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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055593 ID=TCONS_00055593|Name=TCONS_00055593|organism=Clytia hemisphaerica|type=transcript|length=909bp
CAGCACTCTTTTGGACTTTGGGTTAATTGATAATGTGAAGGCAAGTGGAA
ACTTTCTACGTACCATTGATGCAAAGCCCCTCACGCATAATTGATCTTCA
TATTGTTCGCATAGTATAACACCCTGCTGGTAGGAGATAGTCACCATAAG
TTTAACTTGCTTTGAGCCTTCCTTCTTACCCTTTGCGGTACAACCGTAGG
TAAGGCCCTCATCCGTTCGTCTCCACTCTCGGACACTTGTTGTCCTGGCC
TGGTCCAACGGATTTTTCATATAAATAAAACCAATTGCATCTAAAAAGAA
GCTTATTCCTTTCTTCCGAAATTCACCAAGTCCGAGCTTCTTCAAACAGC
TTCAAATGTTTCGCAAATCTCAGCCAAGTCTTAAGATCCTTCTGCTTTAG
TATTCCCTTTCTTCGTGTACTTTGATATTCGCAACCAATGTGCTTTAAAT
GACGCCTGTTTGGCTTGAGGCCGTTGGTAACGATGGCTGCAATCGCTTTG
AAGTGATAATGCCCTCAAAATCGCGCAGGACTTTTATCTGTCGTCTAACT
ACGCGATAATCTCGTTTGTTTCGAAGAGGTGGTCTATCGGGGTTGTTTAT
CCTTTTGTCGTCGGGATCCTCTCCATTAAGTGACTTCGTGATGTGTGATA
GTACACCCACAGTGCATTGAAAGCTTGACCCAATAGTGTCACCGTCATGT
CTATCAGGTGTGAACAGTCCTTTGATGTTTTATATGCTCAGTACTTGCTC
ACTCAAATCTTTCTCCTCCATCTGTGAGGTTTGTTCAATGACCCGATCCT
TTTGGCTTTCAAGAAATTCCCAAACTCGGGAGAGTGGACCAAGCACGTTT
GAAATCTTTTCTTGAAGTGACGTGAAGGCTTTGTCTAAATGAGAGAGTTC
ATATTCGAG Run BLAST on NCBI transcript from alignment at scaffold_253:230630..231538 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055593 ID=TCONS_00055593|Name=TCONS_00055593|organism=Clytia hemisphaerica|type=transcript|length=909bp|location=Sequence derived from alignment at scaffold_253:230630..231538 (Clytia hemisphaerica)
CTCGAATATGAACTCTCTCATTTAGACAAAGCCTTCACGTCACTTCAAGA
AAAGATTTCAAACGTGCTTGGTCCACTCTCCCGAGTTTGGGAATTTCTTG
AAAGCCAAAAGGATCGGGTCATTGAACAAACCTCACAGATGGAGGAGAAA
GATTTGAGTGAGCAAGTACTGAGCATATAAAACATCAAAGGACTGTTCAC
ACCTGATAGACATGACGGTGACACTATTGGGTCAAGCTTTCAATGCACTG
TGGGTGTACTATCACACATCACGAAGTCACTTAATGGAGAGGATCCCGAC
GACAAAAGGATAAACAACCCCGATAGACCACCTCTTCGAAACAAACGAGA
TTATCGCGTAGTTAGACGACAGATAAAAGTCCTGCGCGATTTTGAGGGCA
TTATCACTTCAAAGCGATTGCAGCCATCGTTACCAACGGCCTCAAGCCAA
ACAGGCGTCATTTAAAGCACATTGGTTGCGAATATCAAAGTACACGAAGA
AAGGGAATACTAAAGCAGAAGGATCTTAAGACTTGGCTGAGATTTGCGAA
ACATTTGAAGCTGTTTGAAGAAGCTCGGACTTGGTGAATTTCGGAAGAAA
GGAATAAGCTTCTTTTTAGATGCAATTGGTTTTATTTATATGAAAAATCC
GTTGGACCAGGCCAGGACAACAAGTGTCCGAGAGTGGAGACGAACGGATG
AGGGCCTTACCTACGGTTGTACCGCAAAGGGTAAGAAGGAAGGCTCAAAG
CAAGTTAAACTTATGGTGACTATCTCCTACCAGCAGGGTGTTATACTATG
CGAACAATATGAAGATCAATTATGCGTGAGGGGCTTTGCATCAATGGTAC
GTAGAAAGTTTCCACTTGCCTTCACATTATCAATTAACCCAAAGTCCAAA
AGAGTGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055593-exon-scaffold_253-1491911889:230630..231538 | TCONS_00055593-exon-scaffold_253-1491911889:230630..231538 | Clytia hemisphaerica | exon |
| TCONS_00055593-exon-scaffold_253-1510915933:230630..231538 | TCONS_00055593-exon-scaffold_253-1510915933:230630..231538 | Clytia hemisphaerica | exon |
| TCONS_00055593-exon-scaffold_253-1575043694:230630..231538 | TCONS_00055593-exon-scaffold_253-1575043694:230630..231538 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:230630..231538 . |
Blast
The following BLAST results are available for this feature:
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