TCONS_00055239 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055239
Unique NameTCONS_00055239
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1784

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055239 ID=TCONS_00055239|Name=TCONS_00055239|organism=Clytia hemisphaerica|type=transcript|length=1784bp
tggaaaacaaaCAACTAGTTGTCAAGGAAACTAATGAACAATCACGTTGT
CAATCGTGCTGGGATTGGTTTTCCAGATtctttatcaaaaactttttacc
gATATCTCTCATCTTTGCGGTTGCATTTGGTGCACTGGTTCCTGCGCCAG
GGGTGTTTTTCAACCATAAAGAAACAATCTATGTTTGCGTATCAATACTG
TTCTGTTATGTGGGTTTATATTTGAAAACGAGTGATATCCAAACTTCCCT
TAAAGCTTACAAGGCGTATACATGGGGTATTATCAGTGTTTTATGTGTGA
CGTGTGTTATTGGAGGTTTGCTGACAGATCAATTGAACTTTAAAGAACTT
GATATTGAATCTCATAAGAGTAGGAACACCACTATCCTTAGCAATCTTAC
CAAGACAACTGAAATACCCAGCAGTGAAGATAAAGGAGTCGTTCTTGGCC
CTTTTGAATGTCGTGTTGGTCTTGTATTATATTTCATTATGCCGTGTACT
GTTGGGTCTGGAGTCATTATGttAATGAATTTGAAAGGTGATATTGCAGT
GGCCATTATGATCACCGTGGTTACAAATATTGTTGGCATTTTCACTATCC
CATTATATTTGGAATGGCTAATTTATTCGGATGTTGATGTCCAATTTAAT
GTTGGAAAAATGATGCTTAAGTTGTTCTTGACATTGTTCATACCTTTGGC
GaTCGGCAAATGTCTGCGCTTCATTACGAAGATTCGAACATTCATCAGTG
TGCCTAGCACGAAGAATAAGTTAAAGATGATCGCTTTTTCCGCACTAGCC
TTTATCCTTCTTGTCAAAACAAGTCAGTCTAGTCATGATGGCGGACTCAA
ACAAATCAATGGATTGACAGCTGTGTTTATATGTGTATGGGCGTTAACCA
TGCATCtagttttcattttattgaatACGACAGTTTCATTCTTACTGAGG
CTACCAACGGACCAGAAAAAGACGATAATTATATTGGCTAGCCAGAAGAC
ATTATCGCAAGCCGTGGCAGCCACTGTATTTCTTCCTGACGGTGTCGGCG
ATCAAGGTTTGATAGCAGTCACCATGGTGTTTTGTCATATCACCATTTTA
GTTTTCGACTCCCTTCTCATCCCAATGTGGGTACACCTTGAGAAGCGTta
caaaaagaagaaggaagGAGACATGCATGATGAAATCGAAGCGCAAAAAA
AGTCCGCTTATTTAGAATAGATGATATTTATTTAGAAagtttgcaaaatt
aaagtctgaaaacaaatcacgcttttactcgaaatttttatgtgcttgtt
acaagacatttatttctgattggttcaaatttattgacactaataaagtt
ataagctgtaagttgtaaagcaaaaactcctactcttcggaatatgagca
ctgctcttgttttgaatattgaaattctccggataaatcgcatgcgcaca
aATTTTGGAATCATTGCACTATTCTTACGATAAGCTAAGAATTAAACTTT
TACGTGATGGAGAGCCAAAATATAGACGGTGCCGCTTCTTTGTGTGAATG
TCAAAGGGTGTCAAAGGGTGTCTTCGGAACATTGACAGTAAAAACCTTGA
AAGTTTCTTAGAAAATTACCTTCAATCTTTGAATTTATCCAACAGTTAAA
GCAATTGTAGTAtgtataaattaaaaaaagccttgaaaCTAATAGCATGG
ATATCCAAAGtttaaatttcagaaaaataacgaCGATAgaaatgattgat
tgattataAATATTGATTATAATAGAATTTAGAC
Run BLAST on NCBI

protein sequence of TCONS_00055239-protein

>TCONS_00055239-protein ID=TCONS_00055239-protein|Name=TCONS_00055239-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
ENKQLVVKETNEQSRCQSCWDWFSRFFIKNFLPISLIFAVAFGALVPAPG
VFFNHKETIYVCVSILFCYVGLYLKTSDIQTSLKAYKAYTWGIISVLCVT
CVIGGLLTDQLNFKELDIESHKSRNTTILSNLTKTTEIPSSEDKGVVLGP
FECRVGLVLYFIMPCTVGSGVIMLMNLKGDIAVAIMITVVTNIVGIFTIP
LYLEWLIYSDVDVQFNVGKMMLKLFLTLFIPLAIGKCLRFITKIRTFISV
PSTKNKLKMIAFSALAFILLVKTSQSSHDGGLKQINGLTAVFICVWALTM
HLVFILLNTTVSFLLRLPTDQKKTIIILASQKTLSQAVAATVFLPDGVGD
QGLIAVTMVFCHITILVFDSLLIPMWVHLEKRYKKKKEGDMHDEIEAQKK
SAYLE
Run BLAST on NCBI

transcript from alignment at scaffold_251:696604..712511-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055239 ID=TCONS_00055239|Name=TCONS_00055239|organism=Clytia hemisphaerica|type=transcript|length=15908bp|location=Sequence derived from alignment at scaffold_251:696604..712511- (Clytia hemisphaerica)
TGGAAAACAAACAACTAGTTGTCAAGGAAACTAATGAACAATCACGTTGT CAATCGTGCTGGGATTGGTTTTCCAGATTCTTTATCAAAAACTTTTTACC GATATCTCTCATCTTTGCGGTTGCATTTGGTGCACTGGTTCCTGCGCCAG GGGTGTTTTTCAACCATAAAGAAACAATCTATGTTTGCGTATCAATACTG TTCTGTTATGTGGGTTTATATTTGAAAACGAGTGATATCCAAACTTCCCT TAAAGCTTACAAGGCGTATACATGGGGTATTATCAGTGTTTTATGTGTGA CGTGTGTTATTGGAGGTTTGCTGACAGATCAATTGAACTTTAAAGAACTT GATATTGAATCTCATAAGAGTAGGAACACCACTATCCTTAGCAATCTTAC CAAGACAACTGAAATACCCAGCAGTGAAGATAAAGGAGTCGTTCTTGGCC CTTTTGAATGTCGTGTTGGTCTTGTATTATATTTCATTATGCCGTGTACT GTTGGGTCTGGAGTCATTATGGTGAGTCAGCTTATTTCACATATTGGTTT TCTACAATTTAATGTTTGCAGCCCAAACACATAGAGAAAGTGTCTATTTC GCATCTATTGTTTCATTTTCAAAACAAAGTTAAAACGCATGCGCATATTT TTATTTTATAAACTGTTAGTCGTTATTATAAGCAAAACACAAAGAGGAAT GAATACGCAAGGATGGTACAGTCACTTTCGGTCGGGCTTGTGGATGGTGA AATTTGTCGTTCTTTTTTTAATGTGTCGTTCTTTTTTAATATTGTTGCAA AGTGGGCACTTTCTCCCCCTCCAAACAAACAAATGAACAATCACGTTGTC AATCATGCTGGCATTGGTTTTCCAATTTCTTTATCAAAAACTCTTAAAAT ATTCTTACAGTATAATAATAAAAGGGAGAAAAGTTTAGTATAGTAAAAGA ACTATTTATAGAACATGAAATTTAGAAAAAATTATAATTAAATTGGAAAT AAGAAAAAACTAACATTTACCATTAAAACACCAAAAATCCCACCTGAAGA AATTAATCCCCACCTTAACTGGTTTTTCCCACCTGGAAACGGGTGTGTTT ATGGATGATTTTTTTCAACAATTCCAGTATATTTTCTTGATTTTTTTTAG TTAATGAATTTGAAAGGTGATATTGCAGTGGCCATTATGATCACCGTGGT TACAAATATTGTTGGCATTTTCACTATCCCATTATATTTGGAATGGCTAA TTTATTCGGATGTTGATGTCCAATTTAATGTTGGAAAAATGATGCTTAAG TTGTTCTTGACATTGTTCATACCTTTGGCGGTAAGTACTTTAATGTATAA TGTCTAAATTTTTGCGGCCAGAAATTTTCGCGATTTTGGCGAATTCGGTA AATAAAATAGTCGCGAAGAAAGTTTTAAAAGTTCAAATTCGTAAAATATT TAATTTTTTAAACTACTCATCCTTTTCTGAAGTTTTTATAGCGAACGACT TTAAATGGGCTTTTCCATAAAAAAACCCCTGTTGAGGAAGTCCATCCCTC TGTGGCTGGAAATGCTGTAACCCCCTGGAATTCCAGGCAATTTCAGGTTT AAACCCCTCTGAATTTTTGTTAAAAAGCTACCCTCATGGAATTCCAGTTA TTTTTGACAGATTTTTGTATCTCTCTATGGAATTCCGCCACATATCAAAC CTCAACAGGGGATATTTTCAAAGTTTTTTTCAAAGCCCAATAATCATCAG AAAACAAATACTTTCACTCTCTACTATATTATAAGGAAAATTATGATATC GTTTACTCTATCCTCATGATTTGCATATTTAAATTCCCGCGAAAAATTTT ATTAACTCAAATTCCCGCGAATTATGAAAACAATTTCGCTGATGGCCTGG CTGGCCACGTTGTTTATTAAGTTTTTTGTTTTTAAACATTAGTTTGATTG TGTGATGGTGGAATAAATGCCTATTAAAAATTTATGTTCAGCATTAAGGG AACTTCTTTTGACGAGGACTAATTTTAGCTAGCAGCAAATAATCTGGAAA ATTTTTAATCTCGGTGAGAACGATCGGTCAAACTTTTTGGACCTACCTCG GAGGTCCTGATTTGTCCTTTGGCTTTTCTTGGGATTGGCCCATTACTTTT TTCTGATATTTTGCATAATGATGCGTAAGTATCGGAGCCCAATTCTCAAA AAAGAAGTTTTTGGGCAAATTTGGGCCAAAGAGTGCCTAAGAATATGAGG TTTTTTGGACTTTGTGCGAAATTGCTTTATTATTTTTTTCTGATTTATTG CATAAAGATAAAGGTGACTGAAGTATTTATTTTCGCCGTAAAAACAGGAT TTTCTTATTTGGGGAAATTCCCTTTTTTCATTTTTAAGGAAAATGAGCAT TTCTAAAAAAGGGTTAATTAGTTTGTTCTGTTTTTTTGCGCAATGATGCG TAATGGTAATCCTTCAATCAAGACTTATCAAGGTTATCAAAAGAAAAAGT TTTAGCCAAATTTGGGGAAGTTGTTTCATTAGATTTCTTCTTTAAAGAGA CAGTTATCATCTTTACAGGAAATAAAGGACTATTTTTGATTATGCCCAGA ACTAAGCATAGTTTGATTACACCGAGCCACTTATCAGCGCCACAAAGTCT ATCAAAAAGCTATAAGTAGCTTCCCCTGGCATAGTTACTGAATATTAAGA AGCAAGAGTCGTCAACGTAGGCTATTCAATTTTTCCATTCAGCCTTGTTC CCAGTTGTTCCTTTTGTTAGTTAATTGCTGAATACCGTTGGTCTAATGTC GACATCCCTCTCCTAATTTCGACACCCTTCTTTAGAGATAGGAATAATAG GAAGGACGGGATCACTGATAGACTCCTCAACTGATTGTTAAGCAAAGACA ATTAATTTCAATTAGCGATTGCGACCCACCTATTATTCGTATCTCTAAAG AAAGGTGACGAAATTAGAAGAGGGTTGTCGAGATTAGACCAACTTACGGT TTTTAGTAGGGAGCCATCAAAGAAGAGTATTTTTTTAGTTCCTTTTAAAA ACCGTTTCGGGGTTTATACTACCGTATAAAGGTTGTTCATCTTTTATTAA GTTACTTTTTTTTTCTGGGAAAAATATACCGGGTGTCCCAGAAAAAAGTC TCCCTCTTTGGTATAAATTTTCTTTGGTTCTATGAACTTTTCAAGAATCA ATTTTTTGCATAGAAAGAGAAACGATAAACTCGCATTTTGAGGGGTCATT TTTGTCAAATTTGGCCAAACAGATCAAAAGTTATGCAGTCTTAATGCTTA AACATGACTTTTCAAATTCAGGACCCTTGTTAACCGACACAATACATACT AATTAAATATATAATATATACAACATTCACACTATTAAAAAATAAAGAAA ACTAAAGAAAAATTATATACAGTTTTTTTAAGTTACGTAATTTCCACCGA GCAAACATTCGAATGTGTAATGGGAAATTTGTATGAAAGGTGGTTATTTA CGCAAATCGAACGTTTGCTTCGATAATGGCAGAAGTTACGTAACTTAACA ATACATGAAAAATAAGTAAAGTAAGTCAGTCTGTGACCGCAGTCGGAGGC GACCCGAAGGCTCCTCTTTCGATAGCTGTCTATTCCCTGCCCTCCCCCCG CCACTCTTTCTCCCTTGATTGCTCCACTTACCCTTGATTCTTCCCTTAAT TGCCGAGTATCAAGCACAGAGGCATCATATACCATTTTAAAGAAATCTTT GGTATAAACCGGCTGAGGTTTGAACCCACGACCTTGTACACCGTAGCCGG ATGCTCTACCCCTGCACTACGTTCGCTTGAAACATGAAAAACCACCATAG CTGAATAAACTTTATTTGCTGCTCTCTATTTTTCTTTTGCCTACCACTCT GAAAAAAACCCAAAACCCCTGTAGAGAGCCATGTCAACTGAGTATCAAAA AACCTTGAAAACCTTGAAAATCCCGAAAAAAAAATCCGTAGACACTCTGA CTACGGTCGCTTGAAACATGAAAAATCACCACAGCTGAATGCTATAGTAT TGTCCCTGAATCGTTTAGAAAGTGAACACTACTCGGCCATAAATCCAGAT CTCACCAATATTGTTATAATCCGTTGAAAACTGTAGAGGTTGGAAAGCTT GAAACTCGTCTGCGTATTGCATACATGAAATATTCTTCTGTGTTCCCAAT GTACCTGTGTTGCCGAAAACGGTCACGCGGCTTTGACCACTGTCATGTAG GATAGTTTCTAGCCGCATGTTATCGTTTCGTCGATCATGAGGACTGGACA GGATAGGTAATCGATTGACGAAGATGACGTAATTAATGAATACACGTTGT TTGAATGTGGCTTTGATCCAGTGTGGTGTGGGTGATCGAGCAGTATGACT GTAGACATTGTTGTTGCCATCGAACGCCTTTATTGCCGGAAAATCTCCGG TATTGTGATCTGATGATTGAGATGCTGTTTCGATGTAATCTCGCAGCGAT TCTAAAAAAAGATAACAATAAATTCTCTTCTTTGTAGAAAGCTCTACGAG TCTCTTTTCTTTTGGTGCAAATCCTACAATCTCATTCAAAATATATTGAG AATTTTGGTTAATTCCTCGTTTTTAGCATTTAAAGTTCGGGCGAGAAAGT GGCTTTTGGGCCATTTGTTGGATTTAATCCTCGGGCCGTTCTTGAGCTTT TGGATTAAGTCTCATGTTAAAACTCAGAGTTAAAACTCTACCGTTACAAC CTAAGTTAAAGCGCTTCCAAATCGATTGTGGCTATGAGATTTCGTGGGAG TTTCCCTTTTTTCTCAAATATTATTGTACCTTAGCAAATTCATCATATTC ATGACGTAATGTTTTATACGGAGACACCCCGGTTTTTACAAGTAAAGAGA AATCTTTCTTCAGCTTAAATCTGCTACTACTGAAAAAATCGATATGTTCC CGTAGAAAACGTCACGTCATGACTATTATGAATACACATAACAATACATA GAGCGTAGGGAGACTAAAGAGAAGAAAATGTTTTTTTAAGCCGAAAAATC TCAAACCATCTCACCAGTTGTAAAAGAGACACATTTATGAGTATCAAAGC AAACGTCTTTACATCTCTCATTCGGTTGACATGGGTTGTTTGCTGTACAC CACGGTCCGAGCTATGAGAAAAAACTAAATCTATTACACAAGTCAACTCT CTCTAATTACTTACTTGTGTTACTTGTGTGGTTGTTCGAGCATCCTGCTT CAGGTAAGGTTCTTGGTGAACCANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATTTATTATTATCTTTCTATAATTCGAACTAGAATATTGGTATCCTCAGC TAGAAGCTAGTATAAAATACTCTTTATAATTCGAATTTTTCCCTAATTCG AAGATCATCCCTGGTCCCTCGAGGATTGAATTAGCGTAAGCTAACTGTGC AAATGAAATGTATATAATGGCTTAAAATTTGCGCAAATTTAATTTGGTGT ATGACGGAAAAATAGATTTTGGTGGGAATTAAAGTCTGTGTCAAAAAGGT GTAAAGTGTTTTTATTTCTGACCATAACTTTCCAAGCTTTTTTTTTATTA TTCGATTTTAAATGCTTGGAAAGTTATTGGCAAAAATAAAAACACAGCAC ATCTTTTTAACACTGACTTTAAATTTGGCGGATTTTGGATAATGATTTTT CATAATTTTGTCCAGGGGTATTTTGCTCTGTGTATAGGTTTTAATGATTT AAGTATGTAAACTTAGATTCACTTTCTGTGAATAAGGAGGATGTCCAAGT GGTCAAAGCTAAGGTGTTAGCCTTTCAAACCAAGTATTCACGGTTCGAAT CCCCGCTCCTGCCAAAGTTCCATTCAGTACAAAAATAGCCGAGCTGGCTG GCCGTGGACCCCGTGAAAACTATCGAAAAACTGCCTAAAAGTCCTAGATT ACTGTGCTATCCATGTTAAATATCGACACTATCTAAATATGCGAATTATT CCCTACCGTGATGATGTTAAAGTCAGTCTCGAAGTGATTCCAGCCTCTAT CTGACACAAGGACTGCGTTGCCCGTCCGATTCCTCTGGACGGAGGACGCC AACAAATCACAGCTGTTATTACCACGGAAATGATTGACTGATTGACAAGT GTCATGCCACATACACTTTGTTAAACATTGTCTTAAGGATATTGATTGGA GGAACGTAATAAAATCTCCGATCAAACGTTGGTTGTATTTGATCTTTGAA AAAATGGCGTCGTATTTTTTGCATTCAGGCAATTTTAAAATATACGGAAA CGTTATGTTGATAGCAGTTAAAATACACAAAATAAAAATTTGCTTCTTCT TCATTTTAATTTCGACTTTCTCTCTCGGTCACATCACATTCACATCACAT CAATTTTTGTTTTGACTTCTCCTCTCGGTCACATCACATTCACATCACAT CAATTTTTGTTTTGACTTCTCCTCTCGGTCACATCACATTCACATCACAT CAATTTTTGTTTTGACTTCTCCTCTCGGTCACATCACATTCACATCACAT CAATTTTTGTTTTGACTTAAAAATTTATCACCTCAATATCATTTGATTTC TCAAAAAAAGTTTAACAGATTTAAATTAAATTCAACTTGTGATTCCTCCA TTCAATAAAGCAAAATCCCATGTTAATGCCGTGGCATTGTTTTAGCAACT GTTTTGTTCGATTCAATACAGTTTTAATATTTCATGGTTTGTTGGCTGGT GAATCTCTTCTATACTATTGTATTCACGGAGAGAGGGTGTCATATTTTAT ATTATCGATTTAAGTATCTTTCTTAATACGAAATCTACTTTAGGGACATG CAAAAAATAAATATTAAATAAACGTAATTTTTAAAGTTGACTAAATTTGC TAAAATCAGCCAAAGTTTAGCCTATATGTTAAGCTAAGTTTTTTGAAGCA AAGGAAAAAGACGTTTTTTTCTTCATCATTTTCAATTTTTCAAAACTTTT AATTTATCTTCAAAATTAATTCTAAAAATATCTTTCCAACAGTGCATAAT TGGTTCGTTTTCCTATTTTATGGCTTTTCCATAAGGATGCATAATGGCAA TACTCAAAATGTGACGGAGCCCGATTTTTGATAAAAAATTTTTTTCCGAT CTACAAAAATTGATTTGTTTATTACATATCAGCAAAGCTTAAAATGTGAT AGAGCCCAATTTCTGCCATTTTTGCGAAATTAAAACTCGCGAAAGCGCGT GAGAATCCTGACTCGCGAAATCAAATCCACCACAAAATTTTCAAAATCGC ATATTCGCCGGAAAAACCAATCCATAGTTTCCATTTTTGACAAAAAATAG CAATTTTCAGCTGTTTTCAGGCTTATTCGCAAAATTTTCAAAACTCTGAC TCGCGAAATTAAATCCAGAAAATTTCGCGATTTTTTTTTGAACGCGAAAT TTAATCTCGTGAGCTTTTTTTTCTATAAGTATAACGTTTATAAGCATATG CAGGCTCATTTTTTGGTTCATAAACAATGGCTCTATCGTTTAAGAATAAT AAAATGCTAAGCATAACACGAGACTGATATAGGGGTAAAAAATAGCTATG CTTATAGAAAAAAAAACATTTAACTTGTTTATTTTGACCTGCAAGCTTGA GGACGGTAGAAGTTCTGATTTGAGGTTGTCCTTGGTCCTCAGTAAGTCAA GATGAAGACATGAATAACTCACTCTTTCTGCTACAGGAAAAAAGTACAGG GTGTACTAACCCATAGAGGTTACTTACTTGATCTTTGGATCTTTTTCTCA AAAGTTTAGACCACCAACTTTTTTAGTACACTGTCTGTACTGACTTTTGC CACGGCTGGCCACGGCAAGAGCTTTGATACCACCCTTTAGTACACTGTAC TGACTTTTGCCACGACCAAAGTTTTGATACCACCCTTTAGTACACTAAAC TAACTTTTGCCACGACCAGAGCTTTGATAACACCCTTTTAGTACACTGTA CTGACTTTGGCCACGGCAAGAGCTTTGATACCACCCTTTAGTACACTAAA CTAACTTTTGCCACGACCAGAGCTTTGATAACACCCTTTTAGTACACTGT ACTGACTTTGGCCACGGCAAGAGCTTTGATACCACCCTTTAGTACACTAA ACTAACTTTTGCCACGACCAGAGCTTTGATAACACCCTTTTAGTACACTG TACTGACTTTGGCCACGGCAAGAGCTTTGATACCACCCTTTAGTACACTA AACTAACTTTTGCCACGACCAGAGCTTTGATACCACCCTTTAGTACACTA AACTAACTTTTGCCACGACCAAAGCTTTGATAACACTCTTTTAGTACACT GTACTAACTTTTGCCACGGCAAGAGCTTTGATACCACCCTTTTAGTACAC TGTACTAACTTTTGCCACGACCAAAGATTTGATACCACCATTTTAGTACA CTGTTTTTCGTACTAACTTTTGCCACGGCCAGAGCTTTGATACCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TAGTACACTAAACTACCTTTTGCCACGACCAGAGCTTTGATCCCACCCTT TTAGTACACTGTACTGACTTTGGCCACGGCAAGAGCTTTGATACCCCCCT TTTAGTACACTGTACTACCTTTTGCCACGACCAAAGATTTGATACCACCA TTTTAGTACACTGTTTTTCGTACTAACTTTTGCCACGGCCAGAGCTTTGA TACCGCCCTTTTAATACACTGTACTAACTCAAATTTAACTTGAAGAATAC ACACTTCCCCAGCTATGGGTCAGTACATTACGAGCCAGTAGTTCGAATGT CCGCCCTGACAGATGAGATATGAACGGGCTAACTACCAAACCAAATCAAA CAAGAGCTTGTAAAAACTCCACCTCGTCCCCTCCCTCAAACACACCATAA ATTCGCAAGTGAGTGAGGAGTGAGTGGAGTACACTAAATCTTTATCTGAT ATTCCGATGGCGGATTGGTGGCCGCCCACGCTAAAGCTCTAAAGGGAGCG GGCCAATTTCCCATCGGAGAGGAATGATAGTCGGCCTTTGATGTGCCGCA TCTTCAGTCGGGTTCAACAGCCCTTGCCTGTAAACCTAAAAATATTTCGG TTGGACCCGCCAATCCCCGAAAACGAGGGCTGGGTTACCAGACCTCCTGC TGCAAAATCCTTGACGCAGTCTTGCAAAATTCCGTAATCTAAACCTTCCA GATGTGGAAAATTTTCCCGACCTTCAGAGCTCTAGCGTGTCGGATGAAAA TTTCACCATCTGGGTGCCAGATAAACTAAATCTGGACAAACTCGCTAACC TCTCGTGCAAAGAAAGCTATTTCATCTGGAGACACAAATTTGAAATGTGA ATTATTTTAAAAATTCTTATTTTCAGATCGGCAAATGTCTGCGCTTCATT ACGAAGATTCGAACATTCATCAGTGTGCCTAGCACGAAGAATAAGTTAAA GATGATCGCTTTTTCCGCACTAGCCTTTATCCTTCTTGTCAAAACAAGTC AGTCTAGTCATGATGGCGGACTCAAACAAATCAATGGATTGACAGCTGTG TTTATATGTGTATGGGCGTTAACCATGCATCTAGTTTTCATTTTATTGAA TACGACAGTTTCATTCTTACTGAGGCTACCAACGGACCAGAAAAAGACGA TAATTATATTGGCTAGCCAGAAGACATTATCGCAAGCCGTGGCAGCCACT GTATTTCTTCCTGACGGTGTCGGTGAGGAATTGTTTTTTTATAACGATTC AATTTCACGAATCAGCCAAAAAGAACCAGTTGAGAATGGGCTCTTCCAGA AAATGTTCTTACATGGGGGTGGGGGCTGGAAGATATAGTGTCCGGGGGAT AGTGAAAAATCTACAAAATTTGCCTTCTCCGGGGATAAAATTGTTCTGTT TGAGGGTTATTTTGAATGTCCAGGGGGTCAAGTGATGCTTATCCGGGGGG CTAGACCTGCTGTCCAGTTGGTCAAAACTCACAATTTCCGGGGGGTTAAT TTCCAAAAATCCCCCCATATTCAAATTTTTTCTGGAAAAGTCCAATGGCC CTGAAACGCTTTGTCACGAATGGTTACAGGGTATATTAAACCGAAAATCT GAGCTTAAAACTTTCGCGAGTATTACCTTATTTTGGCGGACAGCAAATAT CCTAAATTTTTTTAATTTTGGCGGTAACTTATTTTGGCGAATAGTGAATT TTTTTTATTTTGGCGGGAACTAATTTTGGCGAACGACAACGTAAATCTGT TCTATTTTGCCTTATTTTGAGTAATTTTGATAAATTTCAGGGGTTATTTA GGCAAGAAAACAAAAAATATAATTTTGGCGGGAACTTATTTTGGTGAGTG AGCAAAGTATTTAATTTTGGCGGGAACTAATTTTGGCAAATTTCGTCTAA ATTCGCCAAATCCGCCAAAATTAAGGTAATTTGGCGAAAAAAGCGGCCAA AAATTCGCGAAAAACGTAAAAAGAAAACTCTTGAAAATTAATCCGAGTAA AGTAATTTTACTTTTTGTCAACCCGGGCCATTCATTTAATCAATTTTTTT CTCTTTATTTTTTTTCCACAGGCGATCAAGGTTTGATAGCAGTCACCATG GTGTTTTGTCATATCACCATTTTAGTTTTCGACTCCCTTCTCATCCCAAT GTGGGTACACCTTGAGAAGCGTTACAAAAAGAAGAAGGAAGGAGACATGC ATGATGAAATCGAAGCGCAAAAAAAGTCCGCTTATTTAGAATAGATGATA TTTATTTAGAAAGTTTGCAAAATTAAAGTCTGAAAACAAATCACGCTTTT ACTCGAAATTTTTATGTGCTTGTTACAAGACATTTATTTCTGATTGGTTC AAATTTATTGACACTAATAAAGTTATAAGCTGTAAGTTGTAAAGCAAAAA CTCCTACTCTTCGGAATATGAGCACTGCTCTTGTTTTGAATATTGAAATT CTCCGGATAAATCGCATGCGCACAAATTTTGGAATCATTGCACTATTCTT ACGATAAGCTAAGAATTAAACTTTTACGTGATGGAGAGCCAAAATATAGA CGGTGCCGCTTCTTTGTGTGAATGTCAAAGGGTGTCAAAGGGTGTCTTCG GAACATTGACAGTAAAAACCTTGAAAGTTTCTTAGAAAATTACCTTCAAT CTTTGAATTTATCCAACAGTTAAAGCAATTGTAGTATGTATAAATTAAAA AAAGCCTTGAAACTAATAGCATGGATATCCAAAGTTTAAATTTCAGAAAA ATAACGACGATAGAAATGATTGATTGATTATAAATATTGATTATAATAGA ATTTAGAC

Coding sequence (CDS) from alignment at scaffold_251:696604..712511-

>TCONS_00055239 ID=TCONS_00055239|Name=TCONS_00055239|organism=Clytia hemisphaerica|type=CDS|length=4872bp|location=Sequence derived from alignment at scaffold_251:696604..712511- (Clytia hemisphaerica)
GCGATCAAGGTTTGATAGCAGTCACCATGGTGTTTTGTCATATCACCATT
TTAGTTTTCGACTCCCTTCTCATCCCAATGTGGGTACACCTTGAGAAGCG
TTACAAAAAGAAGAAGGAAGGAGACATGCATGATGAAATCGAAGCGCAAA
AAAAGTCCGCTTATTTAGAATAGATCGGCAAATGTCTGCGCTTCATTACG
AAGATTCGAACATTCATCAGTGTGCCTAGCACGAAGAATAAGTTAAAGAT
GATCGCTTTTTCCGCACTAGCCTTTATCCTTCTTGTCAAAACAAGTCAGT
CTAGTCATGATGGCGGACTCAAACAAATCAATGGATTGACAGCTGTGTTT
ATATGTGTATGGGCGTTAACCATGCATCTAGTTTTCATTTTATTGAATAC
GACAGTTTCATTCTTACTGAGGCTACCAACGGACCAGAAAAAGACGATAA
TTATATTGGCTAGCCAGAAGACATTATCGCAAGCCGTGGCAGCCACTGTA
TTTCTTCCTGACGGTGTCGTTAATGAATTTGAAAGGTGATATTGCAGTGG
CCATTATGATCACCGTGGTTACAAATATTGTTGGCATTTTCACTATCCCA
TTATATTTGGAATGGCTAATTTATTCGGATGTTGATGTCCAATTTAATGT
TGGAAAAATGATGCTTAAGTTGTTCTTGACATTGTTCATACCTTTGGCGG
AAAACAAACAACTAGTTGTCAAGGAAACTAATGAACAATCACGTTGTCAA
TCGTGCTGGGATTGGTTTTCCAGATTCTTTATCAAAAACTTTTTACCGAT
ATCTCTCATCTTTGCGGTTGCATTTGGTGCACTGGTTCCTGCGCCAGGGG
TGTTTTTCAACCATAAAGAAACAATCTATGTTTGCGTATCAATACTGTTC
TGTTATGTGGGTTTATATTTGAAAACGAGTGATATCCAAACTTCCCTTAA
AGCTTACAAGGCGTATACATGGGGTATTATCAGTGTTTTATGTGTGACGT
GTGTTATTGGAGGTTTGCTGACAGATCAATTGAACTTTAAAGAACTTGAT
ATTGAATCTCATAAGAGTAGGAACACCACTATCCTTAGCAATCTTACCAA
GACAACTGAAATACCCAGCAGTGAAGATAAAGGAGTCGTTCTTGGCCCTT
TTGAATGTCGTGTTGGTCTTGTATTATATTTCATTATGCCGTGTACTGTT
GGGTCTGGAGTCATTATGGCGATCAAGGTTTGATAGCAGTCACCATGGTG
TTTTGTCATATCACCATTTTAGTTTTCGACTCCCTTCTCATCCCAATGTG
GGTACACCTTGAGAAGCGTTACAAAAAGAAGAAGGAAGGAGACATGCATG
ATGAAATCGAAGCGCAAAAAAAGTCCGCTTATTTAGAATAGATCGGCAAA
TGTCTGCGCTTCATTACGAAGATTCGAACATTCATCAGTGTGCCTAGCAC
GAAGAATAAGTTAAAGATGATCGCTTTTTCCGCACTAGCCTTTATCCTTC
TTGTCAAAACAAGTCAGTCTAGTCATGATGGCGGACTCAAACAAATCAAT
GGATTGACAGCTGTGTTTATATGTGTATGGGCGTTAACCATGCATCTAGT
TTTCATTTTATTGAATACGACAGTTTCATTCTTACTGAGGCTACCAACGG
ACCAGAAAAAGACGATAATTATATTGGCTAGCCAGAAGACATTATCGCAA
GCCGTGGCAGCCACTGTATTTCTTCCTGACGGTGTCGTTAATGAATTTGA
AAGGTGATATTGCAGTGGCCATTATGATCACCGTGGTTACAAATATTGTT
GGCATTTTCACTATCCCATTATATTTGGAATGGCTAATTTATTCGGATGT
TGATGTCCAATTTAATGTTGGAAAAATGATGCTTAAGTTGTTCTTGACAT
TGTTCATACCTTTGGCGGAAAACAAACAACTAGTTGTCAAGGAAACTAAT
GAACAATCACGTTGTCAATCGTGCTGGGATTGGTTTTCCAGATTCTTTAT
CAAAAACTTTTTACCGATATCTCTCATCTTTGCGGTTGCATTTGGTGCAC
TGGTTCCTGCGCCAGGGGTGTTTTTCAACCATAAAGAAACAATCTATGTT
TGCGTATCAATACTGTTCTGTTATGTGGGTTTATATTTGAAAACGAGTGA
TATCCAAACTTCCCTTAAAGCTTACAAGGCGTATACATGGGGTATTATCA
GTGTTTTATGTGTGACGTGTGTTATTGGAGGTTTGCTGACAGATCAATTG
AACTTTAAAGAACTTGATATTGAATCTCATAAGAGTAGGAACACCACTAT
CCTTAGCAATCTTACCAAGACAACTGAAATACCCAGCAGTGAAGATAAAG
GAGTCGTTCTTGGCCCTTTTGAATGTCGTGTTGGTCTTGTATTATATTTC
ATTATGCCGTGTACTGTTGGGTCTGGAGTCATTATGGCGATCAAGGTTTG
ATAGCAGTCACCATGGTGTTTTGTCATATCACCATTTTAGTTTTCGACTC
CCTTCTCATCCCAATGTGGGTACACCTTGAGAAGCGTTACAAAAAGAAGA
AGGAAGGAGACATGCATGATGAAATCGAAGCGCAAAAAAAGTCCGCTTAT
TTAGAATAGATCGGCAAATGTCTGCGCTTCATTACGAAGATTCGAACATT
CATCAGTGTGCCTAGCACGAAGAATAAGTTAAAGATGATCGCTTTTTCCG
CACTAGCCTTTATCCTTCTTGTCAAAACAAGTCAGTCTAGTCATGATGGC
GGACTCAAACAAATCAATGGATTGACAGCTGTGTTTATATGTGTATGGGC
GTTAACCATGCATCTAGTTTTCATTTTATTGAATACGACAGTTTCATTCT
TACTGAGGCTACCAACGGACCAGAAAAAGACGATAATTATATTGGCTAGC
CAGAAGACATTATCGCAAGCCGTGGCAGCCACTGTATTTCTTCCTGACGG
TGTCGTTAATGAATTTGAAAGGTGATATTGCAGTGGCCATTATGATCACC
GTGGTTACAAATATTGTTGGCATTTTCACTATCCCATTATATTTGGAATG
GCTAATTTATTCGGATGTTGATGTCCAATTTAATGTTGGAAAAATGATGC
TTAAGTTGTTCTTGACATTGTTCATACCTTTGGCGGAAAACAAACAACTA
GTTGTCAAGGAAACTAATGAACAATCACGTTGTCAATCGTGCTGGGATTG
GTTTTCCAGATTCTTTATCAAAAACTTTTTACCGATATCTCTCATCTTTG
CGGTTGCATTTGGTGCACTGGTTCCTGCGCCAGGGGTGTTTTTCAACCAT
AAAGAAACAATCTATGTTTGCGTATCAATACTGTTCTGTTATGTGGGTTT
ATATTTGAAAACGAGTGATATCCAAACTTCCCTTAAAGCTTACAAGGCGT
ATACATGGGGTATTATCAGTGTTTTATGTGTGACGTGTGTTATTGGAGGT
TTGCTGACAGATCAATTGAACTTTAAAGAACTTGATATTGAATCTCATAA
GAGTAGGAACACCACTATCCTTAGCAATCTTACCAAGACAACTGAAATAC
CCAGCAGTGAAGATAAAGGAGTCGTTCTTGGCCCTTTTGAATGTCGTGTT
GGTCTTGTATTATATTTCATTATGCCGTGTACTGTTGGGTCTGGAGTCAT
TATGGCGATCAAGGTTTGATAGCAGTCACCATGGTGTTTTGTCATATCAC
CATTTTAGTTTTCGACTCCCTTCTCATCCCAATGTGGGTACACCTTGAGA
AGCGTTACAAAAAGAAGAAGGAAGGAGACATGCATGATGAAATCGAAGCG
CAAAAAAAGTCCGCTTATTTAGAATAGATCGGCAAATGTCTGCGCTTCAT
TACGAAGATTCGAACATTCATCAGTGTGCCTAGCACGAAGAATAAGTTAA
AGATGATCGCTTTTTCCGCACTAGCCTTTATCCTTCTTGTCAAAACAAGT
CAGTCTAGTCATGATGGCGGACTCAAACAAATCAATGGATTGACAGCTGT
GTTTATATGTGTATGGGCGTTAACCATGCATCTAGTTTTCATTTTATTGA
ATACGACAGTTTCATTCTTACTGAGGCTACCAACGGACCAGAAAAAGACG
ATAATTATATTGGCTAGCCAGAAGACATTATCGCAAGCCGTGGCAGCCAC
TGTATTTCTTCCTGACGGTGTCGTTAATGAATTTGAAAGGTGATATTGCA
GTGGCCATTATGATCACCGTGGTTACAAATATTGTTGGCATTTTCACTAT
CCCATTATATTTGGAATGGCTAATTTATTCGGATGTTGATGTCCAATTTA
ATGTTGGAAAAATGATGCTTAAGTTGTTCTTGACATTGTTCATACCTTTG
GCGGAAAACAAACAACTAGTTGTCAAGGAAACTAATGAACAATCACGTTG
TCAATCGTGCTGGGATTGGTTTTCCAGATTCTTTATCAAAAACTTTTTAC
CGATATCTCTCATCTTTGCGGTTGCATTTGGTGCACTGGTTCCTGCGCCA
GGGGTGTTTTTCAACCATAAAGAAACAATCTATGTTTGCGTATCAATACT
GTTCTGTTATGTGGGTTTATATTTGAAAACGAGTGATATCCAAACTTCCC
TTAAAGCTTACAAGGCGTATACATGGGGTATTATCAGTGTTTTATGTGTG
ACGTGTGTTATTGGAGGTTTGCTGACAGATCAATTGAACTTTAAAGAACT
TGATATTGAATCTCATAAGAGTAGGAACACCACTATCCTTAGCAATCTTA
CCAAGACAACTGAAATACCCAGCAGTGAAGATAAAGGAGTCGTTCTTGGC
CCTTTTGAATGTCGTGTTGGTCTTGTATTATATTTCATTATGCCGTGTAC
TGTTGGGTCTGGAGTCATTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034790XLOC_034790Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055239-exon-scaffold_251-1575043694:711991..712511TCONS_00055239-exon-scaffold_251-1575043694:711991..712511Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1575043694:711182..711361TCONS_00055239-exon-scaffold_251-1575043694:711182..711361Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1575043694:698190..698535TCONS_00055239-exon-scaffold_251-1575043694:698190..698535Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1575043694:696604..697340TCONS_00055239-exon-scaffold_251-1575043694:696604..697340Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1510915933:711991..712511TCONS_00055239-exon-scaffold_251-1510915933:711991..712511Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1510915933:711182..711361TCONS_00055239-exon-scaffold_251-1510915933:711182..711361Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1510915933:698190..698535TCONS_00055239-exon-scaffold_251-1510915933:698190..698535Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1510915933:696604..697340TCONS_00055239-exon-scaffold_251-1510915933:696604..697340Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1491911889:711991..712511TCONS_00055239-exon-scaffold_251-1491911889:711991..712511Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1491911889:711182..711361TCONS_00055239-exon-scaffold_251-1491911889:711182..711361Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1491911889:698190..698535TCONS_00055239-exon-scaffold_251-1491911889:698190..698535Clytia hemisphaericaexon
TCONS_00055239-exon-scaffold_251-1491911889:696604..697340TCONS_00055239-exon-scaffold_251-1491911889:696604..697340Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055239-proteinTCONS_00055239-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:696604..712511 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.71379 8.35061 6.27699 5.27735 11.9077 8.30548 9.97657 11.2909 9.04154 10.6122 5.91748 5.35279 4.67808 3.706 7.28248 8.51628 12.4738 9.53343 3.31775 3.25985 6.99694 6.15374 22.6081 20.7059 4.6987 7.50272 5.50353 4.14424 19.1336 18.1861
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR016833Put_Na-Bile_cotransptr
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055239 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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