TCONS_00055968 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055968
Unique NameTCONS_00055968
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2217

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055968 ID=TCONS_00055968|Name=TCONS_00055968|organism=Clytia hemisphaerica|type=transcript|length=2217bp
TAGATATGTTAAAAAGTTTCCACTTGAAACAGCTATAGATAGAATGTGGC
TCTCTactttcaaagaaattttcatgcTTTCACTGTTTGCATTAGTCAAA
GCACAAAaTCACTGCTCCCCACCTTCGTTGGAGAACGCTGAGCTAATCTC
AACACCAGCACCAAAACAACAATATAATACAAATGATGTTGTATATTACA
AATGTAAATCCGGGTATCATTTCAAAGGGAGTAGTGccacaaaacacaaa
acaagATGTACAGAAAATGGTAACTTCAGTCCAGCCCCTTTGAAATGTTa
cgATTTGTGTGACAACCGTTGTCAAAATGATGCTTTTTGTAATCAAGGAA
GATGTAGTTGCGATCAAAATCATATTGGAGTCAGCTGTGAAATGAGAATT
TGCAAATTACCATCTGTTCTACATGGCACAGTGAAACAGGTCAATCCCTT
AAACGTGGACGGCAAACCTGGTTGGGTCCGTGAAGGCGCCAGCATATTGT
TTCAATGTGACAAAGGGTTTTCTATCAAGAAAGGAACTTCTTTTTCACGT
TGTCGCCGTGCATTAGGATGGGATTATGGTACCCTCCCTGTCTGTCAACc
tGACATATGTGAGCATAGCGACATATCGCATGGTACCGCTAAACCATACA
GGGATGTGTATGCAGTTGGGCAAACGGTCACTTTTAGTTGTAACCAAGGC
TACGAAATCTTGCATGGTGATCATCAATTGTCTTGTGGCATTGGAGGAGT
GTGGAGCGGTACATGGCCGAGTTGTCTACCCAAGAAATGTCCATCCATTC
ATTTACACAATGGAATGATTGACCCTCCAAATGCTCGATTGACAACAGGA
GAATACCCAGTGGGAAGCAAATTATCCCTCAATTGCATCAGTGGGTTCTA
TTACAGAGGTATTTCATCAAAGATTGCATGTGTAGGCCCTCCGACAGTGG
AATGGTCATCAGAACCTGGCGTATGTATTTTACTGAGCGAGTTTAACGAT
GAATGCCAGACTGAAGGGAAAATTATGAAAGTGGATGGAAACGGTGATGC
ATCTTGTGTTTTTGTTAAACCAACAACCAAACTTTCTCAAACCTCAACCA
ACGCCAAATCTGGACAATCTCTTACCATCACTTGCCAAGTTGAAGGCTTC
CCTAAACCTCGAGTCCAATGGCAAAAGAATGATGATGTATTCAGAGTTGA
CGGGTTACGAATCACTCGTACTGACAGCGCTATTACTTTCAAGAGGCTGG
TAACGAGTGATTCAGGGAAATATGATTGTATAGCTTTCAATGCTGCAGGA
TCATCGACCTCAACTGCTAATTTGAAAGTTGCTGCAGACGAGAACACCAA
CGAATCCATTTCAACAGGTGAAGAATCCTCAACAAGTACTGATGACAATA
ACTGTCAAGATCAACAGAATACTTGCAATCTCGCTAAACAAATGAAACTT
TGTGAATTTCCTCACTATGAAAAACGTGTCTGTTGCAAGACCTGTCGCAA
ACTTGCAAACGAAGTCATCAAAAAGTCCCGATAGCTACATTATATAATTT
CTAAGCCTTTTTCGATCTAGTGTGTAGAACTATGAAAATCGTTTATCTAA
TTTGAGATAATTTTGGAGTCAAAATTCTGGACTTACTGAATAGACCACAA
AAGGATCATAGACTGAAACAAAGAGGGGAATATCATGATATTTTGAAGAC
AAGAGCACAATTCCAACAAGAACCAACACACCTGAACAGAACTTCTATCA
GAATCTAGCCTGAACCATGTCTGAAAAGCCATACGATTGTACTTTGTTGA
AAACctactttaaaatatttttctccttatGCTAGCACCAGTTAACTTGA
GCTGAAGTTAAGATGATTTatttttccttgatttttattaaataatCAGC
AATTTAGAAACCCAAAACttggtgttcttataaatttcttTCTCATAAAA
GTGTATGGGGGGGATTGGTGCAGGCTAGAAAGGATTTGATTTATGAAATC
TCTGTATTGGTGGATACATAACTACCAAAAATGACTAACAGACAAAAGAA
TTTCGCCGCATATTGTACATAATTAGTTTTTACTGCGAATTTATATTTAT
Atgcttcatttttgattttctttctattttttatacattacaaataaaac
tttctatctaaaaacttttttacctTTATTGACTCAGTGTGGAATGAGAG
CTCAGTGTAGATTCTCA
Run BLAST on NCBI

transcript from alignment at scaffold_266:77564..87432-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055968 ID=TCONS_00055968|Name=TCONS_00055968|organism=Clytia hemisphaerica|type=transcript|length=9869bp|location=Sequence derived from alignment at scaffold_266:77564..87432- (Clytia hemisphaerica)
TAGATATGTTAAAAAGTTTCCACTTGAAACAGCTATAGATAGAATGTGGC
TCTCTACTTTCAAAGAAATTTTCATGCTTTCACTGTTTGCATTAGTCAAA
GCACAAAGTATGTATTATGATAATTTATTTTTGGCTAGATCATGCAAGAT
CAATTTTGAAATAGTTGTGTTGTTTTTCAATCAAGGATGAGACAGTGTTT
ACTTTTGAAACTTTCAATTGAGATTCTTCAATAAGAAAGTTCATTCATAT
CCTTCATTGAGCGTTTAAAAAAAATTTTCTTTATAGATCACTGCTCCCCA
CCTTCGTTGGAGAACGCTGAGCTAATCTCAACACCAGCACCAAAACAACA
ATATAATACAAATGATGTTGTATATTACAAATGTAAATCCGGGTATCATT
TCAAAGGGAGTAGTGCCACAAAACACAAAACAAGATGTACAGAAAATGGT
AACTTCAGTCCAGCCCCTTTGAAATGTTACGGTAAAATTATTTTTTCAAA
TTCTTTTTCTGATGAGTTCCTACATTTATCACATTTTAGTGTGAATTTCA
TTTTTCAAAGATTTTGATTTTTGGGGCCTGGGGAAGAGTTTTTCGCCAAA
ACGAGGTTAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTCGGATT
TGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGGGGTGTTT
TTTCATTTTTCAAAAATTTAGATTTTTGGGGCCTGGGGACAAGTTTTTCG
CCAAAACGATCTTTTGTGACTTTAATAATGAGTTTTAAAATTAGTTTGTT
TTGCTACAATCGGGCCTTTGAATAATTTGAAGCGACTGAAGTTGAGCCTT
AGTGCGTTGCGCACGTTCAGCCATATTAGAATATTAGAACCCCATGGTAC
TAAAAGGTTTTTTTATATTTCGGATATACCACTATGTCACCAAACAACAT
GATGTCTGATATTTTAGCACCACATTACAATTATACAGTTTTTTACAGAT
ATTTTTAAATCTTTATAGATTTGTGTGACAACCGTTGTCAAAATGATGCT
TTTTGTAATCAAGGAAGATGTAGTTGCGATCAAAATCATATTGGAGTCAG
CTGTGAAATGAGTATGTGTCTTTCTTGTGAACTTTAGTATCTGGTGTTTT
ACTTTTTCCCTTATTTTATTATTTTTCATCTTTAGATTTATTGTAGAAAG
CGATTTTTTATTTTTATCTTTCAGGAATTTGCAAATTACCATCTGTTCTA
CATGGCACAGTGAAACAGGTCAATCCCTTAAACGTGGACGGCAAACCTGG
TTGGGTCCGTGAAGGCGCCAGCATATTGTTTCAATGTGACAAAGGGTTTT
CTATCAAGAAAGGAACTTCTTTTTCACGTTGTCGCCGTGCATTAGGATGG
GATTATGGTACCCTCCCTGTCTGTCAACGTAAGGAAACTTTCACTAGATG
TTTTTTTATAAGATTAGCTCTATCAATTATTGGTTTAGTGAACAAATCAA
CACAGAAAGTGCCCGATACCAAAGAGTGCGTTTCCATTAAAATCTTACAA
GACGAGTTGCAAATTTACAAATTTACATTACTTGGGAGTTTCATGCTCCG
TGAAAGTTAAAAAACAAAATTCATTCATTCATGGAATATTTCTTCTTTTT
TCAGCTGACATATGTGAGCATAGCGACATATCGCATGGTACCGCTAAACC
ATACAGGGATGTGTATGCAGTTGGGCAAACGGTCACTTTTAGTTGTAACC
AAGGCTACGAAATCTTGCATGGTGATCATCAATTGTCTTGTGGCATTGGA
GGAGTGTGGAGCGGTACATGGCCGAGTTGTCTACGTAAGTTGGCATAGTG
TCCTCCCCTCCCTTTTAAAAGGGGGGGGGANTTACAAGACGAGTTGCAAA
TTTACAAATTTACATTACTCGGGACTTTCATGCTCCTAGCAATCGTCAGA
TGTGAAAGTTAAAAAACAAAATTCATTCATTCATGGAATATTTCTTCTTT
TTGCAGCTGACATATGTGAGCATAGCGACATATCGCATGGTACCGCTAAA
CCATACAGGGATGTGTATGCAGTTGGGCAAACGGTCACTTTTAGTTGTAA
CCAAGGCTACGAAATCTTGCATGGTGATCATCAATTGTCTTGTGGCATTG
GAGGAGTGTGGAGCGGTACATGGCCGAGTTGTCTACGTAAGTTGGCATAG
TGTCCTCCCCTCCCTTTTAAAAGGGGGGGGGGATTTTTTTCAGAAAATGG
GAAAAGGGTGGGCAAAATCGTTTTCAAAATTCTAGAGGGGCAATCAAAAG
GGTGGGGAGAAAAAATCTGAGGAAAAAAATTTTCTGTTACTCTGGTGTTA
AAACATAAAATATATCTGTTCAACTTCAAGCTAAAAACATGTAATAGTGT
TTTATATTCTGGTGGTGACAATTTACATATTTTCTTTGTATATAGGGACG
AGATAACATGAATAGAAGCAGTATTATGTTATGAGAAAAAAATCAAAAAA
AAATTCAAAAGGGGGCGGAATNTACATTTTTTTGCTTTCAGCCAAGAAAT
GTCCATCCATTCATTTACACAATGGAATGATTGACCCTCCAAATGCTCGA
TTGACAACAGGAGAATACCCAGTGGGAAGCAAATTATCCCTCAATTGCAT
CAGTGGGTTCTATTACAGAGGTAAGAAATAATATCATCAATTTCAATTAT
TTGGATTTGTGATACCACGTTCGTTTTCTTTCATTGCTTCATTATGTGTT
CTTTCTCAAATTACATTACTTACAGGAAAGGTACAAATTTTCATGAGAGT
TTTTGTGGGAAAATCCAACAATATGGATAGGGTTTAGAAAACCTGTAATT
AATCTCCAATCATCTTTATGATGATCTGCAGCTTATAAAAGAAGAAAAAG
CTTTCTTGATAGCAATATGAGATAAAAAACAATCCACTGATCTCTTTTTA
GACGGGAACCTCTAAACTGAGAACTGGAGTGAAATTCGAACTCTTACTAA
ATTCTTGATAATATGAAAAGAGAAAAAGTACCATCTAACGAAGATCATTA
AGAGGAAATGCAAATTCCAAAGGGACACTTTTTTGACCTGAGCTTTAAAA
CTTCTAATGAGCCAACGAGGGAAAAGTGCCTCGGCTATTTTAGGGTTTTA
GGTTTTAGGTAATTTCCGTTCATATAGTTTTTTCTCATATTTTAGTTTTA
CTAACACGCTTCAATATTCCTGCTGGAAATTACTTTCTTGATCATAATAC
TCTTGACAAAAAAATTCAAATTTAACTGCTTTATAACCCAGCTGAATAAT
CTGATTAAAGTGGCGGGGAAAAGCAATGTTTGAAAAATCAATTTTGCGCA
TGCTTTTAAAAACATACTGTCATAAAAATATTCCACTTCATTTGTCTTTT
GGTCGTCAATTTTGATTATACGTTGGACAACTTTCCTCCCATTCTTGCAG
TACTCTGGTAATTCATCCAACAAATTTTGGACGTGTTCTTGATACATTTT
TTCTGTTTCGTCATCATCAAACTGGACATCGAACTCCACTTTCATGATTA
ACGCTTTGTCACAATCCTCTTTTTCAATTTGATCCGTTAAATCAATCCAA
TAATTATATTCGAATGTTTTCTCTTCCCTCCATATGATTCTTCTTGAAGG
CAAAACAAATTTATCAGGTTCAAAGACTTGACAGTATGTTATAACTTTGG
GTTTCTCTGAGATCTTGTCATCAAGGAATTGCATCCAATCTACCGCGTTA
TCATCGGGTACATTTCGGTCGAGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATAAAAGAAGAAAAAGCTTTTTTGATAGCAATATGA
GATAAAAAACAATCCACTGATCTCTTTTTAGACGGGAACCTCTAAACTGA
GAACTGGAGTGAAATTCGAACTCTTACTAAATTCTTGATAATATGAAAAG
AGAAAAAGTACCATCTAACGAAGATCATTAAGAGAAAATGCAAATTCCAA
AGGGACACTTTTTTGACCTGAGCTTTAAAACTTCTAATGAGCCAACGAGG
TAGTGCCTCGGCTATTTTAGGGTTTTAGGTTTTAGGTAATTTCCGTTCAT
ATAGTTTTTTCTCATATTTTAGTTTTACTAACACGCTTCAATATTCCTGC
TGGAAATTACTTTCTTGATCATAATACTCTTGACAAAAAAAATCAAATTT
AACTGCTTTATAACCCAGCTGAATAATCTGATTAAAGTGGCGGGGAAAAG
CAATGTTTGAAAAATCAATTTTGCGTATGCTTTTAAAAACATACTGTCAT
AAAAATATTCCACTTCATTTGTCTTTTGGTCGTCAATTTTGATTATACGT
TGGACAACTTTCCTCCCATTCTTGCAGTACTCTGGTAATTCATCCAACAA
ATTTTGGACGTGTTCTTGATACATTTTTTCTGTTTCGTCATCATCAAACT
GGACATCGAACTCCACTTTCATGATTAACGCTTTGTCACAATCCTCTTTT
TCAATTTGATCCGTTAAATCAATCCAATAATTATATTCGAATGTTTTCTC
TTCCCTCCATATGATTCTTCTTGAAGGCAAAACAAATTTATCAGGTTCAA
AGACTTGACAGTATGTTATAACTTTGGGTTTCTCTGAGATCTTGTGATCA
AGGAATTGCATCCAATCTACCGCGTTATCATCGGGTACATTTCGGTCGAG
TGATTTCAATTGTCCAAGTAAACCATTCCTAATCCTTATTTGAATAAGAG
AAAAGACTGCCCACGATAAACACCACGTTCTCTCAATTGAGGATAAGTTC
AGAAAGATCGAAATCATGATAGAAGCAATAAATTCTAAAAAAAGAAAGAT
ATTTATTAATTATACAGCAAACTAATTATTAATGTTGTTCCAAAACATTT
GCAGTTCGTATTTTTCTAAACATAGCTTTTAAGAAGAGAGGAAGACATTA
AAACAAAGTGTTAAATGGGGGGGTTGCCTTTTCTGGGAGGTAAGGAGGAA
ATCATGGAAAAATTCAGGAAGGGGGGGGGGGGGGGGGCAAATGGGGGGCA
AATGAAAACTTTTAGCAGGGGAAATGTTTTATAAAGACATTTCAAAAGTG
GAAAAAGAAAACTTCTGTCTTTTTTATATTGTTAAAAGCTTTTTGTTTAA
ATATATTCATTTTGCGATAGGATGACTTCATTGCAAAACATATTTACTTG
ACTTTTCATTATTAGAAATTGTTCATCTTAATAGTAAGCTTGCTTCTTCA
TCTTAAAAAGCCTGTTTTTTTGTCATTTGTATATCTTTAAATAACTAAAT
AATAATTGGCAAGCCTAGAAAATCTTTTGCTTTTGCTTGAGATGGGAAAT
CGCTGACTTTAGGGATAAGCAAGGGGGAGATCAAATAGGGGTGGGAAAGC
AAAAAAATTGGCCGCTGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCAGTTATAACTCAAA
ATATTTTGGAAAATGAAAGTGAAAAAAAAAATTCAATGCTCCAAAATAAC
AAAAACTTTTTTGAATACCACTTCGATAATGCAGAAATATTATGATCGAG
GACTTTGTTAGTGTTTATATACTTACCGAAACATAAAAGCCACAAATGAA
ATGAGCTTTTTTCAAGCATCAGAAATATGTATCCGAGAATTCCATCGCAA
AAATGAAACAACAAAAACACATAATGAACTGCCGAAGTGTGTTTTGGGTA
TCGAACAAATGAAGGTATGATAGCAAATCCAAAAATGATATAACATGCCA
CACCGAACGTACAAACATCACTTAAATATTCAACCATATAAATCATTTTG
ACGCAATAACCTCGAACGTAAAGAAAACTTTTCCACTAAAAGTTATTTTT
TACATTGCTCTTGCTTTAATCGTTTCTAACAAACCTCGCTTTTGCAAATT
GATTTTGAAATCACGAGACTTAATGTTTCTTAATTATGACATTTTTTGTG
TGAATGGAATGTAATTTAATTATAAAAAGACGGAAACGATTTTTTTCTAG
TTTTTTTTTTCCAAGGGACCATTTAAAAAGTACGTACGCTCGAGAGGGGG
AGGGGGTACTCCCAAAAGCGTAAGAAAGCGTACGAGGGGGAGGGGGGTCC
TTGAGGAGAAGTACGTACGCTCGCAATTTTTCCTGTCTTTTTTGAGAGAA
AAACGCAATATTTCACATTAAAAATTATTTTTGCGATTGTTATTTTTCAT
TTCTCCTTTGGTATTTTTTTTCATCTTATAGATTCTTTAAATTTCTTGAG
ACTTTCTTCTAAATACGATTGGATACCTATATATTCTACTGTTACAAGAG
TTTCAAGTTTCGACTTTCGTTAAGGGGGGGGGGTGTACTAAAAAGCGTAC
GTACGCTGAAGGGGGGTACACATAAAGCGTACGAAAGCGTACAAGGGGAG
GGGGATTTAAAAATTTGCCATTTTCGAGCGTACGGGCACTATGAAAGAAG
GGGCAATCCTTTGTGATATCATATTTACCATTCCGTGTAGGTATTTCATC
AAAGATTGCATGTGTAGGCCCTCCGACAGTGGAATGGTCATCAGAACCTG
GCGTATGTATTTTACTGAGCGAGTTTAACGATGAATGCCAGACTGAAGGG
AAAATTATGAAAGTGGATGGAAACGGTGATGCATCTTGTGTTTTTGGTGA
GTGTTGTATTCACTTATCAAGGTCAAGTATTTTATTCGTGCAAGAAAACA
TGATTGAATTTTCCACATTCTAAGATTTGTAACGTGAGCATAATGAAAGT
TCTTAGTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGT
CCGTTCGTCCGTTCGTCCGTTCGTTCGTTAGTTATTAGCTTTCCTCATGA
TTNATCTTGTGTTTTTGGTGAGTGTTGTATTCACTTCTCAAGGTCAAGTA
TTTTATTCGTGCAAGAAAACATGATTGAATTTTCCACATTCTAAGATTTG
TAACGTGAGCATAATGAAAGTTCTTAGTTTTTGCTTTAACGCTTGTTGGT
CTTTTTTTTAATAGCATACCGCAGTGATTCTAAAAATAGACATCAAAATT
ACTGTTTGTCCGAGAAATGAAAATCCCATCATGCTTTGCATTAATTGCTT
TTGCAAGTCAATTACATTTATTGATAATACCAAATTAGTCTAGCAAGCTA
GACGACTAATTCAGACAAAGTGGAAATAAACAAAAAGTAAAAGTTTATGC
GTAGCTAGCCGGGGATTCTATGAGGCCAGAACACCGGATTCTTCCAGTCG
TTTATACAAACTACCTTATCGGCCCTTTTTACGCCGGCCCTTATTGGCGT
TATTTCTGGGCTCGTGGCTTAATAAGGGCCGGTGTTAAAGGATGGGAATC
AAAAGGGAGAGGATTCCCTTGATGTTCTTGTTTATGGTGAGTGATGCTTT
ATCAGCGTTTCTGGATTGGATCGCTCGGTTTTTGTTTCATTTATAATTTT
GGTTTTTGTCAAGAGTTTAATCAGTGTTGCATCCTTTGTCTATTTGAAAT
CTAAAATATCAAGCCATGAAAGAACAAATCCTTAAACCTAAAGGCTAATA
TTGATTAGCATGGGAAAGAAAGCTGTTCCTCGTTAAGGTTTCGTTAAGGC
AACAGTTTGCAACAATTTTCGGGATTGATTACTGTTAGGCTTAGTTTAAC
ACTCTAAGTTCAAATTGATCATTCCAATGTTATTTCTCTATTCATTACAG
TTAAACCAACAACCAAACTTTCTCAAACCTCAACCAACGCCAAATCTGGA
CAATCTCTTACCATCACTTGCCAAGTTGAAGGCTTCCCTAAACCTCGAGT
CCAATGGCAAAAGAATGATGATGTATTCAGAGTTGACGGGTTACGAATCA
CTCGTACTGACAGCGCTATTACTTTCAAGAGGCTGGTAACGAGTGATTCA
GGGAAATATGATTGTATAGCTTTCAATGCTGCAGGATCATCGACCTCAAC
TGCTAATTTGAAAGTTGCTGCAGACGAGAACAGTAAGCTTGCTTTCTCGA
CCAATCACATCCAAGTACCCTTTTACGTCGGCTATATTTCCACCTCAGAC
ACAGAATAATACACCAATAAGGGCCAAATAAGTAGGTCATTTTGGGGTAG
AGACTAATTTTCTTTACTGAGGATACCTCAGACTTCAAAACTCTACGAAT
TTCCTTAAACTGGATATTGAAATCTGTAAGCTCTCTAAGTTCTATACTTA
GGTGCTTACGCAAAGTTTCTATGATTACTTTTGATTCTGTCTTTTTAGCC
AACGAATCCATTTCAACAGGTGAAGAATCCTCAACAAGTACTGATGACAA
TAACTGTCAAGATCAACAGAATACTTGCAATCTCGCTAAACAAATGAAAC
TTTGTGAATTTCCTCACTATGAAAAACGTGTCTGTTGCAAGACCTGTCGC
AAACTTGCAAACGAAGTCATCAAAAAGTCCCGATAGCTACATTATATAAT
TTCTAAGCCTTTTTCGATCTAGTGTGTAGAACTATGAAAATCGTTTATCT
AATTTGAGATAATTTTGGAGTCAAAATTCTGGACTTACTGAATAGACCAC
AAAAGGATCATAGACTGAAACAAAGAGGGGAATATCATGATATTTTGAAG
ACAAGAGCACAATTCCAACAAGAACCAACACACCTGAACAGAACTTCTAT
CAGAATCTAGCCTGAACCATGTCTGAAAAGCCATACGATTGTACTTTGTT
GAAAACCTACTTTAAAATATTTTTCTCCTTATGCTAGCACCAGTTAACTT
GAGCTGAAGTTAAGATGATTTATTTTTCCTTGATTTTTATTAAATAATCA
GCAATTTAGAAACCCAAAACTTGGTGTTCTTATAAATTTCTTTCTCATAA
AAGTGTATGGGGGGGATTGGTGCAGGCTAGAAAGGATTTGATTTATGAAA
TCTCTGTATTGGTGGATACATAACTACCAAAAATGACTAACAGACAAAAG
AATTTCGCCGCATATTGTACATAATTAGTTTTTACTGCGAATTTATATTT
ATATGCTTCATTTTTGATTTTCTTTCTATTTTTTATACATTACAAATAAA
ACTTTCTATCTAAAAACTTTTTTACCTTTATTGACTCAGTGTGGAATGAG
AGCTCAGTGTAGATTCTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035233XLOC_035233Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055968-exon-scaffold_266-1575043694:87326..87432TCONS_00055968-exon-scaffold_266-1575043694:87326..87432Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:86952..87146TCONS_00055968-exon-scaffold_266-1575043694:86952..87146Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:86322..86414TCONS_00055968-exon-scaffold_266-1575043694:86322..86414Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:86005..86208TCONS_00055968-exon-scaffold_266-1575043694:86005..86208Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:85616..85778TCONS_00055968-exon-scaffold_266-1575043694:85616..85778Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:85247..85263TCONS_00055968-exon-scaffold_266-1575043694:85247..85263Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:84763..84891TCONS_00055968-exon-scaffold_266-1575043694:84763..84891Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:80037..80192TCONS_00055968-exon-scaffold_266-1575043694:80037..80192Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:78701..78982TCONS_00055968-exon-scaffold_266-1575043694:78701..78982Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1575043694:77564..78434TCONS_00055968-exon-scaffold_266-1575043694:77564..78434Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:87326..87432TCONS_00055968-exon-scaffold_266-1510915933:87326..87432Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:86952..87146TCONS_00055968-exon-scaffold_266-1510915933:86952..87146Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:86322..86414TCONS_00055968-exon-scaffold_266-1510915933:86322..86414Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:86005..86208TCONS_00055968-exon-scaffold_266-1510915933:86005..86208Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:85616..85778TCONS_00055968-exon-scaffold_266-1510915933:85616..85778Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:85247..85263TCONS_00055968-exon-scaffold_266-1510915933:85247..85263Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:84763..84891TCONS_00055968-exon-scaffold_266-1510915933:84763..84891Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:80037..80192TCONS_00055968-exon-scaffold_266-1510915933:80037..80192Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:78701..78982TCONS_00055968-exon-scaffold_266-1510915933:78701..78982Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1510915933:77564..78434TCONS_00055968-exon-scaffold_266-1510915933:77564..78434Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:87326..87432TCONS_00055968-exon-scaffold_266-1491911889:87326..87432Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:86952..87146TCONS_00055968-exon-scaffold_266-1491911889:86952..87146Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:86322..86414TCONS_00055968-exon-scaffold_266-1491911889:86322..86414Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:86005..86208TCONS_00055968-exon-scaffold_266-1491911889:86005..86208Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:85616..85778TCONS_00055968-exon-scaffold_266-1491911889:85616..85778Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:85247..85263TCONS_00055968-exon-scaffold_266-1491911889:85247..85263Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:84763..84891TCONS_00055968-exon-scaffold_266-1491911889:84763..84891Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:80037..80192TCONS_00055968-exon-scaffold_266-1491911889:80037..80192Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:78701..78982TCONS_00055968-exon-scaffold_266-1491911889:78701..78982Clytia hemisphaericaexon
TCONS_00055968-exon-scaffold_266-1491911889:77564..78434TCONS_00055968-exon-scaffold_266-1491911889:77564..78434Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:77564..87432 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.660405	0.113115	2.68784	1.31765	23.0815	12.4414	15.5068	14.3148	12.4141	12.6363	18.8684	8.32342	19.8842	21.9932	7.71559	11.8321	8.85523	10.8314	12.7506	13.897	13.6596	10.3483	10.0227	10.1686	33.85	29.327	12.2344	6.61854	5.08636	9.73703
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055968 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top