TCONS_00055834 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055834
Unique NameTCONS_00055834
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055834 ID=TCONS_00055834|Name=TCONS_00055834|organism=Clytia hemisphaerica|type=transcript|length=153bp
tgtatttaattcaattcaatttattGATGTTTTTATATCATCAAGTCTAA
TGAAAATTAGACTCGATTTTCAAAAGTATCAAGACTTTTTTGATCTCTTA
AACTAAATGACTCAATGGCATAATGgattgtactaactgcttgaccctcC
CTG
Run BLAST on NCBI

transcript from alignment at scaffold_261:28839..28991

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055834 ID=TCONS_00055834|Name=TCONS_00055834|organism=Clytia hemisphaerica|type=transcript|length=153bp|location=Sequence derived from alignment at scaffold_261:28839..28991 (Clytia hemisphaerica)
CAGGgagggtcaagcagttagtacaatcCATTATGCCATTGAGTCATTTA
GTTTAAGAGATCAAAAAAGTCTTGATACTTTTGAAAATCGAGTCTAATTT
TCATTAGACTTGATGATATAAAAACATCaataaattgaattgaattaaat
aca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035154XLOC_035154Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055834-exon-scaffold_261-1491911889:28839..28991TCONS_00055834-exon-scaffold_261-1491911889:28839..28991Clytia hemisphaericaexon
TCONS_00055834-exon-scaffold_261-1510915933:28839..28991TCONS_00055834-exon-scaffold_261-1510915933:28839..28991Clytia hemisphaericaexon
TCONS_00055834-exon-scaffold_261-1575043694:28839..28991TCONS_00055834-exon-scaffold_261-1575043694:28839..28991Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_261supercontigscaffold_261:28839..28991 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055834 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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