgtcgaacctTTCTTCTTGTTGTCA
AACTTTATCGAACGGagtttttgttgtatttgtcgaacatttctcgttgt
cgaactttgtcgaacttaatacgttttgtcgaacttaatcgaatactcac
tattttagcgacttttgaaaataagtttgattaaagaatttaatcgaact
tttgtcgttcgattaagttcaacaaagttcgattagttcggtaatcgaac
tgttCAATTAATTACAtctggcccagaaggctcacaaGACACTATGCGCA
CTTCCGAGTTTTTTTGTgacgacactgcgcacttctaaaaatattttaga
gatAAAAAGTCCCCCTCAAAAGATAGCCattctggtcagcaaaatagata
cTGAGTTGTAATAAATGAGTTGATGATAATAGCGAAATCATTTGTGGTTT
TACGAGTTGTAAATCTGGCCTGTGATTTATATATAACAACATTTTTACAC
TTGAGCGCTTAACTCAGAAATTTTAACCTGCAACTCTTGATATGAACAAC
TTAGAAATATTAACTTGTTTTGCGTAACTCGATGTTCATTTTAAAGacca
aaaaaatttcattgcgCGGGCCCCGCTCGCTTGGAAATTTCCCGCCATGa
caaaaaagtcagaagtgcgcagcgtcacttgagccttctgggccattgac
cctagacagttctagttcacaaattttataagaactggaagtgcgtgaaa
actagaagtgcgtgctctgagccttctgggccattgaccctagacagttc
tagttcacaaattttataagaactggaagtgcgtgaaaactagaagtgcg
tgctctgagccttctgggccattgtACAAAACACGCGCTTTTACCCAGAC
GGTGCTAATCGAACGTTCAATTTTGATTGAAGGTGGATGCATGCAGGATG
GTTGTCTGCTAAGAAGACTAGGTTGTCTTCTCACCCATAGTCATAGATCA
TCTTGGTaagttgttcttcaaattagtttttgagGTTGGCtggttcaaat
tttttcatctatggctttaaatttaggtaatttttcatagttttatcTAT
AGGCTAGGCAAAGGGAAGTTTACGTATTAGTTTACCGTTACAATGAATTC
ATAATTTGAtgcggcaaaatttcattattcattattcattattttaccAT
AAACTCTCCCACGCAAACAATCGAATATAAACAGCAGTAGAACGTCTTCA
TTTTGTACCGACGCGCGCTCGTATTCTTTGACTTTGTTTCAAATTGGGCA
Gtcagtcacactagcgtcccccaaaatgtgtatcaaagattaatgctgcg
aaacgcgatatcgtttacttgactctcaagcaaaaaaatgcgccgcaaaa
cttctaaaggaattcatgaaaaaataacccggcacttttaaatgaaatta
atgttctcaaaaactatgagaaattgcctaaaatttgagccatagatgaa
ataatttgagccaagccttaaccttgagaactaatttgaagatcaacttc
ccaagaaaaagatctacggaggagacggaacccacctagatccgcgcact
gtcggataggctatttcccggaaattttgccggacctcaaactctgaccc
atttacatgtgcggaattgtttttactttagcgtataaactaggccttaa
aaatcgaagcactgtctcgggaattgaatgacaaattttggttggttgat
tttggctgctgcacgttttattttgtttcaaactttcaagttttaattaa
ttgtcttgcgaacttgattcaggtaactctcatccttgctgttgcaaata
catcctgtagatgactgatgttgttttttctgaaagctagatttcctagt
gtgactaactgttggGCGCGCAAGTGGCAATGATACATTGTATCCTTTGT
TTCACATTGGGCGCGTGAGTGGCAATAATACAATACAAAGCGTGTGGATG
AAATCAGTTGTGTGAAGGCTTTGGGAGATTCTTGCCGTTTAGAGTCATTG
GTAAGTCATGTATTGATGTTTTTGatatttggactgaaaaaaatagaaat
aatgaaaatttttataaaataatgaaaatttttatgcgGTAGCTCAAACA
CACGCGGGCGGGTAACGGTAAACTAATACCTGACTTCCCTTCGCCATAGT
GTTAAAGCGccagtttattttttcatacactttagaagttttgcggcgcc
aTTTTTTGCTCACAAGTCAAGTAATTATTAAAGCGCTTCCGCAACATTAA
TCTTTGATTTGCAATTCGGTAGGGCGCGATCGTAATGGGCCATTGACAAA
AGAAAATCCTTTTTCTTAAACAGActctgaccccctccccccttcctctt
aatggccaaaaaattcttgaaaaaaataaacttttaaaggCCTGAAATTA
CTTTTCTCCTATATGTTCTTTTgcattctttttctttgttaacATTGAAA
TGCTTctttatttccacgggaaaatATGTGGTTTTGAGCTGTAACCTTAG
GATCTCACCCGAGGCGAGTCAGGGCGGAATAGGAATCGCGGCTGTTACCA
TGAGGGAGGGGGAGTGTATTGCTGAATTGGGTCATGTGACGAATTATATT
TCTGGATATACGATTGAAAAGTATGGTGGAAGTGATGGATTGTATGGTTT
CTTAGTATTTTTTAAGACTTTGAGACACTGCAAGGAGCTTATTGTAAGTG
agattttccttcttttttgactaattttgacGGCATAAACgttgaccccc
tccccccccttaCGGCCTGAAGCTGTTAAAAAAAGGATTGTCTATTGCCG
ACGGCCCCTAAATTGAATTCTCACTTGACTAAGAATTATGGTGTTTTCCT
CAaccattttcgatttgtttGATAATTTCGATTACTTTCCGATCATATTG
AATGGTGGAATCTGAAACCAATGAAAACAGGGATTATTTGTCAATTTGTT
GTGTCAACTTAACAGCATTGTATTGATACAAAGGCAAAGATGAAAGGGGT
AAGATTAACCTAGTTTTTAATtctgatataggagtttttaAAGACGTAAA
TATTTAGACTGTCTGGTTTTACCAAAGACCTGATCATAaatcaaaatgat
aaatttGTTGGGTGTCTGGAAGAGAAGAGTGTGTGAAGGAGAGCAGAATT
CTGTTGAgctttttaaatattggaatagcCATTTGGGAAGGCCCACCAGA
TTTTTTGAATAACTACCGTGAAATCAGGTAACttcatcagtggagggaaa
cttgcatagccatcaaatgcctaaccaatcaaagcagcaaaatttcaaaa
caaatgtaaCAGTGCaagaactacgcagctccatCATTTTTCCGCccaag
tttttttttgacaaattactCACTGACAGAATTGCAGGTAAATAAAACAG
TGTTGTTGCAGGTTGTtggataataaaaaatcatgcaaaatcacaaattt
taagATAGCGGGAATTCAAATGTTTCTTTGTGACTGCTGAACGTGTAATC
TCAAATTCAAACATATTTAGGTATGGCATGCTTCACTTATGATTAggaga
tatatatatatatagtcaagaagtataaaaccttcaactacttaaaatgg
aaacaataaagacaaaactcacaaaacaaaaagacaatataaatacaaca
aaaatctagaatgaacattcacagaaaatcaatcaggttggaattgaaaa
ggaaaaaatgatGACATAGACATCCATCAGtgcaaaactagtgatctaaa
gtgACTACAAGGAACAAAgcgactcaatatgagttaagatggaaagaagt
aactcaatatgagtcaaaaaatatttcaagaaaacacattatctgttcct
cagttttcgacctacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNgtgaaaatatcctcctatatgatggaaatagggt
tgtgtaggtaggccaagcagtgttaattagacaccaccacagataaaaag
atgtaaaaagatgtgtttaaTGAAAGTATGAAACGCGCTCAAATAGAAAA
TAAACTAAGACTTAAAATccacggaaccagccgaagaaactaaaataaca
atgaaaaaagaagtgtactttctactagacaaagttgccacacctttgac
acgtttctgccacaacgttgtagaaagcatactagatgggaaggaactgg
gattggatcgccactatccaaccctggggctctcacacacattttacagt
tcaaagaagaagatggaaagagtgggaaaagaatgggaattaaaaaaaaa
aaagtcggACTAGAACCCGGTTCAAAGCCCTGTACACccgtgaccgctca
ccgcaaAAGCTGGCGAACGACTGAATTTTGAGaaagttgaaatcttgaaa
attctgaaatatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA
TCCCGTCGTTGATGGAAATATCtaggtttaaaaaagaagcatgaGATCCA
GAATGTTCAATTTTGAGTTCAAGTTCATCTGGATAGATTTCTCCATACAC
ATATTANTTGGGGGTGGTGCCgaacactaaaactagcacttttggtgtag
taagtgcttatattttaattctttttaaagaactttcaaaatttttcaca
aaaatttttttatgaaaaaattctttgttaaaaaaaatatttttgttaga
tggacgaaaaaaaaNTCTTTGTTGAATGAAAATGGCGAGCTTTAACCTTA
TCTTCCTCGATGAGCTTGCTCATGTACCGTTGTTCATATTGGTAGAGGAA
GAGATTATCCCAAAACGGTGCTGGATCAATTCTCATGGGAATTCCTATCA
CCTGACACATAATAATGTCACCTGccttgaaaaaacaatttttaataagA
TGCTTCATAGCTGTCTTCAACGAATTTTGAGTAAAGGACACAAAAGATTT
GGGACCAGTATGCTTTATCATTTTTCGAAATAGCGATGTATTTGCAATTG
CCagcatcaaaaacaaaatcaatgacTTCTGAAAGTTCTTTAATCAGCTT
GTCAAGAGGAATCTTTGTACAATGTACTAAAATCAAAGGTTGAAATTGAT
TTAGCATTCTTCTTTNtgtttttgatgatatcactcaaaaacaggggtgg
tacctggaaatcttttctgaaaacagttactaccaaggtgtagtaactgc
aaagggtggtggtccttgaaaaaagtgttgaaaaagcacttactacacat
catgtcttgtagtaactgcgtgccctcCCCCCCTGGGAAGATCCAAGTCC
TTCTCAGAAACAGCAAGACGAAGGCGTTTAgaaaaaccaacattttcaTT
TACAATTTCTGCCTTACCTCGATCAATCCTAACGTATGTTTCATTTCCTG
TACCCAATATCCCAATCTCCTTCAAAATCACTTCAATATAAAAACGTTTA
CGAATAAATGCAACGTTATTAGCAGCTTTATCAATGGgaacaataacaaa
atttgtGTGAAGTTCATTTAAATAGTCAATGACATCTTTTCTCTTGAGCA
CTGAGcttacttttttgtacttgGTCTTCTTTTTCAGGGATATATATATA
TCATCCTGAgcatgttgtgttgttgtgtcctcttgttggtattgttttgt
ctctttttgtctattacattttttgaatagttgaaggttcaatacttctt
tgactatatataaataatatatatttgtatcttaatgaccagccaggtct
ttacTTTCTTTGCATGTTACTTGGCCTCCACTGATACTCAATCTCACCAT
AATTACTCCAGCAGAAATCTTTTTAGTGATAACGTCATCTTATTCTTTTA
TCGTATACAACACAAGATGATTTATCCTGTTTGCAGTGTTTGTACTAACT
TAatgcagggatatgttatagcggagctggataacgcacatttaaaaaag
acttgttctatctctgttcctgacattaaaatttgatatgaaatttaact
tttttaattacaaactcgtgaaatttggatttcctcttagccaatgattc
tgctgctgcatttatcgttcacgattaaaagcttttaattatcaagaggg
tctgtaaaacattggtaaatgacaatttaaaaaaatgaaaaacattgttt
tcattagtaaagttataagaagtttcttctctaagattataaatagtact
ttttaatttgaaataccgcgctacaccgcggggtgcctcactttctaact
gatattttcagatagcaagtcggtctGATTATGGAAGAAATTTCAAGACA
ATTGAAAcgatatttgtcaaaatatttacatcaAAAATTTTTAAAGAGAA
ATCATGAAAGCTTCTCAaattcataacacacgctgataaaaatagatttc
atttacaaggaagcttttggggtatcttctacaaatattattttgatgaa
aagcgggaacatcatagcaaaatatgtgcaaacgtactgcatgaatactt
tgtctgcttcatttttcttataaaaacgNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttctattatcaacagttt
acaatagaaaagacaaagaagcaatccgctaaggaattctcgtccttcat
ccagctccgctataacatatccctgcttAATGCATGTAGAGACGCGTCGC
ATTGTCATAAGTTAATATACGTTATGGCACTATTATATGCAAGGTCTCAT
TTTCACCAAAAATAGTAttgctctccatcgcagtgttcAAGCTGTAAAAA
TCACAGACTGAGGTATTAGGGACTCACAATATAGCACCGAAGTGAACAAA
TTGGCCTTTCGTGGATGAAAGCAGACTCCTGTTGaacttttgaatattga
aacaCATTTAGCACTGTAACAAGTTCtcatttttaccaaaaataatTGCT
CACCATAGTGTTCGAGCTGTAGTCTCATTCTGTCGAATTAGGGATTCACA
ATATTGTCACTgagtgaacaactcggcctTGTGTGGCTACTGGAATAGTA
AAGTTTGTATTTTCGGTTTCAATCAGTTAACACACCTAATGTAATGAATT
GTCAGGCTTAAGGCTACAAAAGAAAATCTCCTTACAAAGTGAACATTTAA
GAGGCCTTTAAAGGAAATTTTCAAGATATTCTAATTTTAGTTGCAATTAA
AACACTTTATAAATTCAGTCTTTTTTCAATAAGAATTCAATAGATTGATT
TTTGACGGttttgagcattttcagaaattgatttttttattcattttagt
ATGACCTTTGATATTGTGGAACAAactcaataaatgacccatcaaaatct
aatttttctttctcaatTGATCATAAAGACACATGGGAACAGTAATATCT
TGTGTGATATCATGTTTTTTTGTTATGGGgctctattttgtttttcaaac
aaaaacgcCAGAAATATGCCAGTTTAACTTCTAATTTGCCTAATATATGG
AGGGGTTTAGACAAGATGGATTGGAGACTTTCTGTCTAAGTTTTGGCCTC
AAATATTGGCTAACCTCTCATAAGTATAAGTTTTGAGGTAAAATTGTTCC
CACCTATACAATCATATTTTCTAGTTATAAGGGCTGTCTGCAACCATAAC
TGTAGGGTGGGAGGGTGTTAAATAAGATTCACATTCAGCTTCAAATCTCT
CGCCAACTTGATCAACAGATCTTTCAATCCACTTCAACATTATGAATATA
ATATAAACCCAAAGCAATGACATTTAGACAAAAAGGGTGGTAGGCGGCCA
CACATTCGCCAGGCCTTGACACTAAGTTGGTTATTAGCTAATTTACTGGT
AAACTATAATTTAACGGGTTAAGACTAAAAACCATTTTTTGGTATCTTCT
AAAGATTTTATTATAAGTGAAAAATTATTCTAAGCGGGAAATACCAGATA
GATACCAGAAATTGGCTATTTTCTTGGTTTTAGTTTAACACTGAAATTTT
TCCTCTTGTATCTTTGTTTATTGCCTGGTAAACATTTATGAATATTAATT
ATTTAATGTTATAATGAATTAGTTTTTGTTGCAGGAAATATCTAGTAATG
CCCAAAGTACAAGATTTACAGTAGCATGGCTTTATTTTCATTACATAAAC
AGCTGATTAAACAGCTGgcaactttgttttgatttattttctttcacgtt
tttgccaaaagctAGAATCTTTTGCCAACTTTTTGCCCTATCCTATTTCT
GAGGTAAATACTCAAATTTTAGTTTGTTGAATCTGATACCCTTCAGGACA
CACTGGTCTCACTGGAAGGTTCATTGCATTATTTACCTTATTATTTATAT
AGTGTTTTTTTAAAAGACGAATTCAGAAAAACTTCTTCTGTTTTGAATTC
TCACTAGTCTAGACATTCAGCAGatttttcttcctttgaaaaatATCACA
AGGAAAGAGAGAGAAAAGTGTTACTTTATTGAAAACATTCTTTACTCATT
TGCTTTAGATATTTTTTCACACCTTATGAGGGACTTTGAAAGTCAGAAAT
TACATGTACCTCTGTATCCTTTGTGGGAAATAATTTAAATTGTGTGTGGT
TTACTtgaatttgtttaatttttaaagagCACTCAAGAAAGAAAACGATG
GATCAATGGCATAAATTTCAACACAGATTTTACAGATTGTGAAACCTTGc
ttattttaaacattttatacAATATATACATGANTTCTAAGCGGGAAATA
CCAGATAGATACCAGAAATTGGCTATTTTCTTGGTTTTAGTTTAACACTG
AAATTTTTCCTCTTGTATCTTTGTTTATTGCCTGGTAAACATTTATGAAT
ATTAATTATTTAATGTTATAATGAATTAGTTTTTGTTGCAGGAAATATCT
AGTAATGCCCAAAGTACAAGATTTACAGTAGCATGGCTTTATTTTCATTA
CATAAACAGCTGATTAAACAGCTGgcaactttgttttgatttattttctt
tcacgtttttgccaaaagctAGAATCTTTTGCCAACTTTTTGCCCTATCC
TATTTCTGAGGTAAATACTCAAATTTTAGTTTGTTGAATCTGATACCCTT
CAGGACACACTGGTCTCACTGGAAGGTTCATTGCATTATTTACCTTATTA
TTTATATAGTGTTTTTTTAAAAGACGAATTCAGAAAAACTTCTTCTGTTT
TGAATTCTCACTAGTCTAGACATTCAGCAGatttttcttcctttgaaaaa
tATCACAAGGAAAGAGAGAGAAAAGTGTTACTTTATTGAAAACATTCTTT
ACTCATTTGCTTTAGATATTTTTTCACACCTTATGAGGGACTTTGAAAGT
CAGAAATTACATGTACCTCTGTATCCTTTGTGGGAAATAATTTAAATTGT
GTGTGGTTTACTtgaatttgtttaatttttaaagagCACTCAAGAAAGAA
AACGATGGATCAATGGCATACATTTTCAACACAGATTTTACAGATTGTGA
AACCTTGcttattttaaacattttatacAATATATACATggatattattt
ttcatttactcTTACTTTTTGAAGCATTTTGTGAATTCTCTGATGGTGTC
GACATGATTGATATTAAAAAACTACTAAAATAATAGTTTTTCTATTTAGA
ATTATCTATCTAATTACTCTTACTTTTTGGTATATAGACTAAAGTgaaat
tctcatttttcttatttttcatcaTCTGGTTTCTATGGGTCaaagttttc
aataaaattatgacctttCAAGAAATGATTTgtttcaaaaaagtatttca
agTATTGGAGAACATTTTGTCAGATTTcacctaaatttatgcttttgGTT
TTGAGGTGTAATTAGTTTTTGAAACCGTTTTTGACTTGTAAATTCCTTCT
TCAGATGTTCCAAATCATTTTAACTACTTTTAGCTACTTTCGAATAGTCG
AGAAGTCGAGATGCTCAAGGTTTTTGACTAATAAAAACTATGCATGATTT
CAACATAAGAAAAAACGCATTTATAGAGATTTGAAATTCATCACATTTTG
ACTTCCAGAAAATAGTTTGGGAGTTTTACTCAAGACCATATTATGAAGAT
ATTTCTGgctaaaaatctcaaatgatTTGATTATCCATTTGTTTAATTGA
TAAAAGAGAAATcataaaagaagaagatttaATCATACTTAAGGATAAAC
TCAATATTGCACAGTCAAGTTTTGTAACCCGTTATCCTTTACGTTAAACG
TTTTAGCACTGGAAATTAATTTTATCAAGTTCATTCCTTTTGTCTTGTCT
TTAAACCAGCTCATTTTCTCTGAATATTGATGACTCAggtaaaagatttt
ttagaaaaaggaaTCTTTTATTGAATGTAAGATAAAATTTGTTTGACTGT
TTGACTTCTATGAGACGTTCTAGCCGGTAGCAATTCATTTGAAATAAAAC
GAGTCTGTGCTTTGCTTTTACTTAGAAAATTTATCATTATTCTGAAGAAA
TGTGTGAAAATTCCTTTAGATATTTTTGAGATCATAAATATTGATTATAC
TTTAGTATAAAGAAGGGGAAAAAATAAAGTCGAGAAATATTTCCTTTTAT
AACACCAtgaaaaattcatgatttttttatggTTCACAAGTAACCATGGA
TTTTCTGAATTCTTGTATGTGAAAACATTGTCAGCCGAACGAACTATTTT
GGTGTTCCTTCATCATTAGTATTCTCTCTTCAAGACTTTCAAAAAAAGGA
AATGTAGAtcattattttatattatttttactttttttaaatattttttt
ctacttCTAATCTTTGGTACAGCTTGATAGAGGATCTTGATCTAAATGTT
ATGTCTTGATTCTTGTACaattgttacactttttctcttgttctattttt
attgataagattTAAAACCCCATAATGACTTATGTGTCACttacttttga
atttaatggCATATCTTTTATTGGTAATTAAAGAACCGTATTGGATGAAG
ATCTTTGTATTCTAAATATTATTCTGGCGTGCAGAATCCCATGAGTCCTT
TGCTTTACTTTTTGTTTATCAACATCATTTTTAGGTGCATATAATTTTTC
GAATGTTATCTTTCCTGCTCCAAATATGATTATGCTCAAAAGGGGAGATT
GAGAGATTGGTAACTCTAGTGTTTACGGTCGAATTCTGTCtgtcttttct
tattttctagGAAGTCGAATGTCTTTAATCAGGTTTTAGTCAGAGATGGA
TGGCTTCAAATACTGATGAATTACAAAGCAGTGtactttttcttctttag
tCTCCTtcgtttatttgaaaaaattgaactacGATCACAAAATGAAAGGT
AGGCTCAGCAAACGGTCATGTTCTTACTTCGAGTTATAAAAAGTTGgttt
caaaaaatgctgatttcttCATGCGTTGACTCCACATGTTTTGTGGTCAA
AATGCTCTAGGGAGCTCACTATTCTTCTTAGAGAAAGGGggaattcaaag
aaaaatgcAGTTTTTAGATAAGAAATGCAGGTGATTTCTActtcttgaaa
atttcttttcttctccCCTGGTTTTATGgtcataaattttattttctatg
aagAAAGTGTTTTTTAGAGCTAGAGAAGTTGTCGAGGTGGTAGATATTTT
TAGTACAATTAGAGAAATCTTGCCATTAGATAAGAAGCTTAGGTTTTCAT
TCGAACATTTTAAGGGAAATATGTCTTTCCTGTGGACATTCAAATAAAAC
TTCAGTGTTTGGAGATGCCACGTTTTTTTTCGGTTAGTTGGAGTAAATGG
TAacgtttttggattttttaaagGGAAATTTTCTTATAAGTTTGTTAATA
CCGCAGGCGTAAGTTTTGCTCAAGAATGTCCGAATAACCTAAAGTGcaag
taaaatttcaaattaaaaatattccCCAGTTGACAGCCACACCactaaaa
taatatataataataaatGAATGCGTGGTATCTAGAGGCTCAAAATCCTT
TATTGAACATTGAAAATTACCATATCTCTCTTTTAGTgtttaaatgataa
aaaataatacAGAATCTAAGAATGGATATCAAATAAGAACCGTACAATTG
GTTAAGAAGAGATTGGTTCGAACAATGTGGGGGGATTCTCGTGGTATCAA
ATAGTTTCCGATTCTTCCGACGCAACCCGGGAATGAATCCCGATTCTGAC
AGCATAAAATGGGTAAGTATATGGAATTTTTATACAGGGTCCAAAAAACT
TGGTCTGTTTTCTTGCATATCTAGTGAACCTGCCCTTTGTTATCCAGGAG
TTTATTTATATCGGAAACAGCATCAAGTCATACCTTCAGTATTTTGTCAC
TGCTTTTAGAGAAATCTACAAAAGACAATCGAGTCCCTTATAGGTTTTCG
TGGAGTTTAGATGCATCTGCAACATTAGTTCTCATTGAAACCATCCAAAG
TAAGTGAACTAACCGAAGGATTATCTTTCTTACCAAAGGTCATAACCAAA
GATGATTACAGCACAGCAAGTATCCTCAATGAAATCCAAAAACTACCCGA
ACCCAAATATTCGGCATTTGGCGAACGTATCCGCCATGTTGCGCCCACCG
CCATGCAATGCTCCATGTTTTGTGGTGGCAAACAATGTAAATATTGTAAC
CCTGCCAGGTTCAAGAAAGAACCCAATCAAGATGCTATAAATGGGCTATA
CTCTGCTTGGTAAGGGTTTATCTCatgtttttatctacaacaaagTGGTT
TATTGGGCTTAATTCCAGTAAAAAAGTTAACCAAACCCCCCTTCCATTTA
TTCTTAAACGTCAAACAATCCCCcttagattttgcaattttctttGCAAA
CTTTTCAGGTACTTCCAtggttttttattttactctGAAAGACCTCCCTT
GAGACTTTATTGTCTTTTGAGAGACCTCCCTTGATTCTCCAGGTTTGAAG
GGGGGGGGCTGAGTGAAAGATATAATAATCTTATCATATGACCTCCTCGG
CACGGGGTACTTTTTATTGCTCAGTTCCTTATATATATTGTTATTGCATT
CTCAATAGTAGGGTTGACAAAAAAGGGTCGTCCTAATTAATTTTTACCTA
TTAGGAATCTTTCTTGTAATAATTAGAGATAAGGTAatattagttacacg
gtcttctcgaggtgggatacgggatatacagggtcagtaaaaaccgtatt
AGTGGCGAGGCTTGCCGAGTTANAGGGTCGTCCTTATTAATTTTTACCTT
TTAGGAATCATTCTTGTAATAATTAGAAATAAGGTAAtctgttatatttt
tctttacaacTTACTGTTTGTATTTTACAGggtgacgtcaaatattttgg
CCACTTCCCGACCTTCCACCACTGCTATAAAACAATACAACATCATCGAA
CagtttcaaaagtaagccctggCTGCAATTCTATCTTTTTGAAGTATTCT
TGTATTTTTCATAACGTCTCGTAACAAATTTCTGCGAAAATTTTAGCACA
TTTTAATCCAACTTTACCTACGTTTTCTTGAGAGTTCAAGGATTATGTTT
TGGACTATTTTTGTTTCTGGGAACACCTGCATGGATTAGTAATGGTCATT
AATAGTGTTGTTCTATTCGAATATGACGTTGTCGTGCAATAATTTCATGT
GTGTAtgttttttacattttcgttagtaaaacatatttttacctcaaaat
ttactTCGAGAAACTATATACTTCTCCCTTCATTTTGCAACAGGAAGGAA
ATTCGTTCCATCATCAACTTACAACATCCAGGCGAACATGCAGCCTGTGG
TTTTGGATTGGAGGCTGGTGGATTCACCTACGTCCCTCAAGACTTCATGG
ATAATGATGGTGAGTATTTTTTTAGTTGAATAAACACACACAAAAACGCT
ATAATAACAAACCTTTGcttatatttgagtattaatTTTATGATTCCCTT
TACTTGCCGATACAAGGGGAAGTCAATGGGCAGAACTGCAATTGGTATTA
TAGTTAATGATCAAAGTGGATTGTTTTTTTCGACAacttatttttataat
taatcgcacgatgggttatttttttcttatttggcacgccctcaacgAGA
GCAAttttaatcgttaattgcatcctgtagagagcaattaatccttaatc
acactcttcaatgccgcgccaatttttacaaaattgattttaatgttttt
tcttacattttttgcatcgaacgttttaattgcattcgaaattaattttg
tgagaaataaaatctataaacaacaataaaagaaagacacagagagaaaa
gaaaaatataaaactctcagtgtaatttctgttatttactttcctaactg
ggaaaaagtagtgaaagccattgtgcgattagctcgtaatcacataatca
ctcgtacaattcgaaaattgcacttgtgaattttttgtttcgaattttcc
tcgtcctttcggactcggaaaattaataacaaaaaaatcactcgtgcaat
tatattcgaattgcactcgttatcatgcgATTACATATATTTTGGCTTCG
GTTGATGTTatagttgactctctctctaattcgacgaaatgattcgatac
gctccattattcgatagtATTGAAAGACACTGTCGACGAGAAACGCTTAT
AAACAATGCtccactattcgatacgctcccttattcgatgaaaatccgat
tccccttgaaaatcgaattagagagcgtcaatcaACCGATCACATAGTTC
GATTTACTGACCCTGTCTGGTTCTTTTGTACTCATGTCAATTTCTTACgc
cattttataattttttatttttttatttttagtatttttctaCAATTTTG
GATGGTAAGTCAATTCAATCCTTCACTTTCgcagaaaatgttttctccAT
TATTTAGCGTCAGAAACTAAATACTTCATCAATTTATTATCTGGAATACT
TCACCAGTGAAGCAAAAAGCCATTAGATAATGTaacctaataaaaaaaac
gtgacAAATTTCTATATTGTCTACTTCTGTACTTTTTACTTTTATATTTC
AACCGaggttttatttaaaaagttacATATTTAATCAACAGGAACGACTA
TGGCGTCCGATCTTTGCAGTCTATTTTGGATATGGTCAAAGTATTCGACT
TCGCGTTATCCAAGGGGAAAGTATGTATTAAATATAGCTCAGGCCTTACA
TATCACAGGTTCCCTTCCTTCTGCTTTTAAACAATTGGTGACATCCTATA
TACACATTTCATGGATCCTGATGTTTGGCTTTAAAAGTTATCCGATCAAA
CTCTGTTGAACTGTCCGAAACGTTAACGATATTTCAAGCCATTTCTTCTA
TCTGCAATCGGCCCAGTTTTAAAACGAGAACTCCAGTATTACTATAATCT
TTTCCTATCTTTATTCATCCTTGTAGGCGGCTGTTCACTGTCATGCTGGa
cttgggcggacgggcgttctCATAGCATGCTACTTGATTTATTCCATGAG
ACTAACCTCGCATGAAGCCATTATGAAAGTGAGAGAAGCACGGTAAGCTT
GGTCGTTCAAAGCCAATACTTGGAAAGAAATTCGACACTATTCTGAGATC
CGATTGATTAGTGATTTGAAttgaaataaaccagccgaggctggaaggtc
agccaatagagcttagctagatagctttaataagtgcgttaacagatgta
agagatgtactgaaacagagtagactaaaaatgttgaataatgtacaaaa
tgtgaaacatttgataacttgatttaaaattatttaaaacaagc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035355XLOC_035355Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056156-exon-scaffold_268-1491911889:180823..180864TCONS_00056156-exon-scaffold_268-1491911889:180823..180864Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:180823..180864TCONS_00056156-exon-scaffold_268-1510915933:180823..180864Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:180823..180864TCONS_00056156-exon-scaffold_268-1575043694:180823..180864Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1491911889:195009..195184TCONS_00056156-exon-scaffold_268-1491911889:195009..195184Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:195009..195184TCONS_00056156-exon-scaffold_268-1510915933:195009..195184Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:195009..195184TCONS_00056156-exon-scaffold_268-1575043694:195009..195184Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1491911889:195461..195681TCONS_00056156-exon-scaffold_268-1491911889:195461..195681Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:195461..195681TCONS_00056156-exon-scaffold_268-1510915933:195461..195681Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:195461..195681TCONS_00056156-exon-scaffold_268-1575043694:195461..195681Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1491911889:196303..196383TCONS_00056156-exon-scaffold_268-1491911889:196303..196383Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:196303..196383TCONS_00056156-exon-scaffold_268-1510915933:196303..196383Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:196303..196383TCONS_00056156-exon-scaffold_268-1575043694:196303..196383Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1491911889:196716..196831TCONS_00056156-exon-scaffold_268-1491911889:196716..196831Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:196716..196831TCONS_00056156-exon-scaffold_268-1510915933:196716..196831Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:196716..196831TCONS_00056156-exon-scaffold_268-1575043694:196716..196831Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1491911889:197805..197826TCONS_00056156-exon-scaffold_268-1491911889:197805..197826Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:197805..197826TCONS_00056156-exon-scaffold_268-1510915933:197805..197826Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:197805..197826TCONS_00056156-exon-scaffold_268-1575043694:197805..197826Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1491911889:198064..198142TCONS_00056156-exon-scaffold_268-1491911889:198064..198142Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:198064..198142TCONS_00056156-exon-scaffold_268-1510915933:198064..198142Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:198064..198142TCONS_00056156-exon-scaffold_268-1575043694:198064..198142Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1491911889:198399..198766TCONS_00056156-exon-scaffold_268-1491911889:198399..198766Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1510915933:198399..198766TCONS_00056156-exon-scaffold_268-1510915933:198399..198766Clytia hemisphaericaexon
TCONS_00056156-exon-scaffold_268-1575043694:198399..198766TCONS_00056156-exon-scaffold_268-1575043694:198399..198766Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_268supercontigscaffold_268:180823..198766 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.90298	7.32435	6.89666	5.22475	17.3632	19.0469	16.1343	11.8168	24.6336	23.9358	18.4288	24.6103	12.0374	9.78101	5.22842	6.13575	8.48414	10.0594	15.777	23.1	12.8586	12.1772	6.97189	9.71057	2.25899	7.04513	13.3887	12.7248	6.30477	4.14932
Blast
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BLAST of TCONS_00056156 vs. Swiss-Prot (Human)
Match: PTPC1 (Protein tyrosine phosphatase domain-containing protein 1 OS=Homo sapiens GN=PTPDC1 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.030e-78
Identity = 119/224 (53.12%), Postives = 163/224 (72.77%), Query Frame = 3 
Query:  186 GMNPDSDSIKWVITKDDYSTASILNEIQKLPEPKYSAFGERIRHVAPTAMQCSMFCGGKQCKYCNPARFKKEPNQDAINGLYSAWVTSNILATSRPSTTAIKQYNIIEQFQKKEIRSIINLQHPGEHAACGFGLE-AGGFTYVPQDFMDNDVFFYNFGWNDYGVRSLQSILDMVKVFDFALSKGKAAVHCHAGLGRTGVLIACYLIYSMRLTSHEAIMKVREAR 854
            G+ P ++     +  +    A++   +++ P PKY+  GER+RHV P  M CSM CGG+ CKY NPAR+ ++  + AI G+YS+WVT NILA +RPS+  +++Y+II+QF    I++IINLQ PGEHA+CG  LE   GFTY+P+ FM+  ++FYNFGW DYGV SL +ILDMVKV  FAL +GK A+HCHAGLGRTGVLIACYL+++ R+T+ +AI+ VR  R
Sbjct:    4 GVLPQNEQPYSTLVNNSECVANMKGNLER-PTPKYTKVGERLRHVIPGHMACSMACGGRACKYENPARWSEQ--EQAIKGVYSSWVTDNILAMARPSSELLEKYHIIDQFLSHGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMTFALQEGKVAIHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKR 224
The following BLAST results are available for this feature:
BLAST of TCONS_00056156 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTPC18.030e-7853.13Protein tyrosine phosphatase domain-containing pro... [more]
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