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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055726 ID=TCONS_00055726|Name=TCONS_00055726|organism=Clytia hemisphaerica|type=transcript|length=1222bp
agTGGCTGAAAGACACATTCCTTGCGTACTTCAATGATTGGGAGAAGGCT
ACCAAAAAGCTCAAACTACCTGCAAAAGAGCAAGCAAAACATTGCATCAG
TCAGGCTACTCTGAATGGTCTCAGAATCACAGGTAAAAATAAACACGAGT
TTTAACTTGTCCTTTTAATTGAAAGTAGTCTTAAGTGCGTAAGTATATGA
TACTTCTCCAATTCTAGCGTTGCTTAGGCGAGATTCTAGTTGTTTTTGGA
TATACGAATGGTAACGAAggaaacaatgtttttgtttgaaaataagTGAC
CACAACTCTGCTATTCATGTTGATTGCCCATTCTCAATTATattcctagt
ctacttcacttgagtcagcgtcatcaaaaattatcaaaaagttcgGCCAA
ACTAGTCTCTGGTCTAGGGTATCCATacatacaaaaaatgaaaactacCT
AAGTCATACATAATTCTCAATGTCAAGATGACAAAATTTAGCTTTATCAA
TGATTGGTTTATTAATACCTGGATCAAGTACAGTCATTGAACCGTGTAAA
GAACTGTCAAATCTTACCCAAATTAAAccccaaaatcaaaatatatgtTA
CTGTAcaatactttttttattcagTGCATTCTTTCTGCGAGATGGTCCCA
GAATTACTCAGAATGGAAGGTGTCAAATATTTCTTATCTGAAAAGTTGAA
TCAAGACCCTGTCGAGGAGCATTTTTCGAAACACAGGGCTAAAGGTGGTG
TCGAAAACCCTCAATTAGAGCAATACATGATGACTGAGCGAAAAATGATT
GTTGCAAAGTCAAAATGATCGTCGCAATAAATGGTAACTTCCGTGGTAGA
ACCAAACGAAAGATTGTTATTGACATTGACGACAAAACTTTACTACCAAA
GCGTCCAAAAGTACCAAAGAAATCAAATGAACAAAAACATTCATGAATAC
TATTTATACTATGGAATTATTTTGTATCGTATATATTGTGTCAGATGGTT
TATAAATCCtgtttttctgttgtttttttttctttgattttaacATACCT
ACATacagaaaaaataaaacgtgcacaGAGAAGGATTAGAATTTTTAAGA
GGTCAATAAGGTCCACAAGGCATAATgaacaaatttctagtttctttgtt
tttatcatatatttttgttgaaaatattgTATAAATTTTCCACGGTATTC
TAGTACTATATATAGTTTGTCG Run BLAST on NCBI transcript from alignment at scaffold_258:190662..191883+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055726 ID=TCONS_00055726|Name=TCONS_00055726|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at scaffold_258:190662..191883+ (Clytia hemisphaerica)
agTGGCTGAAAGACACATTCCTTGCGTACTTCAATGATTGGGAGAAGGCT
ACCAAAAAGCTCAAACTACCTGCAAAAGAGCAAGCAAAACATTGCATCAG
TCAGGCTACTCTGAATGGTCTCAGAATCACAGGTAAAAATAAACACGAGT
TTTAACTTGTCCTTTTAATTGAAAGTAGTCTTAAGTGCGTAAGTATATGA
TACTTCTCCAATTCTAGCGTTGCTTAGGCGAGATTCTAGTTGTTTTTGGA
TATACGAATGGTAACGAAggaaacaatgtttttgtttgaaaataagTGAC
CACAACTCTGCTATTCATGTTGATTGCCCATTCTCAATTATattcctagt
ctacttcacttgagtcagcgtcatcaaaaattatcaaaaagttcgGCCAA
ACTAGTCTCTGGTCTAGGGTATCCATacatacaaaaaatgaaaactacCT
AAGTCATACATAATTCTCAATGTCAAGATGACAAAATTTAGCTTTATCAA
TGATTGGTTTATTAATACCTGGATCAAGTACAGTCATTGAACCGTGTAAA
GAACTGTCAAATCTTACCCAAATTAAAccccaaaatcaaaatatatgtTA
CTGTAcaatactttttttattcagTGCATTCTTTCTGCGAGATGGTCCCA
GAATTACTCAGAATGGAAGGTGTCAAATATTTCTTATCTGAAAAGTTGAA
TCAAGACCCTGTCGAGGAGCATTTTTCGAAACACAGGGCTAAAGGTGGTG
TCGAAAACCCTCAATTAGAGCAATACATGATGACTGAGCGAAAAATGATT
GTTGCAAAGTCAAAATGATCGTCGCAATAAATGGTAACTTCCGTGGTAGA
ACCAAACGAAAGATTGTTATTGACATTGACGACAAAACTTTACTACCAAA
GCGTCCAAAAGTACCAAAGAAATCAAATGAACAAAAACATTCATGAATAC
TATTTATACTATGGAATTATTTTGTATCGTATATATTGTGTCAGATGGTT
TATAAATCCtgtttttctgttgtttttttttctttgattttaacATACCT
ACATacagaaaaaataaaacgtgcacaGAGAAGGATTAGAATTTTTAAGA
GGTCAATAAGGTCCACAAGGCATAATgaacaaatttctagtttctttgtt
tttatcatatatttttgttgaaaatattgTATAAATTTTCCACGGTATTC
TAGTACTATATATAGTTTGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055726-exon-scaffold_258-1491911889:190662..191883 | TCONS_00055726-exon-scaffold_258-1491911889:190662..191883 | Clytia hemisphaerica | exon |
| TCONS_00055726-exon-scaffold_258-1510915933:190662..191883 | TCONS_00055726-exon-scaffold_258-1510915933:190662..191883 | Clytia hemisphaerica | exon |
| TCONS_00055726-exon-scaffold_258-1575043694:190662..191883 | TCONS_00055726-exon-scaffold_258-1575043694:190662..191883 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_258 | supercontig | scaffold_258:190662..191883 + |
Blast
The following BLAST results are available for this feature:
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