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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055760 ID=TCONS_00055760|Name=TCONS_00055760|organism=Clytia hemisphaerica|type=transcript|length=1432bp
tagcctctttgaaaaaaggtctataagcTAGAAAGTACATGTGCATTCAT
TAGGTTGCGAATTCAAAGACCTGATGATGAATCTCCACTTTTTAGCTTTG
CTGTGTGGACACATAGGTAACAGCCGTAAAGAAAAAAACTCAGTGTGCGC
CACTGTGTGTGGCCAATCATCTGCTTTACAAATACAGCATAGCAAAGCAA
GTGTGCAGTTGAAACGGAATTGCTCCAAACCTGCAAGAGAGCACTTAGAT
CACAGAGAGAAAAAGTTTGAAGAATATGGTTGGGGGCCGAAACTAACACC
GTGTAGAATAATTTTGTACGTCAAATCCAAAATTCAATGTCATCTTTTGC
GCCAGTATGCCAGCACCACATGACTGCGTGTCTTCCGAAGATCTTTTGCG
ACGTCGTTTACACAAAATCCATATACTGCTGGTCGTCATTTAGCGCCAAT
AATTAGAGAGCCAGTCGTTGACATTCATTATACGCAGCAATCTCATtagt
tgaaatttaaaaaagactttccGATGGAGCGTATTCTACGGAAGCCACCG
AGAAGAAGAGACCATAAGGACCACTTTTGCTTTTATTGCAGATTTCGCTG
CTCTATAGTATAATAAACATGCATGGGAAATATTCTGTCAATAAAGTGTA
TTAGATATGTGTGAGACAAGCAATTTATTGTTAGGAATGAAAAGAGAAAA
TAGGTAACTCTAGCCTGGCATAATTGTCAGCTGTCAAGGGGCGTAAAAAG
ACTGTGAGAActtttatttaaatcaaaaacaaaacacacgATTTACCAAG
CTGTCAATTTATATGCCAACTTTTATACATACATCACCATGCATTTCATG
AACAAAACTTTGTAAATATGAATCCTTGAACAATGTATTCGAAGGTATAA
TAAGGATTTTTTGAAATAGCATTGTAACTGCaattaaaatcttcaaaaaa
catttGTGACTTTACTTCTGTGACGCTACTCTCTCGAGTCGACGCCATTT
TGCTTATTGCCCTTTTGACTCGCACTATTTTATTTGTACCACCGCGCGAT
TAATACGTCAATATTAAGCGTAGTCATAAATGCACGCTTCGTGTGACAAT
AAAGAGTGATAAGAAAATATCTACGGCAACCGAATGAGACTACCTTCGCG
TTTCTTCTACTTATCACGCTGCTAGCAGACCTGCTTCAAATTCATGCTAG
TTATAAATATTCATCGAACATTGATTTCTAAAGGTTATCAAGATGCAAAC
ATGGGCTGTAGTAAACTGGAATGATGGTGGAGAAATGTCTGCAAAAGTGG
AGGAGTTGTGGACGGAAGGTGGTGCAGTGAAAGAAATTGGAAGTAAAGTC
CAAGGAAGATTCTTAAATCCAATTGTCCAAGAAAGAACAACCAACAAATA
TGTCATATCCACAGGCACAATTAAAAGTTATA Run BLAST on NCBI transcript from alignment at scaffold_258:268104..269535 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055760 ID=TCONS_00055760|Name=TCONS_00055760|organism=Clytia hemisphaerica|type=transcript|length=1432bp|location=Sequence derived from alignment at scaffold_258:268104..269535 (Clytia hemisphaerica)
TATAACTTTTAATTGTGCCTGTGGATATGACATATTTGTTGGTTGTTCTT
TCTTGGACAATTGGATTTAAGAATCTTCCTTGGACTTTACTTCCAATTTC
TTTCACTGCACCACCTTCCGTCCACAACTCCTCCACTTTTGCAGACATTT
CTCCACCATCATTCCAGTTTACTACAGCCCATGTTTGCATCTTGATAACC
TTTAGAAATCAATGTTCGATGAATATTTATAACTAGCATGAATTTGAAGC
AGGTCTGCTAGCAGCGTGATAAGTAGAAGAAACGCGAAGGTAGTCTCATT
CGGTTGCCGTAGATATTTTCTTATCACTCTTTATTGTCACACGAAGCGTG
CATTTATGACTACGCTTAATATTGACGTATTAATCGCGCGGTGGTACAAA
TAAAATAGTGCGAGTCAAAAGGGCAATAAGCAAAATGGCGTCGACTCGAG
AGAGTAGCGTCACAGAAGTAAAGTCACaaatgttttttgaagattttaat
tGCAGTTACAATGCTATTTCAAAAAATCCTTATTATACCTTCGAATACAT
TGTTCAAGGATTCATATTTACAAAGTTTTGTTCATGAAATGCATGGTGAT
GTATGTATAAAAGTTGGCATATAAATTGACAGCTTGGTAAATcgtgtgtt
ttgtttttgatttaaataaaagTTCTCACAGTCTTTTTACGCCCCTTGAC
AGCTGACAATTATGCCAGGCTAGAGTTACCTATTTTCTCTTTTCATTCCT
AACAATAAATTGCTTGTCTCACACATATCTAATACACTTTATTGACAGAA
TATTTCCCATGCATGTTTATTATACTATAGAGCAGCGAAATCTGCAATAA
AAGCAAAAGTGGTCCTTATGGTCTCTTCTTCTCGGTGGCTTCCGTAGAAT
ACGCTCCATCggaaagtcttttttaaatttcaactaATGAGATTGCTGCG
TATAATGAATGTCAACGACTGGCTCTCTAATTATTGGCGCTAAATGACGA
CCAGCAGTATATGGATTTTGTGTAAACGACGTCGCAAAAGATCTTCGGAA
GACACGCAGTCATGTGGTGCTGGCATACTGGCGCAAAAGATGACATTGAA
TTTTGGATTTGACGTACAAAATTATTCTACACGGTGTTAGTTTCGGCCCC
CAACCATATTCTTCAAACTTTTTCTCTCTGTGATCTAAGTGCTCTCTTGC
AGGTTTGGAGCAATTCCGTTTCAACTGCACACTTGCTTTGCTATGCTGTA
TTTGTAAAGCAGATGATTGGCCACACACAGTGGCGCACACTGAGTTTTTT
TCTTTACGGCTGTTACCTATGTGTCCACACAGCAAAGCTAAAAAGTGGAG
ATTCATCATCAGGTCTTTGAATTCGCAACCTAATGAATGCACATGTACTT
TCTAgcttatagaccttttttcaaagaggcta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055760-exon-scaffold_258-1491911889:268104..269535 | TCONS_00055760-exon-scaffold_258-1491911889:268104..269535 | Clytia hemisphaerica | exon |
| TCONS_00055760-exon-scaffold_258-1510915933:268104..269535 | TCONS_00055760-exon-scaffold_258-1510915933:268104..269535 | Clytia hemisphaerica | exon |
| TCONS_00055760-exon-scaffold_258-1575043694:268104..269535 | TCONS_00055760-exon-scaffold_258-1575043694:268104..269535 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_258 | supercontig | scaffold_258:268104..269535 . |
Blast
The following BLAST results are available for this feature:
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