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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055360 ID=TCONS_00055360|Name=TCONS_00055360|organism=Clytia hemisphaerica|type=transcript|length=1861bp
CTAAATGATTGATTTATCTTGATTTGAAGCATTTTTCTATCGTTCGATGG
AAGAACAACAGTATATGGAACAAATGTCTTTTCACCTCATACCTATCGAA
TGCTATTGTTCCGTCTGATAATATTTTCTACTATTTCTTAATGTACAGGA
CTGGCATCGAAAGTGAAGCGTTCAGATAGTTTAGCCTTGAAACTTGGTGC
CCGACCGTCAAGATCTGAACTTGAGGGCAAAAATATCATCCCAACACAAT
CGGACGATGAAAAACTAGCATTACGTTCGAAAGTCGGGACCAATCTCGTC
AGACGGCTAAGCCAGCGTCCATCAAAAGAAGAGTTGGAACAAAGAAACAT
TTACCGCACCACCACAGACGAGGAGACACACCAAAAGAACTTGGAAGAAA
CCAAACGACAACTCTCTAGAAAGttatcTCGTCGACCTACCATCAAAGAG
TtacgaaagaagaaaattatcgGTTTTAACGAATATGTCGAGGTTTTCGA
AGTCCAAGAATACGATCGAAGAGCTGACAAACCATGGACACGTCTGACAC
CCAAAGATAAAGCTTCCATCCGTAAAGAATTGAACGAATACAAAGAGTAT
GAAATGGATGTTCACGAAGAAAGCAAAATTTATACTAGGTTTCATCGGCC
ATAACACAACATTTGAACTTCCAAACTGGTACACGTGTCATTTAAAATGA
TGGTTGCTCGTGTGTTTGGTATCATCGGTGAATAGAGGAATTGTTAACGA
CCGTTCCACTATTTACCCCCAAACCCAAATCATAACATACTTATCAATCC
ACCTGTCAACAACCGTTGTTATTTAGTAACGTGATATAAATATTATattt
aaatgaaacttttttGCACAAATGTAAAACGAAAGCCAGATGGATTATTC
TCAAATGCATAGTTGTAATGCATGATGGTCCGGAAAGGGGGTTGCTGTCA
ACCCAAAATGCTGTTTGTCCTACCATCGAATGATGCGAATGTGCAGTTAT
GATAATATTAGCGCCTGATGTTTTAGCAGATATTGGaataaaagattatt
tttgtattgaatttcaagaactttaaaaagtaaaagttaaaataCGAGTT
ACTTTGCTCTGTTAGTAAGTTCAAATGGATGCTGTTGTCTATTGACTGTC
AGACGGTACCTTAATTATAACTCTGAAATGACTGACCCTTATGCTTTTAC
TTTATAAATGGGTTATATTGTTCGCCtttattattttcttaaatTATTTT
ACATCAAGCTTCATCCTACCTGAAAGATATCTTtaacatttaaaatttaa
aacttcCTATACATAATGTAATTCCACTATGAATATGTTTTGGCCTTTCC
TTGAGATAAGAGTTTTCTGTGCCACTATCGTTCAGTGTTAGTATTTGACC
TGTTTTGGTGCTAGCTCGTCGATTTATGGTTTACGGATTTTAAAAGTTGG
CCAATTTTATTGTGCAATCATTTGTTTAAACCGTTGTAACATagtttgaa
ctttttttaaaaaaataaatactttgttcttttttgcATGTAAAATTACT
TTTTGACCAGTATTTTATTATACTATAAAGACTGGAAGAGATTTTTTGTA
CCTTTTACTCAACGAAATCACTATACCATTACGAGTGTCTTTTCATCGAT
TACGGCATGGACAACATTTGACTCCCTTTCTTGCGAAGTAATCTACGACA
ATTTATTACTAAAGGAATCCATATCGAATGTNCATTTGACTCCCTTTCTT
GCAAAGTAATCTACGACAATTTATTACTAAAGGAATCCATATCGAATGTT
TTGTTCCTCAAGTCATCTTTGAAAAGGGGCATTCCATTTTTGTTCCGTAA
TCAATGAAAAG Run BLAST on NCBI transcript from alignment at scaffold_253:654172..666387+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055360 ID=TCONS_00055360|Name=TCONS_00055360|organism=Clytia hemisphaerica|type=transcript|length=12216bp|location=Sequence derived from alignment at scaffold_253:654172..666387+ (Clytia hemisphaerica)
CTAAATGATTGATTTATCTTGATTTGAAGCATTTTTCTATCGTTCGATGG
AAGAACAACAGTATATGGAACAAATGTCTTTTCACCTCATACCTATCGAA
TGCTATTGTTCCGTCTGATAATATTTTCTACTATTTCTTAATGTACAGGA
CTGGCATCGAAAGTGAAGCGTTCAGATAGTTTAGCCTTGAAACTTGGTGC
CCGACCGTCAAGATCTGAACTTGAGGGCAAAAATATCATCCCAAGTAAGT
TCTCATTGTCACTTTAAGATCATCATCCCTTCAAATTACCACCAGTCCGG
GGTGTGCTTTCTCCGTACGACAAAATATTCTGAGTGATTTCTTAATATCA
AGATATACTACAGATTTTATGCCtcatgcacgttttttataaggaaagtA
GTAGAAGAAGGAAAATGATCCAAAAATAAGGAATCGTTGAGGAACTGCTC
AGgttgagaataagaaaacaagttaaaaGGGACAGTAAGAGTAAACCTTG
AACTTGCACACATTTACAAAAGCCTACTCAAAAACAACATTCGATAAACG
TCTTTTTCTGTCGAAAACAGAAAACCTACAGAAACAATACTTATACAGAT
GTTACATACTTAGCAAATCCAAACTTAGCAACttagtaaataaggaactc
aatAAGGGACTtaataaggaactttgaggctggaattctctggaaaaata
aggaactccaggttCGGGGCCAAGTTAAAGTtccttataaagaaaacgtg
tatcaatttaaaaaatttcctttgtagAAAGActgaattcttctttttat
ttgttcACTAGCACAATCGGACGATGAAAAACTAGCATTACGTTCGAAAG
TCGGGACCAATCTCGTCAGGTAAGAAACCTTCCTTGGTTGTAATGTAGTG
AATCACCTTTTCGTGAAATAGTTAAATAAAGTTCTTGTAAGTGTTTGAAC
AAATTAAATAATGCTGGCTAAATTTTACACTTATGGTGGTTATGTTGAAC
ATTTTAAATATTACATTTCTTTCAAGCGAGAACTTGAAAAGCATGCTAAG
AATACCTCTAGATGGTGtcttttcatttgttttattttccacTTTCAGAC
GGCTAAGCCAGCGTCCATCAAAAGAAGAGTTGGAACAAAGAAACATTTAC
CGCAGTAAGTCCCCCTTCTTTCTTTTCCGCTTTTCGATGATGCTGTATTC
CAGCAGTTGATGCTCTCGACCAGAAATGACGTCTTTTACCAATTAGTTTA
GGTCTATACAGTTGGAAGTAAAGATTACCAAATAAGTCTATTAGTAAAAA
AGTTgtgttttggatttttttatattaagtGTACTTAGGACAAAGAACAA
ATGAACGTAAAGTCTGTCCATCTCTTCTGGCGACTGGACGACAGACGAAG
ATTAGACGATAATATTATAAATTTCAATATTATTTCGTAGATGTCAATaa
atagacctgtgaaatataaagGGATATgatataccgtattacttcgaata
aacaccccggccttttattaattttttcggACTTAAGGAGAGGCGTTTAT
TTGAGAGGGCGTTTATTTAATAATTTATAAACGAGGTCATATTAGTAATG
TGAATGAGCCTTATTTTGTCTTTTCATTATTATTCGAGTACAAATATGTC
AGTTTAAGGATGTAGAAATGGGTCAAAACCAGGTCGAATACAAGAAGAAT
ACGTTATTGCTGTATATCTAAGTTTATCTTCATATTATACTTCCTTATTG
CTACTTGTTTTAAATAAACACCCCTCGGAGCTcgtttattcgaagggggc
ttttatttgagggggcgtttattcgaagtaatacggtaagtCTTatcgaa
ttttggccctttaaTCTTGATTACCTAATTAGACAGGTAAACTGAAATAA
GCAGTGGGTCGGAATAAGATTTTCGAgggtgaaaatttttgaaaaggaga
cAATTGTAGCATTAGGGTAGGGAGAAAAGAGACTTTGAAACCATCTTGTA
GAGGAAAAGAGCAAATACGGAATAAAAGTGAAAAGGCCTCCTCTTGGAGA
GAAAATACCAACGGTATTAACCAAATCAAATGGACTTTGAATCGGAGCAG
TCAACATGTGTTTCAACATGATCCATTTGGGAGAAACAAGCGCTTGGAAG
TTTGTTTGCTGCTTTAGCTGTATTTTGTTTCCTTCTCTTTGGGTGGATCT
TAAAAGGTGAACTTCACAAATTACTTTTCCCTTTGTGTAAAGTCACTTCG
GCTATTTTTGTGTCATTGTTTCGAAATATGGAGtaatcaatttttaaata
ttttggcgAAATTTATAGGCGGACTTGAGGTcaaatattctaaaattttg
TAAACCTAATTGCGTAATTTCGAAATTGAAATTCCCAAGTGTCCGCCTCG
AAGCATTATAAATATAACACAAGTCTGGTTGGTAAGGAAATCGAAGCATA
ACTAAGGGAAGAAAGTGAATCCATTCAACTTGTGGCTCGACTTCATTTTC
GTATCCAATAACTCCCAATAATAACACTTTATAGAATTTCACATAATAAT
AAAGATTTCTTAACTTTCTTAGATTTCGAATAATAccaaaaatcgataaa
aatagGAACTGCCTTACTTTGAGCAAGTGGAGCAGTGGATTGAACAGAAG
TGGTGGTCTTTTCACTACAATAACTATAATGACACACATGGAATATCAAT
ATTAAATATCTCAAATCTGGCAGTAGATTTTTGATTTCTCGTGTCATTTC
AAGGAGAGCGCTATTTAAAATTTCTAACACTTCCTTCTACACTAGCTATT
CTTGTCCTCTTGTAAATTTTGAGAGATTAGCATGGACCAGACTAAATCTT
TTCTTTACTTTGTCTATTTCGACATTTTCTTGTCATGTCTTGTCAAGAGC
ACTTTATCTTCATATTTTATCATATTGTTGTACGAAATTATATCTAAAAC
GCAAGGGTACTCTATTTGAATATGACTTTTTGAGAACTTACCACCATTGT
GGGTTGGTAGTTTAAATTTGCATTTCGATAAGATAAGATAATGCATCTTC
TGTAACATTCTTTCTACACTCCAACGTGCCTTTCACTCTGTTTGTATAAT
ATGTTCGGTTTTAACTGTCGACACTCTATGTTGACACTAAGCAGTATTTG
TGATTAGAGTGAAATTATATTCTTGAACGTGTCAGGTCTTATGAAACGCT
CAATAAATGTCATTATGATGAAATAACCATTTCCTTCTCGGGGTTTAAAG
TCTACTAAAAAAAACGTGAAATGCTTGAGATCCGAGCTCAGGGTCTGTTT
TTGTCTGTGTATATCTTTTTTGATGCTAAGTACCTAAGCATGACTGTGAG
CTATGCTTTTAGTATCAGCTAATTTCTATCTGTCAAAAGAGCAATGAAGA
AAGATTCATGAataagtgattttttttgtgacatTAAAAGGGTATTGACC
AAAGACGAATGAAGAATACTTCATGCTCGCTGAATGGTAAACATTGCTCA
TTCCCTCAAATATAAAGTATTAAAATATCCTGAATGGACTGATTGATGGA
GAAAAACCTTCTGAATATTTGATGAAGCTGAAAAGCTGGTCAATTGGTCA
TGGACATTTTTATGGAAGATGATATTGTATGGTGATGTGTCATGTATTTC
ATTCTATCCATTCACGTTCTCCTTCCTTCTCCCATCCCTACTTCATTATG
CAttcagattttctttttttgggaAGTGAAAAAGAAATGTCTTTCGTCAT
AAGGATTGATACACAAATACAGAATGATTTCATTTCGTTAGTTGTTTCTT
GACTTGATTGTACGCAGGATGACGGAgtcttgtttttattatttcgatgt
tttatttttgagtcttcacattttgtttcttttggtTTATTGTTCAGAAA
TATGAGCAACTCCTCCGATCGAATCTATCATTCTGAAAACGAAGccggaa
attatttttgaacaaGGAACTTGTTATAAAGTGTCTCTGCTTTTTTGTCA
TACTCACAAGGCCCCAATGCCTCAACTCTTAACTCTTTTTCTTTTGCCGT
TTTACCAATTAAGGAGAAAGAAGTGTACAATGTATCGACCACTACCGGCT
ATCCTTTCTAGGAAATCACGAATAATGATGTTTTCCATATCCCGTTGTCT
AATAATTTATAACGGAAGTCGTCAAACAATAATTGAAANTGATGTTTTCC
ATATCCCGTTGTCTAATAATTTATAACGGAAGTCATCAAACAATAATTGA
AAAACGAGATGTAGATAAATGATGTCATCTTTCTAAAATTGGTTAACATT
ACGTATTGTTTTGTAATCGAATTTGTGAGATATTAAAGACGTGGTAACAT
CCTTTTCTAAACGttcacttttcattttcagcGCTCTCAGTGTCTCCTCA
AAACACAAATAAAAATACCACATAAAAAATACATAATTGACTTTGTGTGC
TTCCACCAAGTACACATAAAGAACATTGCACAAATTTCTCCTATGAAGAA
CTTTATGAAGACCACTCGTGACAAATTGGCGACAATGAGTTTATCTGCAT
ACAACACGAACCGACTGCGCATGTACAACACAATCTCACTGAAATTGTGG
TACTCGCTTTTCACACCTTTCGCAGGTAATCCCTCAATCCTCGCTCATCC
CTACTCAGACTAAGCATAAGAACCTCTTCCTTGATATTATCACCCTAGTT
AGTATTCAGATTAATATAGACTACGAATTGACACGAGTGTCAGACAGAAG
TTCCTGCTTGGAACAGTTTGTTAATCAGTCAGTTTAATATTGAGTAGCGG
TTACACATCCTATATAAAACACACGGATAAGCAGTATCTCTTTTTATAGA
TTACATAATGCGAACCCTGATCTTACGTTTATATTTTTCGTCGGATTCCA
GTAATCGAAATTGCTTTACTGACGCCGTTTAATATCGCCACGCATTTCCT
GCGGTTGAAAATCTAATTATTGACCTCCCTTTCAGTCGACATTAAATTGG
GAAAAATGCGTTGATAATATTTGCAAAGGTCTGCCTTACCATATGGGAAT
GTAATTGGGACAAATGTTAATTTACGATCAAGCAATTTACGATCCAGTAG
ATTTTTAATGAagcaatttattttttgaaatcaatcACAGCTAACCATTA
CGTCATCATGACATGGTTCCAGGTGGGCGAACGAACAATCTGAAACTGTT
GATACATACGTGCGTTTCTTTGACCCCTTTGAAAGTTCAGATACCCACTA
TAGAACGTGGCCTTTATATTCTTCCTTATAATAGCACTCTTACTCAAATG
CAACCAAAAACTACCTGAATTATATCTCTCGTCAAGAAATTTTCTCTAAT
ACTTACTACAGATTTAGAACTTTTTGACAGAAAGTTTTTATAGTTATGTA
GTGTTATTAGCTTTCAGTGGttttttttcaaagcttttatTCGTTTCTTG
TCATTGAACGCTTTGATGTCAACTATGTCTGTGAGTGTCTACAACGCACA
AAACACTGTTTCAACTCTACTCTTTGCTCACTATGAAATGTATCGCGTGT
TTTTGAATCGCGTTGTGTTGCCGGTATTGGAGTCGTTAGTGACGTTGAAA
TTCCTTCTCCTTATTCTAGCCACCACAGACGAGGAGACACACCAAAAGAA
CTTGGAAGAAACCAAACGACAACTCTCTAGAAAGGTGAGGCTTCTTTCTA
TCCTTGGTACAGAAAACTATCCAATTAGCAGATAAAATTCTTTTTATCAT
TCCCTACTGGTTTCTGTTAATTGGAGTAAAGTCTTTCAAAAACGGTCGGT
AAAATGGTGGTTACTTATGTGTAAATCAGTTCTATTTGCAGCCCCTATAG
CTTTAAAGTCATTAAGCAAGAATCCACGAGCTAAATTCTTTTGAAGACGG
GTTGTTTACGTTGAAATGGTACTAGTTGTCTCGTTGTCATGGTGCTTTCA
AAGTGGTCTCTGCTTGGTTTGGCATTTATTAAAAAGTGTAAGATATGTAG
AGGACCCTTTGGAAGAAACGTGAGATCTTATTGAGAGTGACTGTAGTAGT
AATAGTTGTTTATCTATCGATGAATACCTTCGCTCTCTCTCTCCGTCGCC
TCAAAGATTTAGTCCTTCTAATTTTTCCAATCACATGCATAACGGGTATG
ACAAACCTCTCTTCGTTTCAAACACTCACTGTGTGGCCCATGATTGATAT
AGGTGCCGATATAGGGTGATGTCTGTTGAAAATATCTTATCCTAACACGT
GCGGAAATTGAGAAGAGATGCAGCACTTTTGTGGCGACACGGCAGTTTAG
GGGTTGAGTTTGATACGATGCCAGACGGTACTTTCAAACCActtgttgat
atttttaacGAAACCTGTTGACGTTTATGTTCAAAATGACCACCCTTGCT
TACGAAATGATCTTCACATTTGACCTCCCCTTAGAGCCTTTCTAATCTAG
ATTAATTTCGCTTTCAAGCCACGTGCTTTGAAACCCTGGAATTTTGCTCC
AATGAAAAACTCGTCTAAATAGCTGTCTAATTAGAGTCGGTTAACTTTAT
TCTTGTATGTTCGTTCACTTATATACTCTTAAAATCATTGGCGCATTTGA
GGGTACAATAGCCAACCCAAATTGAATCATCTCAACAAAAAAGTGTTAAC
TCGTCGTGTTTTTTAGAATTTCCTCTGTAACCTGGGTCTGTCTGACATTG
ACAAATGCATACCACGCACTGTGATTGTTTTCTTCCAGTATTTTTACACT
gtatttaaaaagtttatttcGAAATCCGTTTAAAAAGTAGTAATTCAGAG
AAAAAGAAGAGGAAAAAATGCATTGATGAGTGGTCCTATTAGACTTCTAT
TTTTGCTGGCGACAGCACTTTCGGTTTACGGTTTGTTAGAAGTTATAAGT
ATATCCGGAGTACCGTTTTCTTGTTATaagtaaaaagaaatttgatacTC
TTTCAAGGTTTGCTGAAGGCTTTTTTCTTGTTGAAAGTGTGAAGTGGGAC
GATTATTATGAAAGCNAAAGAAATTTGATACTCTTTCAAGGTTTGCTGAA
GGCTTTTTTCTTGTTGAAAGTGTGAAGTGGGATGATTATTATGAAAGCTT
TTCATAACACCTACAACTTTTTCGATACGATGTTTAAaataaagtaattt
cattttgaACTTTTCCTGGACAGGCGCTGTTTTTCAGAAGGCTTTTCCTT
TTTGAATCctacttattaaaaaaaatgaccCCCTTTCTTATTGAAAAAGA
AGTTCGTCCCATACGCAAAAAGTAAAACGGCTTTTCGTCAAAACACTAAT
AACCGCGAAAAGTGAGAAAAATGTAATTGGATCAGTTTACAGTATCACGC
TCATTTGATAAATACAGCAAATCGTAAAAgtaaatagaccttatcggagt
ttttgatttttctaaaaaagcgatgtattgtgggattgtttcgagtgtat
tacaatagaattccctcgaggaattcctaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgaggaat
tcctaagagatttctattgtaatacactcgaaacaatcccaaaatgcatc
gcttttttagaaaaatcaaaaactccgataaggtctattgataaaaaaat
tctttcatcGCGTGATTTTAAAGGAACACTTTTTCAGGAATCCAGTTTCA
TTAGCTCCGCAGGAGTAGGAAGATTTCTTTTCACGTTACTTTCAGATAGT
AAGAAAACACGTAGTGAATTGTCTGTCATTCTTTTGTTGTCTTTGTCAAT
GAAATCCTTAACGATCTTCGAAAAGTGACTTTAGTAAGCGAATTCTATTG
TCAAAAGAAACCTCGAATTACAATTAAAAATGTTGTGATGTCATCATGTA
TGTAAACGACATACATATAAAGCGAAAGTAGTGCTTATTGTCAATCAATT
GATTTGAATTACGACTGATATAAAAGgaaaacagaaagaaagagGAGAGA
AAATTTATCGTACCACTATTTAGTAGTGTGGAGATTGAATCATTCGGAAG
TCATAAGGAGGAAGGATAAGAACACGAATAGTAGTTGTAGAGCGATTCAC
ATTGCATCCAGTTGATCTTTACGATGGCTGTTCAAAAGATGAAGCAGTGT
TACAACCTTACCATCTCATCAATGTAGAAAACAATACCTTTCTCCATCTT
CTTTTCAACACACCGCTTTTCTTGATCACCCAACTTTACACCATCCTTCA
TCTACCTTCAACTGTGACACAAACACACTTTGTAATGTCCGACATTGCGA
CATGTCCTGTTTATCAAACTGCTCTACATTTCTCTCGAAATCTAGCAACA
GCAAGGACATACATATGGAACACTTTAGCAATTTTGAGTCGTGGACCGTT
CGGTTATCTCAGCGAGACACACGTTTTGGATTTCCTTATACTGACTTTCT
ATGTTATGACGGACATTCTATATGCTTTTTGCACGGACACTAATGCAAGG
AAGCTTGATGTAAATgtaaataatgatgaaaataataataatgtgaATAG
TGTACATATAACTGCTGCAAGTAGACACCACAAGAAATTAAGTACTGTAA
ATATTTATGTAAATAATCGCAAACAGGATTTAAGTTATTCAGAGTTTATC
GAACGAATCAAGATTGTATATAAACGTCAAAGGGTGAGTGTTTGCTGCTT
TGTTGCTGGTCCGACTTCTATTTTGGGTATTTGATTTTGGTATTGTGATA
CTTTTTAAGAGTTTAGGAGTATTTTGGTCCTGTTGGTTATTCTAAAGAGT
TCCCCTGTATTCTAATACCTGGTTCGCTATTCAAATCACTATTCGATCtt
tcatgaaaattgaattttcttttctttcattttcagttatcTCGTCGACC
TACCATCAAAGAGTtacgaaagaagaaaattatcgGTTTTAACGAATATG
TCGAGGTTTTCGAAGTCCAAGAATACGATCGAAGGTACTGATTCGTTTTT
TCCTATATTACATAAATCGCATTTTGGGAACATACTGTTAATCTCTTTTA
ATTTTAGCATCTATTCAACAATTTGGTATTTTGTTGTTTGAAGAATTTTA
ATGATCCTCACTAATGACCTGCAATTTAAAAGAATACCTATTTTGGTGCC
GTGTGCAAATAAATCTAACTTCATAAAGACTCCCTAGCTCTCTCTCTTTT
CATTGAGTGATAAGGTTttgatttaagggctctgaccatagtgaattttt
cataattgccgtgtttaaaatgtgttttcagaCTGatataaccaacaaaa
ctatggcatgttatacattttctgttagaaaaactattcctgaatctgaa
aattcaaaaattgcattgaaaaaatttgatNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNaaaggcaattctttgttaaaagtgttaaggaacctgaaatataac
ttttatgttcaaataccaaaatcaacttttggactatggtcagagccctt
aaagctttttgattaATCTTTTTTATCCCACTTTTCCTCTATTCCGTCTT
TCatttaacaaaatcttttaattcaTTAAAATCAATCTCTCGAACTTCTT
TGACTTCACGATCAGTCAGCTTTTTTTGATAGTGGAACGATTCCCTCAAC
TTTATTCCCAGGCTCTTTCCTCTTTCTGAGTAAAGCTTTTCTGAGTCAGG
TTGCTAAGCGATTGTAATTCTATCATTTGCGAAACAGACTGTCTGAAACC
ATGTTTTGAATGTTAGCACGATTTCCAATCGTTTGATAGGGCGATATATT
TTAATAGCATCTATGTgccaatatttaaaaaaataactatCAATGATAAA
ACTATGACATTTATGTCTACCCTCTATTTGCCCTTTCGCTATGTATGAGT
TTGCCCACTGTCTTGAATCGATTTCTTTCCCCATCTGGTTGAATCATTAT
ACTATAACCCTGAAAACGTTGCATTTCAACACTTTGACTATCTTTCTCTC
TTGTACAGAGCTGACAAACCATGGACACGTCTGACACCCAAAGATAAAGC
TTCCATCCGTAAAGAATTGAACGAATACAAAGAGTATGAAATGGATGTTC
ACGAAGAAAGCAAAATTTATACTAGGTAACAATCTTCCCTTGCTTTGTGT
CCACTTCCTTCAATGCTCAAGGGTTCAGTCAACCCTAATTAGAAGGgaat
tcttggtcccttgaaNCTTTGTGTCCACCTTCTTCAATGTTTAAGggtac
agtcaactctctctcttattcgaagtTTTCTGTGATTCGAACCAAAACAT
TGGTCCCCTCAAGTgaaaaattgtataaaaaaCTATCCtaattcaaatct
ctctaattcgaagggAATTCTTGGTAGAATTGGTAGGGAATTCTTGGATC
GAATTAGACAGGGTCAACTGTATTTGTAATGTTCCCCATTAATGAAAGCA
AATATTTTTAATGAGGCTACGAAAAAAATCTTTCGACAGCTTAAAGATTA
CTTTCACGAAGGGTTCCATACTGTATTATTTGTCAGTTCCATGGCTAGGG
ACAACAGTTTTTGATTGaacattttctcttttttttgcttCAGGTTTCAT
CGGCCATAACACAACATTTGAACTTCCAAACTGGTACACGTGTCATTTAA
AATGATGGTTGCTCGTGTGTTTGGTATCATCGGTGAATAGAGGAATTGTT
AACGACCGTTCCACTATTTACCCCCAAACCCAAATCATAACATACTTATC
AATCCACCTGTCAACAACCGTTGTTATTTAGTAACGTGATATAAATATTA
TatttaaatgaaacttttttGCACAAATGTAAAACGAAAGCCAGATGGAT
TATTCTCAAATGCATAGTTGTAATGCATGATGGTCCGGAAAGGGGGTTGC
TGTCAACCCAAAATGCTGTTTGTCCTACCATCGAATGATGCGAATGTGCA
GTTATGATAATATTAGCGCCTGATGTTTTAGCAGATATTGGaataaaaga
ttatttttgtattgaatttcaagaactttaaaaagtaaaagttaaaataC
GAGTTACTTTGCTCTGTTAGTAAGTTCAAATGGATGCTGTTGTCTATTGA
CTGTCAGACGGTACCTTAATTATAACTCTGAAATGACTGACCCTTATGCT
TTTACTTTATAAATGGGTTATATTGTTCGCCtttattattttcttaaatT
ATTTTACATCAAGCTTCATCCTACCTGAAAGATATCTTtaacatttaaaa
tttaaaacttcCTATACATAATGTAATTCCACTATGAATATGTTTTGGCC
TTTCCTTGAGATAAGAGTTTTCTGTGCCACTATCGTTCAGTGTTAGTATT
TGACCTGTTTTGGTGCTAGCTCGTCGATTTATGGTTTACGGATTTTAAAA
GTTGGCCAATTTTATTGTGCAATCATTTGTTTAAACCGTTGTAACATagt
ttgaactttttttaaaaaaataaatactttgttcttttttgcATGTAAAA
TTACTTTTTGACCAGTATTTTATTATACTATAAAGACTGGAAGAGATTTT
TTGTACCTTTTACTCAACGAAATCACTATACCATTACGAGTGTCTTTTCA
TCGATTACGGCATGGACAACATTTGACTCCCTTTCTTGCGAAGTAATCTA
CGACAATTTATTACTAAAGGAATCCATATCGAATGTNCATTTGACTCCCT
TTCTTGCAAAGTAATCTACGACAATTTATTACTAAAGGAATCCATATCGA
ATGTTTTGTTCCTCAAGTCATCTTTGAAAAGGGGCATTCCATTTTTGTTC
CGTAATCAATGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055360-exon-scaffold_253-1491911889:654172..654415 | TCONS_00055360-exon-scaffold_253-1491911889:654172..654415 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1510915933:654172..654415 | TCONS_00055360-exon-scaffold_253-1510915933:654172..654415 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1575043694:654172..654415 | TCONS_00055360-exon-scaffold_253-1575043694:654172..654415 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1491911889:654983..655040 | TCONS_00055360-exon-scaffold_253-1491911889:654983..655040 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1510915933:654983..655040 | TCONS_00055360-exon-scaffold_253-1510915933:654983..655040 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1575043694:654983..655040 | TCONS_00055360-exon-scaffold_253-1575043694:654983..655040 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1491911889:655270..655325 | TCONS_00055360-exon-scaffold_253-1491911889:655270..655325 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1510915933:655270..655325 | TCONS_00055360-exon-scaffold_253-1510915933:655270..655325 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1575043694:655270..655325 | TCONS_00055360-exon-scaffold_253-1575043694:655270..655325 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1491911889:659791..659855 | TCONS_00055360-exon-scaffold_253-1491911889:659791..659855 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1510915933:659791..659855 | TCONS_00055360-exon-scaffold_253-1510915933:659791..659855 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1575043694:659791..659855 | TCONS_00055360-exon-scaffold_253-1575043694:659791..659855 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1491911889:663108..663205 | TCONS_00055360-exon-scaffold_253-1491911889:663108..663205 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1510915933:663108..663205 | TCONS_00055360-exon-scaffold_253-1510915933:663108..663205 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1575043694:663108..663205 | TCONS_00055360-exon-scaffold_253-1575043694:663108..663205 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1491911889:664580..664696 | TCONS_00055360-exon-scaffold_253-1491911889:664580..664696 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1510915933:664580..664696 | TCONS_00055360-exon-scaffold_253-1510915933:664580..664696 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1575043694:664580..664696 | TCONS_00055360-exon-scaffold_253-1575043694:664580..664696 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1491911889:665165..666387 | TCONS_00055360-exon-scaffold_253-1491911889:665165..666387 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1510915933:665165..666387 | TCONS_00055360-exon-scaffold_253-1510915933:665165..666387 | Clytia hemisphaerica | exon |
| TCONS_00055360-exon-scaffold_253-1575043694:665165..666387 | TCONS_00055360-exon-scaffold_253-1575043694:665165..666387 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:654172..666387 + |
Blast
BLAST of TCONS_00055360 vs. Swiss-Prot (Human)
Match: PHAR2 (Phosphatase and actin regulator 2 OS=Homo sapiens GN=PHACTR2 PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 4.791e-56 Identity = 103/168 (61.31%), Postives = 133/168 (79.17%), Query Frame = 1
Query: 148 GLASKVKRSDSLALKLGARPSRSELEGKNIIPTQSDDEKLALRSKVGTNLVRRLSQRPSKEELEQRNIYRTTTDEETHQKNLEETKRQLSRKLSRRPTIKELRKKKIIGFNEYVEVFEVQEYDRRADKPWTRLTPKDKASIRKELNEYKEYEMDVHEESKIYTRFHRP 651
LASK++R D+LA+KLG RPS+ ELE KNI+ S++E+ +R ++GT LVRRLSQRP+ EELEQRNI + +EE + +E KR+LSRKLS RPT+ EL+ ++I+ FNEYVEV + +YDRRADKPW RLTP DKA+IRKELNE+K EM+VHEES+ +TRFHRP
Sbjct: 468 ALASKIRRRDTLAIKLGNRPSKKELEDKNILQRTSEEERQEIRQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKME-LKRRLSRKLSLRPTVAELQARRILRFNEYVEVTDSPDYDRRADKPWARLTPADKAAIRKELNEFKSTEMEVHEESRQFTRFHRP 634
The following BLAST results are available for this feature:
|
