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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055733 ID=TCONS_00055733|Name=TCONS_00055733|organism=Clytia hemisphaerica|type=transcript|length=182bp
CCGAGGGAAGGGAGTTTCGATATGACTACAATGATTGTAACTTATTCCGG
AGAAAGCAGGACGAGTTCAAGAAATACAGAAAGCCACTACTAAAGAGCGA
TCTGTCTGCCAGCAAAGAAGAAGGACAAATTATCGAAAAAGAGAATTTAA
ATCCAGATGTAGTTCCACCAACTCCAGAGAAG Run BLAST on NCBI transcript from alignment at scaffold_258:231217..232075- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055733 ID=TCONS_00055733|Name=TCONS_00055733|organism=Clytia hemisphaerica|type=transcript|length=859bp|location=Sequence derived from alignment at scaffold_258:231217..232075- (Clytia hemisphaerica)
CCGAGGGAAGGGAGTTTCGATATGACTACAATGATTGTAACTTATTCCGG
AGAAAGCAGGTATTTGAGGCATTGCTACTAAATTAAGTTGATTTTTCCTA
AATTTTAAAATTTCCTTAACTTTTCATTCTAAATTCTTACAAAGGAGGTC
ACGCCAAATTAAAAAAAGACGTTTAACCATTTCAAATTCCTAACTTATCN
CAAAGGAGGTCACGCCAAATTAGAAAAAGACGTTTTACCATTTCAAATTC
CTAACTTATCGATTTCTATGCCTCTGGTCTTGATTCAAACCTTTCCCTCC
TATTCATAGGACGAGTTCAAGAAATACAGAAAGCCACTACTAAAGAGCGA
TCTGTCTGCCAGGTATTATTTTAAGAGTTATAATTTGATTTTTTATTCAT
TTTCAATCAGATTCAATCAAAAGTCTTAATTATCACTGAAACTTCCAGAT
TTTAAATTTTTTAAACGTAGATAGGTTTTGACATGATATTTAGATTGCTA
ATAAAACCTTTTTTTTCGTTGCAGCAAAGAAGAAGGACAAATTATCGAAA
AAGAGGTATTTTGATATTGTATTACCAATTACATCCACTTTTAACGAATT
ATCGTTATTGTATAGATTGCTATACCCCGATTTTCATTATTCATTACCGA
GGTCAAAATATTAACCTCAAGGTCATGTGAATATTAATTCCAAAGTAACC
TCTGTTAATATTAAATATCAAAGTCCAGCATTGATTATTACACCTACCTA
TTCTCAGCAGACCCATGATTTATCTTTTAATCCAATTATTTCAGTATCAT
TCTTATTTGATTCAATTTAGAATTTAAATCCAGATGTAGTTCCACCAACT
CCAGAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055733-exon-scaffold_258-1575043694:232017..232075 | TCONS_00055733-exon-scaffold_258-1575043694:232017..232075 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1575043694:231714..231766 | TCONS_00055733-exon-scaffold_258-1575043694:231714..231766 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1575043694:231521..231551 | TCONS_00055733-exon-scaffold_258-1575043694:231521..231551 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1575043694:231217..231255 | TCONS_00055733-exon-scaffold_258-1575043694:231217..231255 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1510915933:232017..232075 | TCONS_00055733-exon-scaffold_258-1510915933:232017..232075 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1510915933:231714..231766 | TCONS_00055733-exon-scaffold_258-1510915933:231714..231766 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1510915933:231521..231551 | TCONS_00055733-exon-scaffold_258-1510915933:231521..231551 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1510915933:231217..231255 | TCONS_00055733-exon-scaffold_258-1510915933:231217..231255 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1491911889:232017..232075 | TCONS_00055733-exon-scaffold_258-1491911889:232017..232075 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1491911889:231714..231766 | TCONS_00055733-exon-scaffold_258-1491911889:231714..231766 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1491911889:231521..231551 | TCONS_00055733-exon-scaffold_258-1491911889:231521..231551 | Clytia hemisphaerica | exon |
| TCONS_00055733-exon-scaffold_258-1491911889:231217..231255 | TCONS_00055733-exon-scaffold_258-1491911889:231217..231255 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_258 | supercontig | scaffold_258:231217..232075 - |
Blast
The following BLAST results are available for this feature:
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