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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056040 ID=TCONS_00056040|Name=TCONS_00056040|organism=Clytia hemisphaerica|type=transcript|length=1199bp
CTCAAACAACAGAAGACTAAGAAAGACAGACATGATGTAGATACAACGAA
TTGATTAAGCGTGTGAAAAAGCTgtgaaattttatcaaaatgagtAGATG
TTCAAGATTGTAATATGACGCCTACGAACGAACCCCTGCAAcatatggaa
aacttttgagtACCGTTGATACTATATCTGCGAAATATGCGACGTCAGAT
CATACGAGTCTATTTTCTTCTATCTGCTGAGGGTGCTCGATGATATCAGA
GCTTGTTCAACttaaaagaaagagactttgatttattgtttagaacttta
agtttcatgccgCCCGTATGGACGACAATGATCAGCTAAAATGGTTGTTA
ATAAAATGATTGACGACGTCAGATCATAAATTTTTTACCACACCAGAAGT
TCTTCATGGATTTAAAATGTTGGACATCTCAGTTTTAGTCAAATGGAATA
TTGACGCTTCGCTACTCAAAGATTTGCTGATTGAACACGTTCTTTTTTCG
ATCAACTGGTGAGATGACTGATGACTGACAAACCATCAAAGAAAGACAAT
TGAATGAAAACGTTTTTGATAACTGGTAcataaaaaagtactttatAAAA
AGGGCAGTGGCTAGATTTTCGTATTCTCGAATCTAGAATGAAGTGTTCAG
GCGCCTCCTTCCCTCCACTAGCCTTTCAACACTTCATATGCGAGACACTC
TTCTGTATGTAACCTTATGAAAACTGTTGAAATAAATCAAATGCCAATGG
TGGTATCAATCAAATGGTATTTGTATCATTATTCAGGGACGGCGGGAGAT
ACATGCTGCCAGCGATTTATCGATTTAATCAGGAGTGTTCTACAAAAGCC
CGAGGACTTTCCTTAATGACATTAATCTTTGGTTTTGTTTATATGTTCTC
TTTGATGACTTTGTCGAATTCGCAAGTTGAATACTGACAGACTGTAGGTC
AGTGTGATCAACAGTGAATGTAGAGTGAATTTAGAGTATAGTCTTCGCGT
CTTTTTTATCAGTTGGTTCACGGggcttttcaagatttttagtcAAATCT
TACATTTTGTTTCTATGGAATTTAAGTAGTACCtccttaaaaacattttt
gaaaccaCTGCTAACGGTGATGTCCCTGAATGCCATTTTGGtggatttcg
aaaaatgtttcagAGACCGTACTTTATGGAGGTGCTACTTGAAATTCCA Run BLAST on NCBI transcript from alignment at scaffold_266:159257..160455 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056040 ID=TCONS_00056040|Name=TCONS_00056040|organism=Clytia hemisphaerica|type=transcript|length=1199bp|location=Sequence derived from alignment at scaffold_266:159257..160455 (Clytia hemisphaerica)
TGGAATTTCAAGTAGCACCTCCATAAAGTACGGTCTctgaaacatttttc
gaaatccaCCAAAATGGCATTCAGGGACATCACCGTTAGCAGtggtttca
aaaatgtttttaaggaGGTACTACTTAAATTCCATAGAAACAAAATGTAA
GATTTgactaaaaatcttgaaaagccCCGTGAACCAACTGATAAAAAAGA
CGCGAAGACTATACTCTAAATTCACTCTACATTCACTGTTGATCACACTG
ACCTACAGTCTGTCAGTATTCAACTTGCGAATTCGACAAAGTCATCAAAG
AGAACATATAAACAAAACCAAAGATTAATGTCATTAAGGAAAGTCCTCGG
GCTTTTGTAGAACACTCCTGATTAAATCGATAAATCGCTGGCAGCATGTA
TCTCCCGCCGTCCCTGAATAATGATACAAATACCATTTGATTGATACCAC
CATTGGCATTTGATTTATTTCAACAGTTTTCATAAGGTTACATACAGAAG
AGTGTCTCGCATATGAAGTGTTGAAAGGCTAGTGGAGGGAAGGAGGCGCC
TGAACACTTCATTCTAGATTCGAGAATACGAAAATCTAGCCACTGCCCTT
TTTataaagtacttttttatgTACCAGTTATCAAAAACGTTTTCATTCAA
TTGTCTTTCTTTGATGGTTTGTCAGTCATCAGTCATCTCACCAGTTGATC
GAAAAAAGAACGTGTTCAATCAGCAAATCTTTGAGTAGCGAAGCGTCAAT
ATTCCATTTGACTAAAACTGAGATGTCCAACATTTTAAATCCATGAAGAA
CTTCTGGTGTGGTAAAAAATTTATGATCTGACGTCGTCAATCATTTTATT
AACAACCATTTTAGCTGATCATTGTCGTCCATACGGGcggcatgaaactt
aaagttctaaacaataaatcaaagtctctttcttttaaGTTGAACAAGCT
CTGATATCATCGAGCACCCTCAGCAGATAGAAGAAAATAGACTCGTATGA
TCTGACGTCGCATATTTCGCAGATATAGTATCAACGGTactcaaaagttt
tccatatgTTGCAGGGGTTCGTTCGTAGGCGTCATATTACAATCTTGAAC
ATCTactcattttgataaaatttcacAGCTTTTTCACACGCTTAATCAAT
TCGTTGTATCTACATCATGTCTGTCTTTCTTAGTCTTCTGTTGTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056040-exon-scaffold_266-1491911889:159257..160455 | TCONS_00056040-exon-scaffold_266-1491911889:159257..160455 | Clytia hemisphaerica | exon |
| TCONS_00056040-exon-scaffold_266-1510915933:159257..160455 | TCONS_00056040-exon-scaffold_266-1510915933:159257..160455 | Clytia hemisphaerica | exon |
| TCONS_00056040-exon-scaffold_266-1575043694:159257..160455 | TCONS_00056040-exon-scaffold_266-1575043694:159257..160455 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:159257..160455 . |
Blast
The following BLAST results are available for this feature:
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