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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055751 ID=TCONS_00055751|Name=TCONS_00055751|organism=Clytia hemisphaerica|type=transcript|length=803bp
CAAACACCTTCAGATCCATCGACAGTTCTTACCACAATGTTGGAGGCAGA
GAGAGTTACCAACAATGCAGGCCAGGTTATCACTGTATTTACCGCTGACC
AACAGCTTTATCGAGTTGTGTTGGACGTTATTTGGACAGGTCCAGAAAGA
TTTAGCAATTTCGTGCCTAGAATCTGTGGAATGAACTGGATCATGAGTTT
TATTGGAAGTATCGGGATCTTAATGCAGAATAGTGGTTTGCTTCCTTGGT
TGAAAAGTGCCTTTGGTGGTGTGGAGAAAATGCTACTTGGCAAGAAATTC
CCCATGAACGTAAGGGCGCTAAGATTCGCTATGCTAGAAATTCTGAGAGG
TCCCGTAGAACATTTGGATTCGTTCGTTGCTTTCACCGAATTCCTTGAAT
CCTTTTGTACAGAAAATAAGCAGGAGGAGAATGAAAACGAGGAGAATGAA
AAAGAGGAGGATgagaatgaagaagaaaacaaactTACGAAACACTGGGT
CGTAAACTTCATTAAACCAGTGCTACTAATACACCTATATATTCGAGCCG
AACGTGAAGGTGACTTTGCACTCCACCTATACACATGCCACAAAATAATG
CCTTATTTCTTTGCATCGGGTCATATGAATTATGCTTGTTATGGAATCTG
TTACCTCAGAACTCTGCATAAACTTCCAAAATGTATTCTAGAAGCTTTCA
TGAGAGGAGAGCCTGTCATGCGACATCAAGATGGAATATGGAACGGAATT
TGGAGTGATATGATGATCGAAACGACGTATATGAGGTATGGTAAAGGACC
TGG Run BLAST on NCBI protein sequence of TCONS_00055751-protein >TCONS_00055751-protein ID=TCONS_00055751-protein|Name=TCONS_00055751-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
QTPSDPSTVLTTMLEAERVTNNAGQVITVFTADQQLYRVVLDVIWTGPER
FSNFVPRICGMNWIMSFIGSIGILMQNSGLLPWLKSAFGGVEKMLLGKKF
PMNVRALRFAMLEILRGPVEHLDSFVAFTEFLESFCTENKQEENENEENE
KEEDENEEENKLTKHWVVNFIKPVLLIHLYIRAEREGDFALHLYTCHKIM
PYFFASGHMNYACYGICYLRTLHKLPKCILEAFMRGEPVMRHQDGIWNGI
WSDMMIETTYMRYGKGP Run BLAST on NCBI transcript from alignment at scaffold_258:139210..140012 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055751 ID=TCONS_00055751|Name=TCONS_00055751|organism=Clytia hemisphaerica|type=transcript|length=803bp|location=Sequence derived from alignment at scaffold_258:139210..140012 (Clytia hemisphaerica)
CCAGGTCCTTTACCATACCTCATATACGTCGTTTCGATCATCATATCACT
CCAAATTCCGTTCCATATTCCATCTTGATGTCGCATGACAGGCTCTCCTC
TCATGAAAGCTTCTAGAATACATTTTGGAAGTTTATGCAGAGTTCTGAGG
TAACAGATTCCATAACAAGCATAATTCATATGACCCGATGCAAAGAAATA
AGGCATTATTTTGTGGCATGTGTATAGGTGGAGTGCAAAGTCACCTTCAC
GTTCGGCTCGAATATATAGGTGTATTAGTAGCACTGGTTTAATGAAGTTT
ACGACCCAGTGTTTCGTAagtttgttttcttcttcattctcATCCTCCTC
TTTTTCATTCTCCTCGTTTTCATTCTCCTCCTGCTTATTTTCTGTACAAA
AGGATTCAAGGAATTCGGTGAAAGCAACGAACGAATCCAAATGTTCTACG
GGACCTCTCAGAATTTCTAGCATAGCGAATCTTAGCGCCCTTACGTTCAT
GGGGAATTTCTTGCCAAGTAGCATTTTCTCCACACCACCAAAGGCACTTT
TCAACCAAGGAAGCAAACCACTATTCTGCATTAAGATCCCGATACTTCCA
ATAAAACTCATGATCCAGTTCATTCCACAGATTCTAGGCACGAAATTGCT
AAATCTTTCTGGACCTGTCCAAATAACGTCCAACACAACTCGATAAAGCT
GTTGGTCAGCGGTAAATACAGTGATAACCTGGCCTGCATTGTTGGTAACT
CTCTCTGCCTCCAACATTGTGGTAAGAACTGTCGATGGATCTGAAGGTGT
TTG Coding sequence (CDS) from alignment at scaffold_258:139210..140012 >TCONS_00055751 ID=TCONS_00055751|Name=TCONS_00055751|organism=Clytia hemisphaerica|type=CDS|length=801bp|location=Sequence derived from alignment at scaffold_258:139210..140012 (Clytia hemisphaerica)
AGGTCCTTTACCATACCTCATATACGTCGTTTCGATCATCATATCACTCC
AAATTCCGTTCCATATTCCATCTTGATGTCGCATGACAGGCTCTCCTCTC
ATGAAAGCTTCTAGAATACATTTTGGAAGTTTATGCAGAGTTCTGAGGTA
ACAGATTCCATAACAAGCATAATTCATATGACCCGATGCAAAGAAATAAG
GCATTATTTTGTGGCATGTGTATAGGTGGAGTGCAAAGTCACCTTCACGT
TCGGCTCGAATATATAGGTGTATTAGTAGCACTGGTTTAATGAAGTTTAC
GACCCAGTGTTTCGTAagtttgttttcttcttcattctcATCCTCCTCTT
TTTCATTCTCCTCGTTTTCATTCTCCTCCTGCTTATTTTCTGTACAAAAG
GATTCAAGGAATTCGGTGAAAGCAACGAACGAATCCAAATGTTCTACGGG
ACCTCTCAGAATTTCTAGCATAGCGAATCTTAGCGCCCTTACGTTCATGG
GGAATTTCTTGCCAAGTAGCATTTTCTCCACACCACCAAAGGCACTTTTC
AACCAAGGAAGCAAACCACTATTCTGCATTAAGATCCCGATACTTCCAAT
AAAACTCATGATCCAGTTCATTCCACAGATTCTAGGCACGAAATTGCTAA
ATCTTTCTGGACCTGTCCAAATAACGTCCAACACAACTCGATAAAGCTGT
TGGTCAGCGGTAAATACAGTGATAACCTGGCCTGCATTGTTGGTAACTCT
CTCTGCCTCCAACATTGTGGTAAGAACTGTCGATGGATCTGAAGGTGTTT
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055751-exon-scaffold_258-1491911889:139210..140012 | TCONS_00055751-exon-scaffold_258-1491911889:139210..140012 | Clytia hemisphaerica | exon |
| TCONS_00055751-exon-scaffold_258-1510915933:139210..140012 | TCONS_00055751-exon-scaffold_258-1510915933:139210..140012 | Clytia hemisphaerica | exon |
| TCONS_00055751-exon-scaffold_258-1575043694:139210..140012 | TCONS_00055751-exon-scaffold_258-1575043694:139210..140012 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_258 | supercontig | scaffold_258:139210..140012 . |
Blast
The following BLAST results are available for this feature:
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