TCONS_00055559 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055559
Unique NameTCONS_00055559
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5728

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055559 ID=TCONS_00055559|Name=TCONS_00055559|organism=Clytia hemisphaerica|type=transcript|length=5728bp
TAAAAAGTAATAGTTCAACAAGTACAAGAGATTTTCTTTAATGTGATATG
GATAACTATGGCCTAGCACAAAGATGAGTATGATACAATCAAGGGGATCT
GAGATGAACCATCTCAAAGAGCAAGCACAGAAGGAACGACTTAAGTTAGC
TTCTGCACAAGCTGCTATAACCTCTTATACAtGCCCTGATGAATTAAAGA
TCAACCTACAGCCAAGAAAGagaGACGATTTTCTTTCATCAAGCATCAAG
caTGTACTTGGTGACCATAGAATATTCATAAAACATTTGAAGTCCACGAC
AGCATATAATCCGTTGCTCGGTTTGGATGATACTGACCCTTCTGCAACTC
CTGATATCAAAATTGGAGATCTCCTCACCAAGAATGGTATTTCTGACTTG
CTGAAACAACCTGTCGAAGGGAAAAATGGTGGGTCATCAGCAAAGCAAAC
ATCTCAACGTGGTGGCCGTAAAAATTCACGATCATCCTCAGATGGTGGTA
AAAAGCAGAAAGAAAAGCCCTCGCCTGTCAAGAAAACACCAATCAAAGAG
AAACAGTTGAAAAGTCCAGCAAAACCTAAACCACCTCATATACAAATACC
AAAAGCTATGAATAATAAAAAGAGCTCAAAATCAAAAGCAAAGATTGAAA
GTATCTTAAAAGAGATGACTCGGCTTGATCCACCATTGACTGAAATCAAA
ACACCACACAAAGATCAAGATGAATTCAAATATCCTGCCTTGCCTCCCAC
ATCTAAGggaaagaaaaaagaggcagcaaagaaaaaagaggcAGTGAAAA
ATAAGACAGAGAAAACCAAGACAGAAACTATTAAAAAGGAAGAGAATAAA
AATGCTTCTAAAAATCCCATGAAATTGCAAGGTACGAGGCTCAGTGAAGA
TGAACCGAAACCAGTTAAAGAAAAGaaaaaaccTGATCGCCGAAAATCTG
TATCAACAGTTGTCAATCAGATGAAGACAAAGAAAGTTTCAATGTCATCA
GATTCTTCATCAAGCGATGATGATGATAGCAGTTCAGGAAGCTCTGGATC
AGGAAGTTCTTCAGACTCTGATGATAATGAACCGTCAGCTCCAGATAAGA
AGccaaATACAAACAAAGAAGCTGACCCACCAGACAAGATAAAAAAGGAA
TTGCCAAGCAACAATAATAATTATCTAACAGAAATTCCAATTGGCGTTAA
TGATAATACCACAAACATGATGGGTTTGAAGTTCCCCGAAAAATCCAAAG
AAATGAATCTGACATCGGTAGCGGTGAAAGAAGAAAACACAGGACTGATG
AAGGGAGCTAGTAATGGTTTAGACTTGATGGACATTAATTCGCATCCATT
TACCTTGGGCTTTTCACTTGGATCATCCCCTGAAAAACCTATTAGTCCTT
TAGACAACATGAACAGTGACATGAAGTTGTTTGAGGACATTGATAATTTT
CCAATTGCAAATTCACATGATAATTTCACGGTTGACGATTTGATTGGTAA
AGAGTTGTCTGATCTTGAAAAAGATACGACTACTAATACTTCAATGAGCG
AGTCCGAAGACCGAAGTGCATTTGATTCTTTCCAACAGAGTGACATTAAT
GATTCTCTTGTGTTGCACAAAAAGAACAATTTGTACAGTAAAGACAGCAA
AAAAGCTGAAAGTCAACAAAATGACTTGAATAATAAAAACTCTACTTTAT
CACAAGATAAAAAGACTGACCAACGCAATAAACTATCTTCAAAAAGTAAC
GAAACTAAGGACAAATCAAAGAGTAAAAATACAAGGATAGAGGGTATGAA
CACGGCTTCAGCATCTGTAAAAGTGAACTCTGGTTCTAATGGTGGCCAAC
CATTCAAAACGAAAGCTCAGTTAAAGATGCCCGTAGCTGATAATACTAAT
AAAGAGACTGAAAAACCTAAAAGTGTTGGAAAAACTAGGCGGCAATCGTC
AAGGTCTTCTGTTcgaaataaagataaaaaagaaaaacaatctaCTACAA
GCTGTAAAGGTAGAGAAAGCTTAACGAAAGAGCCTGAAAAGGCTAAAGTT
ATTGAACAATCTGAGGATGATGTTTTTGGTAGTATTTCTGAATCGTCTGA
AGCAATGGATACTACAGATAGTACTCCGAAAAAGTTATCTTTATCCAAAC
CGCCTGCTCAAAAGGACGAAAAACCTGTAATCCCTAAACCTGAACCAATT
AAAATGAGTAGATCAAGTTTGATAGCCAATGATATGAAAGAGATCTTTTC
TGGACTTCCATTAGAGCCACCAAAATCGATCTTTGACGATGATAGCGATT
TCTTCGAACAAAGGTTAAATACAACCATACAAGGTATCATAAGCCCTATT
GATTCTTCACCCAATATCTCCAACTTTGGTTTAACACCTACCCCAACCAC
ACAGAATGACGTCACAACAGTTTCTGCTCTTGTGACAACTTCTTCACCCT
TTGCAGCATCAGCTTTAACTACTACGAACACGACATCTGGCTTGCTTTCT
TTTACTCAAGATATACCTCCTCCTCTCACCACTATCACCACTTCAAGTTC
CAATGAAACTATATTACCTAAACCTATTGCATCACAATCTGGCTCGTGTA
AACCGGTAGAAAGTTTGAAGGAAGAAATCAAAACCTCTCCAACTACAGCT
CCAACTCTCGCCACCAATTTTTCAGCCCCAGCTCTCCTCACCAATCTTCC
AGCCAGTCTCGATTTGCATGAAGAAAAGCCAGAGCCAAAACTAGAAGATA
CTAATATACCTTTGCAGTCGCAAGCCCGACCTCTTCCTCCAATTGCACCT
GTACCTCAAACTAAACCAGATAATCTGCTATCACCTCCTACAACTACGAC
AATCTCGTTGCAAGAGCCACCACTGATCACTACAACCTTCAGTCATCCTC
GTGATGTGACTTCAGCAGTACCGTCAACCGTTAACGCTATCCTAACGAGG
ACAACCAGCATTGACGCACCACCGTTTGATCATATTTCAACAATGATACC
GAATGGACCTCCTCCACCCTACTCAATGAACAGTAATATGAATCAGCTTC
AACACTTTTCAAACCAACAATCTTCTCAGAAGCAACAACCGCCTGTTAAT
ATGTTACAGGATCAGCAATTTAAACAACAGCAACCACATTTGAATATGAA
CTTGAATANTCATCAGCTTTAACTACTACGAACACGACATCTGGCTTGCT
TTCTTTTACTCAAGATATACCTCCTCCTCTCACCACTATCACAACTTCAA
GTTCCAATGAAACTATATTACCTAAACCTATTGCATCACAATCTGCCTCG
TGTAAACCGGTAGAAAGTTTGAAGGAAGAAATCAAAACCTCTCCAACTAC
AGCTCCAACTCTCGCCACCAATTTTCCAGCCCCAGCTCTCCTCACCAATC
TTCCAGCCAGTCTCGATTTGCATGAAGAAAAGCCAGAGCCAAAactaaaa
aacactaaaataccTTTGCAGTCGCAAGTCCAACCTCTTCCTCCAATTGC
ACCTGTACCTCAAACTAAACCAGATAATCTGCTATCTCCTCCTACAACTA
CGACAATCTCATTGCAAGAGCCACCACTGATCACTACAACCTTCAGTCAT
CCTCGTGATGTGAATTCAGCAGTACCATCAACCGTTAACGCTATCCTAAC
AAGGACAACCAGCATTGACGCACCACCGTTCGATCATATTTCAACAATGA
TACCGAATGGACCTCCTCCACCCTACTCAATGAACAGTAATATGAATCAG
CTTCAACACTATTCAAATCAACAACCTTCTCAGAAGCAACAACAACCTGT
TAATATGTTACAGGATCAGCAATATAAACAACAGCAACCACATTTGAATA
TGAACTTGAATACTCGGAATGATATGAATGCACTTAATTTCCACCAACAA
ATTCCTCCACCATACACACATCACCCAGGCATGGGATTCCCACCAACTAC
CAATAACTCCTTTCCACCAACAACCAACCCTGCGTTCCCTCACATGTCTC
AAATTCCTCCTCCGATGGTGAATTTGAACCATCATAATAGACTGCAGCAA
CCAATACATTTTAATCACGAACAGTCTTtagatttttcatcaaaacaacc
tcaacaacaacaacagacatTGTTACCAGAATCCAATAAACCCTCAAATA
ATTCTTTAAAACCTCAGGCCACTGTACCTCCTCTGAATTTCAATCGTGGG
CAACCTCCAGTTAATCCATCAGACAATATGGAATTGAACTTTACTCCGTC
AGCTCCAATGACAAGCACCAATAAtatgcaacaacaacaacaacagcagc
aCCATAACANTACATTCCCTTCCAGGTATACCTCATCCACAATCAGTTCA
TGGTATGCCACCTACCCACACTATGAGTAATGCGCATCCTCCTCAAGCGG
TTCCTGGTATTCATCCTCCTCCAACAACTACCACTGTTTTGCCTCCTCCT
CATATTGCAACTAAACCACCAATGCAGACATTACATAACAGCTCTACTTC
TAATTTTCAACCGATTCCAAACAACAGTGTATTTGCAGCTGTACCACCTA
CCACAACTCCAGGTATACCACCTCTGATAAGTGACCAGCAACAACAACCG
CTACCAAATAAACCTGCAGTAGTCTCTCATCCACCAACAAATAACACACA
ACCTTCACTACCACCGACAAGTAGTTTGGCAGGTGCAACATCCTTTCAGC
CAATATCTTCTGCCCAACAACCACCATCTGCTCAACAACATCAACCTCTA
CAGGAAGTGAAACCAGAGCCAATTGAAGCCAGTTTGGATCTCCTTGGGTC
CAGTCAACCGGTTCTTGATTCTCAAGTCCAACCACCATCAGTCTCCACGA
CAGACGATGTTATAGTAACACGTGTCAAAGAACCATCCAAGCAAAGTCGC
AGAAACAGTGTTGTGAAGCAAGAACCTATAGAGCAACCTTCTCCTATTCC
ACAGTCTGTTTTGGAAACAGAAAAGAGAGATACGCCAAGTCCTGGTAATT
GTTTCGATGTGTTCAACCAAATAAATGATATGACAACACAAAACAACGCA
AAAGAAATTGTCGTCAAGGAAATTGCCGTCAAAGAAATTGCCGTCAAAGA
GCAACCAAAACGTTTGTTAGTGAAGATTCCTTTGAATCTTGTAAAGCTGA
AACGTCAATCAAATAAGGAATCGCCCGCCGTTGGTGAAGATATGGAGATT
GATATCCTTGGAGATGATTCCCCGTTGAAGAGGAAGAATCCCCGTGCTGT
GAATGGTGGTACAGATCGAAAGGTGGCACGTATCGAATCTAGTGATCAAG
AAGATGAAGCTCAATCAAAACCAACAAAGAGTTTGGTCGTCCGCATCAAT
CTGAACAGACTGAAACGTGTACCTAAGGGTAATGGAAAAGGCAACACGGA
TGAGCTGGAAACTGACGTCTCTGCCAAAAAGAAACGAGAACGCTATCAAA
CTACAAAAGAAAAGACTGTTCCAACTGTTCGAACTGCTGTCGTTGATCAA
AGTATGTGTACTGTCTGTGCTACGCAGAAGTACAACAGCCGAGATCCGAA
ACGACTAGCCACGTAAGTATATAACCACAAGCCACACACGGTGATCTGTG
CTTTTTGAAATTCGTCATTCTTCCGCCAAGAGATTTTTAGAATAAAGACG
AAATAACGGATTTTTTCCAGTTGGAATAATACTTCAGTTCTCTAATAGTA
ATGGGGATAAAACTTGGTTGGACTTCTG
Run BLAST on NCBI

transcript from alignment at scaffold_253:1085487..1094963-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055559 ID=TCONS_00055559|Name=TCONS_00055559|organism=Clytia hemisphaerica|type=transcript|length=9477bp|location=Sequence derived from alignment at scaffold_253:1085487..1094963- (Clytia hemisphaerica)
TAAAAAGTAATAGTTCAACAAGTACAAGAGATTTTCTTTAATGTGATATG GATAACTATGGCCTAGCACAAAGATGAGTATGATACAATCAAGGTTAATT TGTTGTTGTTTTTTACCAGCAGTTTTTTATTGCCAAAAGAAAATATTGAT CTCTTTGTAATTCTGCCTAGGTTTTGGGCAAAAGAGTTATTTTTTTTGTT CTTTGTCAATTACTACAAGGCATATAATTTTGTTTGTTCCTTCATTTATA GGGGATCTGAGATGAACCATCTCAAAGAGCAAGCACAGAAGGAACGACTT AAGTTAGCTTCTGCACAAGCTGCTATAACCTCTTATACAGTGAGTATACT CATTACTTTGAATGTTCCTTTCTATGAGACAACTTCTAAAAAGGGGTTAG GAAAGTTTATTGTAAAAGGGGAGACAAAAATGTTTACTGCTAAAAGAGCA TAAGACCTCCCCAAGATGCCTATCCTTAAAAAGAAATAAGAAGACCTGAG AGAAATAATGATTGCTTATTTTCCAAATGAGCTAAAAAAAATCAATTATT TCCTTTTTTCAGTGCCCTGATGAATTAAAGATCAACCTACAGCCAAGAAA GGTATGAACTTAATATTTTTCTTCTTTTACTCTTCAATAGATTTGAAATG GTGATCACAAATGATTTATTAGGATAGGATATAGATTTTAGGCTTAAAGC TTTGATATTTCTCAATTTCTTTTTCAGAGAGACGATTTTCTTTCATCAAG CATCAAGGTAAGTTTTTTACAAAAGTGCGATATGTCATTCAACACCTCAA GATGCCTAGTATAAAGTACTGACTAATTTATTGCTCTTTAATTTATTTTT AGCATGTACTTGGTGACCATAGAATATTCATAAAACATTTGAAGTCCACG ACAGCATATAATCCGTTGCTCGGTTTGGATGATACTGACCCTTCTGCAAC TCCTGATATCAAAATTGGAGATCTCCTCACCAAGAATGGTATTTCTGACT TGCTGAAACAACCTGTCGAAGGGAAAAATGGTGGGTCATCAGCAAAGCAA ACATCTCAACGTGGTGGCCGTAAAAATTCACGATCATCCTCAGATGGTGG TAAAAAGCAGAAAGAAAAGCCCTCGCCTGTCAAGAAAACACCAATCAAAG AGAAACAGTTGAAAAGTCCAGCAAAACCTAAACCACCTCATATACAAATA CCAAAAGCTATGAATAATAAAAAGGTTTGTAGTTCTTTTGCTATCAGCCA ACCAAACTGAACTTCCTGAAATAACTTGTACAAATCACTCCCCAAAAATA TGTGCTACTCTCAGATTGCAGTGCTATTATATGTCATAATTTTTTAATTT GATTATTTCATTCTAGAGCTCAAAATCAAAAGCAAAGATTGAAAGTATCT TAAAAGAGATGACTCGGCTTGATCCACCATTGACTGAAATCAAAACACCA CACAAAGATCAAGATGAATTCAAATATCCTGCCTTGCCTCCCACATCTAA GGTTCGTACATTTTTGAGATTGCTTATTTTTTTTAGAGTTTAGTTTCAAC CTTTGAAAAATAAATGATGAGGAGATAATGTCTTAATCACTTTTAACAGA ATCTGCTAACAAAAATCCCTTAACAATTCCTCAATTCTTTTTTGTGTTTA TGCAGGTAAAAACATGACCTTTGCATTTTATTTTAGGGAAAGAAAAAAGA GGCAGCAAAGAAAAAAGAGGCAGTGAAAAATAAGACAGAGAAAACCAAGA CAGAAACTATTAAAAAGGAAGAGAATAAAAATGCTTCTAAAAAGTAAGTT TTGTCTTTTTTTTAATCCCTTGTATTGTTTCATCCCACGGCATGCAATCA CTTCAAATCTTTTTCACAGTTTTTTATGTTTGTTTGTATGTAAGTAAGTC TTTTATTATCCTTTTTTTTTTAGTCCCATGAAATTGCAAGGTACGAGGCT CAGTGAAGATGAACCGAAACCAGTTAAAGAAAAGGTATTAATTCCCACCT TTATTTCAACTTTTTGTGATAATTCTCTTTCTTTGTTGGGTGAGGCATGA AGGTAATAAAGATAGATGGAGAGTCAATGCCTTTTGTTCTATTCTGATTT ATCATCGGAAGCAAACAGCTGTTTGGTTGCTTTGGGAATAAGATGATTAT ATTTGGGTAAACTCGTGGGAATATTTAAGATGAATGAAAAGACATTCCAT TTTTAACAAGTATATTGAAATATAATAGCCTTGTCATGAAAAATTGAAAA AAACTTCACATAATAAGCACAATACTCTAAACTTCTAGGGGAAGCTGCCC ATAAGGCCATCGATAGATTTAATAAAGAATTACGTGTTACGATTAGGAAC CTTGTATCGATCATTTTGTCAGAGTATGAAAACCGCTGCTCACTTAGACG TGAAGATTTTAAGATAAGAAACTTTCAATGATATAGTGATGCGACTCTCA ATGTTTACAAAATGCCAGTCCAAAAATATATCCTTATGAAATTAATATAT TCTTTAATCCGTAAATCAGTTGAAACTATTTCGAATCGCATTTTAACTAA GATTTCTCGCAAAATCAACGGACCAGCCTCTTTCTGTTCTTATAAATTTA CATTTCGGATTTTTTTGCTTCCAATGATGGTACATCAAAGAAAAGCTGCT TTGAATAGATTTCCCGGATAGATTTATAAAAGATTTCAACGACCATTTTG TTCATTACCGAGACGTTTTCTCTCCATCTATATCTTTGTTACCTTCATGG GTGAGGGATTCATGGTATTGGTTTTACATTAATGCTACAAAGAGGAAGTA ATAGTTTTTTAAAATGTTCTCTTTCTATTGTGATAACTTTCACTTTCACT TTTTAGAAAAAACCTGATCGCCGAAAATCTGTATCAACAGTTGTCAATCA GATGAAGTAAGTGGATACAAGACAGATTTTGTTTATGTGAAATAATTCTA ACTTGCAAATTTCCTTCTGGGATTTTTCAACTTATTTCTAATTCTAGGAG AAATTGTGTTTTATCATTTGAAGTTATACAATTTTAATAATCAAGGTATA AAAGAATAATTTCTGAATATTTTATTTTACCACTAGGACAAAGAAAGTTT CAATGTCATCAGATTCTTCATCAAGCGATGATGATGATAGCAGTTCAGGA AGCTCTGGATCAGGAAGTTCTTCAGACTCTGATGATAATGAACCGTCAGC TCCAGATAAGAAGGTAGTGACTTAGTTCAGTGCCCAAATGAATTGATTTA GATTCTTTTCCTTCTTTTGCTTTTCTCGGCTGTTTAACTTTCTTTGTAAT GATGTTTGTTATGGTCAATCCTTAAATATATATTTTTTAAATTTTTAGCC AAATACAAACAAAGAAGCTGACCCACCAGACAAGATAAAAAAGGAATTGC CAAGCAACAATAATAATTATCTAACAGAAATTCCAATTGGCGTTAATGAT AATACCACAAACATGATGGGTTTGAAGTTCCCCGAAAAATCCAAAGAAAT GAATCTGACATCGGTAGCGGTGAAAGAAGAAAACACAGGACTGATGAAGG GAGCTAGTAATGGTTTAGACTTGATGGACATTAATTCGCATCCATTTACC TTGGGCTTTTCACTTGGATCATCCCCTGAAAAACCTATTAGTCCTTTAGA CAACATGAACAGTGACATGAAGTTGTTTGAGGACATTGATAATTTTCCAA TTGCAAATTCACATGATAATTTCACGGTTGACGATTTGATTGGTAAAGAG TTGTCTGATCTTGAAAAAGATACGACTACTAATACTTCAATGAGCGAGTC CGAAGACCGAAGTGCATTTGATTCTTTCCAACAGAGTGACATTAATGATT CTCTTGTGTTGCACAAAAAGAACAATTTGTACAGTAAAGACAGCAAAAAA GCTGAAAGTCAACAAAATGACTTGAATAATAAAAACTCTACTTTATCACA AGATAAAAAGACTGACCAACGCAATAAACTATCTTCAAAAAGTAACGAAA CTAAGGACAAATCAAAGAGTAAAAATACAAGGATAGAGGGTATGAACACG GCTTCAGCATCTGTAAAAGTGAACTCTGGTTCTAATGGTGGCCAACCATT CAAAACGAAAGCTCAGTTAAAGATGCCCGTAGCTGATAATACTAATAAAG AGACTGAAAAACCTAAAAGTGTTGGAAAAACTAGGCGGCAATCGTCAAGG TCTTCTGTTCGAAATAAAGATAAAAAAGAAAAACAATCTACTACAAGCTG TAAAGGTAGAGAAAGCTTAACGAAAGAGCCTGAAAAGGCTAAAGTTATTG AACAATCTGAGGATGATGTTTTTGGTAGTATTTCTGAATCGTCTGAAGCA ATGGATACTACAGATAGTACTCCGAAAAAGTTATCTTTATCCAAACCGCC TGCTCAAAAGGACGAAAAACCTGTAATCCCTAAACCTGAACCAATTAAAA TGAGTAGATCAAGTTTGATAGCCAATGATATGAAAGAGATCTTTTCTGGA CTTCCATTAGAGCCACCAAAATCGATCTTTGACGATGATAGCGATTTCTT CGAACAAAGGTTAAATACAACCATACAAGGTATCATAAGCCCTATTGATT CTTCACCCAATATCTCCAACTTTGGTTTAACACCTACCCCAACCACACAG AATGACGTCACAACAGTTTCTGCTCTTGTGACAACTTCTTCACCCTTTGC AGCATCAGCTTTAACTACTACGAACACGACATCTGGCTTGCTTTCTTTTA CTCAAGATATACCTCCTCCTCTCACCACTATCACCACTTCAAGTTCCAAT GAAACTATATTACCTAAACCTATTGCATCACAATCTGGCTCGTGTAAACC GGTAGAAAGTTTGAAGGAAGAAATCAAAACCTCTCCAACTACAGCTCCAA CTCTCGCCACCAATTTTTCAGCCCCAGCTCTCCTCACCAATCTTCCAGCC AGTCTCGATTTGCATGAAGAAAAGCCAGAGCCAAAACTAGAAGATACTAA TATACCTTTGCAGTCGCAAGCCCGACCTCTTCCTCCAATTGCACCTGTAC CTCAAACTAAACCAGATAATCTGCTATCACCTCCTACAACTACGACAATC TCGTTGCAAGAGCCACCACTGATCACTACAACCTTCAGTCATCCTCGTGA TGTGACTTCAGCAGTACCGTCAACCGTTAACGCTATCCTAACGAGGACAA CCAGCATTGACGCACCACCGTTTGATCATATTTCAACAATGATACCGAAT GGACCTCCTCCACCCTACTCAATGAACAGTAATATGAATCAGCTTCAACA CTTTTCAAACCAACAATCTTCTCAGAAGCAACAACCGCCTGTTAATATGT TACAGGATCAGCAATTTAAACAACAGCAACCACATTTGAATATGAACTTG AATANTCATCAGCTTTAACTACTACGAACACGACATCTGGCTTGCTTTCT TTTACTCAAGATATACCTCCTCCTCTCACCACTATCACAACTTCAAGTTC CAATGAAACTATATTACCTAAACCTATTGCATCACAATCTGCCTCGTGTA AACCGGTAGAAAGTTTGAAGGAAGAAATCAAAACCTCTCCAACTACAGCT CCAACTCTCGCCACCAATTTTCCAGCCCCAGCTCTCCTCACCAATCTTCC AGCCAGTCTCGATTTGCATGAAGAAAAGCCAGAGCCAAAACTAAAAAACA CTAAAATACCTTTGCAGTCGCAAGTCCAACCTCTTCCTCCAATTGCACCT GTACCTCAAACTAAACCAGATAATCTGCTATCTCCTCCTACAACTACGAC AATCTCATTGCAAGAGCCACCACTGATCACTACAACCTTCAGTCATCCTC GTGATGTGAATTCAGCAGTACCATCAACCGTTAACGCTATCCTAACAAGG ACAACCAGCATTGACGCACCACCGTTCGATCATATTTCAACAATGATACC GAATGGACCTCCTCCACCCTACTCAATGAACAGTAATATGAATCAGCTTC AACACTATTCAAATCAACAACCTTCTCAGAAGCAACAACAACCTGTTAAT ATGTTACAGGATCAGCAATATAAACAACAGCAACCACATTTGAATATGAA CTTGAATACTCGGAATGATATGAATGCACTTAATTTCCACCAACAAATTC CTCCACCATACACACATCACCCAGGCATGGGATTCCCACCAACTACCAAT AACTCCTTTCCACCAACAACCAACCCTGCGTTCCCTCACATGTCTCAAAT TCCTCCTCCGATGGTGAATTTGAACCATCATAATAGACTGCAGCAACCAA TACATTTTAATCACGAACAGTCTTTAGATTTTTCATCAAAACAACCTCAA CAACAACAACAGACATTGTTACCAGAATCCAATAAACCCTCAAATAATTC TTTAAAACCTCAGGCCACTGTACCTCCTCTGAATTTCAATCGTGGGCAAC CTCCAGTTAATCCATCAGACAATATGGAATTGAACTTTACTCCGTCAGCT CCAATGACAAGCACCAATAATATGCAACAACAACAACAACAGCAGCACCA TAACANTACATTCCCTTCCAGGTATACCTCATCCACAATCAGTTCATGGT ATGCCACCTACCCACACTATGAGTAATGCGCATCCTCCTCAAGCGGTTCC TGGTATTCATCCTCCTCCAACAACTACCACTGTTTTGCCTCCTCCTCATA TTGCAACTAAACCACCAATGCAGACATTACATAACAGCTCTACTTCTAAT TTTCAACCGATTCCAAACAACAGTGTATTTGCAGCTGTACCACCTACCAC AACTCCAGGTATACCACCTCTGATAAGTGACCAGCAACAACAACCGCTAC CAAATAAACCTGCAGTAGTCTCTCATCCACCAACAAATAACACACAACCT TCACTACCACCGACAAGTAGTTTGGCAGGTGCAACATCCTTTCAGCCAAT ATCTTCTGCCCAACAACCACCATCTGCTCAACAACATCAACCTCTACAGG AAGTGAAACCAGAGCCAATTGAAGCCAGTTTGGATCTCCTTGGGTCCAGT CAACCGGTTCTTGGTCAGTATTATCTCTAATACTCTTCTCTTTCTAGAAA TTCTTTTTAACATGAAGTGAAATCTTAATCGTTACCTTTACCTCTCACTT GACTTTAAAACCAGTAAAAGATTAAATTATTCTTTGTCCATGATTACCTT TTTGCTTTGGAGTCAATAGATTGAAAATGATAGATTTTTTCTCCACAGAT TCTCAAGTCCAACCACCATCAGTCTCCACGACAGACGATGTTATAGTAAC ACGTGTCAAAGAACCATCCAAGCAAAGTCGCAGAAACAGTGTTGTGAAGC AAGAACCTATAGAGCAACCTTCTCCTATTCCACAGTCTGTTTTGGAAACA GAAAAGAGAGATACGCCAAGTCCTGGTAATTGTTTCGATGTGTTCAACCA AATAAATGATATGACAACACAAAACAACGCAAAAGAAATTGTCGTCAAGG AAATTGCCGTCAAAGAAATTGCCGTCAAAGAGCAACCAAAACGTTTGTTA GTGAAGATTCCTTTGAATCTTGTAAAGCTGAAACGTCAATCAAATAAGGA ATCGCCCGCCGTTGGTGAAGATATGGAGATTGATATCCTTGGAGATGATT CCCCGTTGAAGAGGAAGAATCCCCGTGCTGTGAATGGTGGTACAGATCGA AAGGTGGCACGTATCGAATCTAGTGATCAAGAAGATGAAGCTCAATCAAA ACCAACAAAGAGTTTGGTCGTCCGCATCAATCTGAACAGACTGAAACGTG TACCTAAGGTAAGCATTCTCCATGATCGAGGCTAGAAGAGTTTTCTTCAA AACCTTTTAAACAGTCCTTTGATTAGTTTTTGGTTGTAATGGTCCTGACT CAATGACGATGCAAAAGTGTTAATAAATTGATCTGCATCTTTCTATAAGA TTTTTAATTATCACCTTTAGATCGTCGCTGAGATTGAGTCAGGGCTCAGT TTTCTTTAGTTTTAAGGGTTTAAAATGACAAAAAAGAGTTTATTCAATTA AATTGGTTTTGCTTGNAACCACCATCAGTCTCCACGACAGACGATGTTAT AGTAACACGTGTCAAAGAACCATCCAAGCAAAGTCGCAGAAACAGTGTTG TGAAGCAAGAACCTATAGAGCAACCTTCTCCTATTCCACAGTCTGTTTTG GAAACAGAAAAGAGAGATACGCCAAGTCCTGGTAATTGTTTCGATGTGTT CAACCAAATAAATGATATGACAACACAAAACAACGCAAAAGAAATTGTCG TCAAGGAAATTGCCGTCAAAGAAATTGCCGTCAAAGAGCAACCAAAACGT TTGTTAGTGAAGATTCCTTTGAATCTTGTAAAGCTGAAACGTCAATCAAA TAAGGAATCGCCCGCCGTTGGTGAAGATATGGAGATTGATATCCTTGGAG ATGATTCCCCGTTGAAGAGGAAGAATCCCCGTGCTGTGAATGGTGGTACA GATCGAAAGGTGGCACGTATCGAATCTAGTGATCAAGAAGATGAAGCTCA ATCAAAACCAACAAAGAGTTTGGTCGTCCGCATCAATCTGAACAGACTGA AACGTGTACCTAAGGTAAGCATTCTCCATGATCGAGGCTAGAAGAGTTTT CTTCAAAACCTTTTAAACAGTCCTTTGATTAGTTTTTGGTTGTAATGGTC CTGACTCAATGACGATGCAAAAGTGTTAATAAATTGATCTGCATCTTTCT ATAAGATTTTTAATTATCACCTTTAGATCGTCGCTGAGATTGAGTCAGGG CTCAGTTTTCTTTAGTTTTAAGGGTTTAAAATGACAAAAAAGAGTTTATT CAATTAAATTGGTTTTGCTTGTTTTCTAGGGTAATGGAAAAGGCAACACG GATGAGTAAGTATAATTTCCCTGTTACCTCTTACTTCTGTTTACAAGTTG ATGAATCGAAGAACGAAAATTTGATGAATTAGATTCGATACCCACAAATC TAGCCTTTTATTCTCAACTTCAGTTGAGCTATAATCTGAGAATGTCTGTA TGTATGTATGTATGTCTGTATGTCCGTCCGAAAACTTTAGGGCAGGCTGN TAAATGTTACTCGAATTTCAAGCTATGAAATTCATTTTTGCAATTTTTAC AGGCTGGAAACTGACGTCTCTGCCAAAAAGAAACGAGAACGCTATCAAAC TACAAAAGAAAAGACTGTTCCAACTGTTCGAACTGCTGTCGTTGATCAAA GTATGTGTACTGTCTGTGCTACGCAGAAGTACAACAGCCGAGATCCGAAA CGACTAGCCACGTAAGTATATAACCACAAGCCACACACGGTGATCTGTGC TTTTTGAAATTCGTCATTCTTCCGCCAAGAGATTTTTAGAATAAAGACGA AATAACGGATTTTTTCCAGTTGGAATAATACTTCAGTTCTCTAATAGTAA TGGGGATAAAACTTGGTTGGACTTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034943XLOC_034943Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055559-exon-scaffold_253-1575043694:1094871..1094963TCONS_00055559-exon-scaffold_253-1575043694:1094871..1094963Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1094625..1094712TCONS_00055559-exon-scaffold_253-1575043694:1094625..1094712Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1094363..1094401TCONS_00055559-exon-scaffold_253-1575043694:1094363..1094401Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1094207..1094236TCONS_00055559-exon-scaffold_253-1575043694:1094207..1094236Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1093740..1094111TCONS_00055559-exon-scaffold_253-1575043694:1093740..1094111Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1093463..1093597TCONS_00055559-exon-scaffold_253-1575043694:1093463..1093597Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1093171..1093277TCONS_00055559-exon-scaffold_253-1575043694:1093171..1093277Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1092980..1093040TCONS_00055559-exon-scaffold_253-1575043694:1092980..1093040Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1092058..1092107TCONS_00055559-exon-scaffold_253-1575043694:1092058..1092107Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1091751..1091877TCONS_00055559-exon-scaffold_253-1575043694:1091751..1091877Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1087901..1091615TCONS_00055559-exon-scaffold_253-1575043694:1087901..1091615Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1087156..1087715TCONS_00055559-exon-scaffold_253-1575043694:1087156..1087715Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1086059..1086084TCONS_00055559-exon-scaffold_253-1575043694:1086059..1086084Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1575043694:1085487..1085811TCONS_00055559-exon-scaffold_253-1575043694:1085487..1085811Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1094871..1094963TCONS_00055559-exon-scaffold_253-1510915933:1094871..1094963Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1094625..1094712TCONS_00055559-exon-scaffold_253-1510915933:1094625..1094712Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1094363..1094401TCONS_00055559-exon-scaffold_253-1510915933:1094363..1094401Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1094207..1094236TCONS_00055559-exon-scaffold_253-1510915933:1094207..1094236Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1093740..1094111TCONS_00055559-exon-scaffold_253-1510915933:1093740..1094111Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1093463..1093597TCONS_00055559-exon-scaffold_253-1510915933:1093463..1093597Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1093171..1093277TCONS_00055559-exon-scaffold_253-1510915933:1093171..1093277Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1092980..1093040TCONS_00055559-exon-scaffold_253-1510915933:1092980..1093040Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1092058..1092107TCONS_00055559-exon-scaffold_253-1510915933:1092058..1092107Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1091751..1091877TCONS_00055559-exon-scaffold_253-1510915933:1091751..1091877Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1087901..1091615TCONS_00055559-exon-scaffold_253-1510915933:1087901..1091615Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1087156..1087715TCONS_00055559-exon-scaffold_253-1510915933:1087156..1087715Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1086059..1086084TCONS_00055559-exon-scaffold_253-1510915933:1086059..1086084Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1510915933:1085487..1085811TCONS_00055559-exon-scaffold_253-1510915933:1085487..1085811Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1094871..1094963TCONS_00055559-exon-scaffold_253-1491911889:1094871..1094963Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1094625..1094712TCONS_00055559-exon-scaffold_253-1491911889:1094625..1094712Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1094363..1094401TCONS_00055559-exon-scaffold_253-1491911889:1094363..1094401Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1094207..1094236TCONS_00055559-exon-scaffold_253-1491911889:1094207..1094236Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1093740..1094111TCONS_00055559-exon-scaffold_253-1491911889:1093740..1094111Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1093463..1093597TCONS_00055559-exon-scaffold_253-1491911889:1093463..1093597Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1093171..1093277TCONS_00055559-exon-scaffold_253-1491911889:1093171..1093277Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1092980..1093040TCONS_00055559-exon-scaffold_253-1491911889:1092980..1093040Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1092058..1092107TCONS_00055559-exon-scaffold_253-1491911889:1092058..1092107Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1091751..1091877TCONS_00055559-exon-scaffold_253-1491911889:1091751..1091877Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1087901..1091615TCONS_00055559-exon-scaffold_253-1491911889:1087901..1091615Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1087156..1087715TCONS_00055559-exon-scaffold_253-1491911889:1087156..1087715Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1086059..1086084TCONS_00055559-exon-scaffold_253-1491911889:1086059..1086084Clytia hemisphaericaexon
TCONS_00055559-exon-scaffold_253-1491911889:1085487..1085811TCONS_00055559-exon-scaffold_253-1491911889:1085487..1085811Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1085487..1094963 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.20634 1.18962 0.794793 0.591236 1.22408 4.78678 0.661506 0.00508768 2.87178 0.762459 5.14288 3.81033 3.23077 0.392065 0.427734 2.11995 8.81152 6.91818 5.19167 6.72897 4.22347 5.1889 2.85228 3.64741 1.93292 6.09189 4.62818 6.18637 5.34874 5.18836
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055559 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top