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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055876 ID=TCONS_00055876|Name=TCONS_00055876|organism=Clytia hemisphaerica|type=transcript|length=530bp
AAAGCCACCGAAAAGAAAAGCTCAACAGAAGGTTGAAAATTTGGATGGAG
CTGCGAAGTCAAAATGGTATTATGGGCCAGCGCCAGAGAAAAACATATTC
CAAGAAAACCCAATTGTAGAGGGCCCACGGGTGAGAAGGACAAAGACAAA
ACAGCTGGAAGATTGATCAGAcgtaagtttttttcttttttgttttcttc
actGTTTGCTGATTATTCATTGTTGTCAGTTGTTTGCTCATCTTCTCTTG
ATTAACAATCATTTTTCTTTGAGTTTCAAATTTGTATGTAGCAAGACCTT
TCAATTGATTGCTTTAATTTATTGTTCCTTAGAATGACGATACCATAGCG
TCCACAGGGCTGTATGGCGATGGTGTTTTGAACGACTCGGTCTCGGTTCT
GAGATGGAATTCTGGAGATTTTCGAACGACATGTAAATAACGCTGACTCA
AATTCAAATagtatataagattttttaatttgataaaatatttttcttat
tcaTAGTAAAGATGACAATTTTAAACAAGA Run BLAST on NCBI transcript from alignment at scaffold_264:56956..58121- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055876 ID=TCONS_00055876|Name=TCONS_00055876|organism=Clytia hemisphaerica|type=transcript|length=1166bp|location=Sequence derived from alignment at scaffold_264:56956..58121- (Clytia hemisphaerica)
AAAGCCACCGAAAAGAAAAGCTCAACAGAAGGTTGAAAATTTGGATGGAG
GTGAGTCCACCCACCAACCCACTTTTTGTCAAAAAAATCTGACATTTTCA
GTCGGACTGATTATGTCGGACTTTTTACTGCTTTTTATGGATTTTCTTGG
AACCGGCATCCGAAAATCAACCGAACCATTTGTTCCTCCAGCACTTTTTA
ACTTTATCTTTTAAAGTTTGCGCTAAAAAGAACTAAACATTAAAACGATG
AAGATCCAAAAACTAGTGGGGAGCTCAAAAAACATGACTTTTAGCCAACC
ACGTTTTTCACTTTTCACTTTATGACCTGGCTTGTATAAAAGGTGAAAAA
CTCATATGATTATTTTACTCGGTTAGGGTTAGCGTTAGGGTAGGGTAGAT
TTGAGTAAAAAAATTCGGATTTCTGATTGAAAAGAACTTTCCCAGACTCA
AAATTCTCAAATTTCCGACAAATTTTATTATTCCCTGACTCGAAATTAAA
AATCTCAAATTTCCGATAATTTTTGTTAACGACCGACCGACTCACTTTAT
AGAGCTGAAAATGACGCAAACACAAGTTATTTGTGATTGCAGCCTAGGGG
TTTTTAACAATTTCAATTAAAATTTCCATTTCGCGAAACAAATCTTTTTG
AAAAAAACTTTGAAAACTGCTTACTTTTCTTGTCAGCTGCGAAGTCAAAA
TGGTATTATGGGCCAGCGCCAGAGAAAAACATATTCCAAGAAAACCCAAT
TGTAGAGGGCCCACGGGTGAGAAGGACAAAGACAAAACAGCTGGAAGATT
GATCAGACGTAAGTTTTTTTCTTTTTTGTTTTCTTCACTGTTTGCTGATT
ATTCATTGTTGTCAGTTGTTTGCTCATCTTCTCTTGATTAACAATCATTT
TTCTTTGAGTTTCAAATTTGTATGTAGCAAGACCTTTCAATTGATTGCTT
TAATTTATTGTTCCTTAGAATGACGATACCATAGCGTCCACAGGGCTGTA
TGGCGATGGTGTTTTGAACGACTCGGTCTCGGTTCTGAGATGGAATTCTG
GAGATTTTCGAACGACATGTAAATAACGCTGACTCAAATTCAAATAGTAT
ATAAGATTTTTTAATTTGATAAAATATTTTTCTTATTCATAGTAAAGATG
ACAATTTTAAACAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055876-exon-scaffold_264-1575043694:58072..58121 | TCONS_00055876-exon-scaffold_264-1575043694:58072..58121 | Clytia hemisphaerica | exon |
| TCONS_00055876-exon-scaffold_264-1575043694:56956..57435 | TCONS_00055876-exon-scaffold_264-1575043694:56956..57435 | Clytia hemisphaerica | exon |
| TCONS_00055876-exon-scaffold_264-1510915933:58072..58121 | TCONS_00055876-exon-scaffold_264-1510915933:58072..58121 | Clytia hemisphaerica | exon |
| TCONS_00055876-exon-scaffold_264-1510915933:56956..57435 | TCONS_00055876-exon-scaffold_264-1510915933:56956..57435 | Clytia hemisphaerica | exon |
| TCONS_00055876-exon-scaffold_264-1491911889:58072..58121 | TCONS_00055876-exon-scaffold_264-1491911889:58072..58121 | Clytia hemisphaerica | exon |
| TCONS_00055876-exon-scaffold_264-1491911889:56956..57435 | TCONS_00055876-exon-scaffold_264-1491911889:56956..57435 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_264 | supercontig | scaffold_264:56956..58121 - |
Blast
The following BLAST results are available for this feature:
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