TCONS_00055186 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055186
Unique NameTCONS_00055186
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length960

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055186 ID=TCONS_00055186|Name=TCONS_00055186|organism=Clytia hemisphaerica|type=transcript|length=960bp
TTCCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGT
GACTTATTACACGCACTCAAAAGCTAGATGGGTTGACCTGGCTGATATGT
TTCGATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCTCGGATGTTCGT
GGTCGTCTCAAATACTCCTCTGTTGATGTGATGCAGATTTGGACGTATTA
CAACGATGACCACACAGATACTATGGATGGAGACGAAATTATGGTGTTTG
TCTTTGACATGTTACAAAATCCGAAGCAGCGATGTAACCCAAAGATTATT
GACAGTTTGACTGCAAAACTTATTGAATTGTCTGGTGAAGAAGAAGTGAC
ACTCAGAGGATTTTCAAAGTTGTTACCACTTGAAGACAGCATCATGGACC
AATACAAAGACATCACAAAATTGGATCGAAAAGCGACTTTGCGTGTATTA
GCCTTCTATGATCAGAATGATGAGGGAGCAATCGATGGCTGTGAATTATA
CGCCCTTATTAAAGATGTTCTTGAATCGAACGGTCACAAAGATCCTTACA
ACATGGAAGTGATTCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGC
TTAACACCAAGTGGTGCACTGGATTACACCAAAACTGACATTGTTTTCGC
CCTGGGAACGGAGAAAGCCTCAGAAGAAGTCGTTTAATATGAACACATGC
TATAAAATTATCGACCCTTACGCCACAATTGGGTTGAAGATCCGAATCAC
AAGTCAATAAGATTTTTAACTTTACATAAATTATGAAAGTTTTGCTCCAC
TTTTTCAAGAATATGATGTATATACAAACTCAAACTGTACtgtaaataaa
acaattttgaaatcttGGTTACCCATATTACTTGTACCATATTATCCTGT
AAATaagcaaaatctaaaataaatcgATGTATAAACTTCAGTTATAATGA
AATATAGCCA
Run BLAST on NCBI

protein sequence of TCONS_00055186-protein

>TCONS_00055186-protein ID=TCONS_00055186-protein|Name=TCONS_00055186-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
FQENEAIYLTKFIKTFVTYYTHSKARWVDLADMFRYLEPFLLPHAFSDVR
GRLKYSSVDVMQIWTYYNDDHTDTMDGDEIMVFVFDMLQNPKQRCNPKII
DSLTAKLIELSGEEEVTLRGFSKLLPLEDSIMDQYKDITKLDRKATLRVL
AFYDQNDEGAIDGCELYALIKDVLESNGHKDPYNMEVILEKQEYLKEAGC
LTPSGALDYTKTDIVFALGTEKASEEVV
Run BLAST on NCBI

transcript from alignment at scaffold_251:608956..613856+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055186 ID=TCONS_00055186|Name=TCONS_00055186|organism=Clytia hemisphaerica|type=transcript|length=4901bp|location=Sequence derived from alignment at scaffold_251:608956..613856+ (Clytia hemisphaerica)
TTCCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGT
GACTTATTACACGCACTCAAAAGCTAGATGGGTTGACCTGGCTGATGTAT
GTCATTATCATATCACattttaatacaccttttcgacggtatccgccaat
tgccgcgcgggcatttctTTGTCCGTtctaccaccctaaaaccgtcccag
tcttttttacgcacctatagacaatagaaaaaggtgtaaaaaaggattgg
atcgagtttagggggataattgaATAGCAAAGTGGCACACGCCTGACcgt
gcgactacggtcgaaaagggtACACTTTACGCTAATTCTCAGAAGATAAT
TAATTAAATCTAATTTAAATTTAATACTTTAATGAGAAAAAACTTTGTCg
atatcaaattttttgaatttgcgGATTTTTGTGTTAATTCATCCGGTAAA
CAAAGGTCCtgatgaaaatctaaaaaaaaaaaaacgcgaaATAAATTTAA
ACGACATTTCAAatggcaatttttttattttcaacttaTGAAGTCTTAGG
ATTTTGCGAATAAGTATCAAGAGCGAAATTTTATCTCAGAGCCTTTTAAA
AAATCAACGTTGGAGTAATGTCGACTGTAAGGAAAAATGATTTACCTTAA
TTTACAGAAACAGAGATGATCCTTATTACCCTAgcacgcaacgttgtttc
aacgttaatccaATAGATGTTACGGACGTCAGAtggacgtcaaaacaacg
tagtgtgtcagctgggtaaaGATCTATCTAAAAATCTATATACATTCTTT
CTTAGATGTTTCGATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCTCG
GATGTTCGTGGTCGTCTCAAATACTCCTCTGTTGATGTGATGCAGGTATA
AAATTGTTACAACAGTTgaaactctctaattcgatcttcaaggcaccaaa
aattttattcgaattagagaaatattatatagagggtaatttaaaccact
ttccgAACCAcctagtttgagttagaaatcgtcatttttggtctaattcG
TAGGAGTTAGATTGGGCTTCATGggcaagcaaaaaaagtgaaattttcca
gcgagattttaaggccaaaaagtaaaaaaaaatgcaaatattTGAGAGTT
TGATCGTTGTTTGGCCATTTtcggtcaacgagtgatccaagaacctctaA
ATTTGGCCctattttactttattctgtcctcTAGCGAATTGGTTTGATGT
TTTACGACTGGCACCTTTCCGTCATTTAGTCAGGTTCCgcgctatccaac
gagctatggACGAGCTTCTAACACTTTCAAGATCCGGACATATaaacctt
taaaatttgaactagcgattttcttaaaaagcttAGAAGAAAAGGACCGT
GGCATTTAAAGGGTTAATATTtatgatttcattatttttgatgaTCATCA
GATTTGGACGTATTACAACGATGACCACACAGATACTATGGATGGAGACG
AAATTATGGtaacagtttttttataagaagattcaaaatttaagaacatt
tttataacTGTATAACATACAGTGCACGAACAAATTAAGAACTAGTTTGT
TggtacaccccttctcacagcctCACTGGGAACCCTTTCCCACGggaaaa
atttaccaaaatacaGTATCGTCCCCGGTAAAAattttactctaattttt
gtccccgctgaaaataatcagataagcaaatcttTACTGAAAATCATTGT
TCTactttttccatccccactgaattctATTGCtcaaaaaacaatggaat
tcaaatccccagccataataaaaaattgggaatatcaatccccattcaGT
TTTGGTCCGCTTTTTTTaaccactggctgaaaaaatcttaccaGGTCTAT
GAGATGGTGGTGTGCTGGTTCTTCATAATagaaaaattcatgattttccG
TATCCATCATTTCAGGTGTTTGTCTTTGACATGTTACAAAATCCGAAGCA
GCGATGTAACCCAAAGATTATTGACAGTTTGACTGCAAAACTTGTAAGTT
aagtaaaattataaaaaaattgagaacaaGTTTTTCTTCTAGACTGGGTT
TCCCATTTTTTGAGATAAGGAAAATTAATTTGAGGGAATTTATTAGTGAA
ACTTTGTGAACTTTGTGTTATTAGCGTGACagataaaaaatatgaaattc
ttAAGATAAGTTAGTAAAAGTTTCTTTGATCGAAAATTTATTAGTGAAGT
GGCTCTTAGGGGCACTTTTTCATTAGATATCCCACACATTCTGCAAATCC
CCTGGACGAGGACCCCAggcggttttcgtgatgacgtgatagagactttt
ttgtagcgtgattacgtgatttggagaTATTTTCTTTGTGATTGCGTGAT
GAAAGGCCAAAACGTGATTtgaactttttcaaagggatgcgtgatcATCC
AAATTTATTGCTGATTTTCTTGATCGTGATCGAagacaaaaattgcgtga
tatcgtgatcagagtaaTCGCTGGGAAGGAGTCCTCCTGATGACTAACAT
CAGCTTTGCTACTAGCATCTAGTATTTTGCGTGATacctaaagaaatatg
aaattttttagTATATGGTGGGATAAACACCTGGATTTCTTCAAAACTTT
AGCAGAGTTATTCAAATACAATTCCCGGAGAAAATATCGACATTTTTAAA
ATTCGCGGAGTACAAGAGTGTGAAAATCATATAATCTGTTCCAATAAAAA
ACTCAAAGTTTTAGACAATGTTGATTTAAAAGAATCGTTACGTTTTGTTT
CTTGAATATTTAGATTGAATTGTCTGGTGAAGAAGAAGTGACACTCAGAG
GATTTTCAAAGTAAGTCACTTATTCTTTAACAATACAgctctctaattca
attttcaaaggttattggattttcatcgaataagggagcgtatggAATAT
TAGAGCGtggtttatgagagtttcttgtcgATGGTGATTTTAAATaatat
cgaataatggagcgtgtCAAATAGaagaatgtcgaattagagagcatcaa
ctgtagaTCATTTCTGCATTCATTGAAGGTAAACGCGATCACAAAATGTT
TCCGTTTTTTGATAGATATTAATTTTCAATTTACTCGTGACTGTTATTTT
AAGCACTAATTTAATTTTCTATTACATTTTACTCTTATTGTTATCTTCTT
AAGCACGTAAGCACTGAGTTAATTATTTATTGTATAGGTTGTTACCACTT
GAAGACAGCATCATGGACCAATACAAAGACATCACAAAATTGGATCGAAA
AGCGACTTTGCGTGTATTAGCCTTCTATGATCAGGTGAGTTTACAATGCC
AATAAACTCGTATTAAGTCCCTTTGTCCCTTTTTTCACGGTTCTCGTGCC
CCTTAGTAGAATCAAAaacataggccatttcacagttgCAAAGCGTAATG
GATAATCAGGACCATTGTGCGCTAAttacgacttactattggtgcaaagt
tttgaaaatctttgaagatttttgcgtctagcctaCGGAAAACCGTTATC
AGGGTGCAATCAGTCTTGATTACCAATGGTCTATTTCGAATGTTCGATAA
AGCCGACTGCTAGGAGCGAAATTTCTCCGTAGTGTTAGTCTGACACTGGA
TAGGAAGTGAAATTTACAGTCCTACTTTGAAAAATGTATCACTTAGAAAT
CAAATATTTCTCAATACGTAGACAAGGGGGCGCACGGAATTTCGGTCTTA
TAAAGTCTTTATCCCCTTTTtccggaattcatacatgaaaaatcaaattt
gatgaaaaattagtcaaaacaaggaaaaatacCTAAGAAattggtatcgg
aattgcaattatttttttacggaatttcggaaatttcggcaaaattattc
ggtatttatTATTAATTTCGAAACTTTCTTTCACATGAAATTTTGTGTTT
GTATAAGGCTATATATTTCACttccttttttgattttgtcgtCCAACAGA
ATGATGAGGGAGCAATCGATGGCTGTGAATTATACGCCCTTATTAAAGAT
GTTCTTGAATCGAACGGTCACGTGAGTATAACACAATTATCTGAATAGAT
GAGGAATATAGAAATAGATATTATTAtatcaaaaaaaagttattttacaT
AAAAATGAATCCAACCAGTTTAACAAAACCTGACGAGTTGCTTTGATCTT
TTGAAACACAAAATCTAACACCCCAAGGTCAGCAAATAGCGCTTTTACAC
GTTGATCGTGAGTTAAATGACATTAGACATTACCATTTTGTTCAAGGGTT
TATAGGCACATCTCAACTTATCTCAACAATtccacttttttgaaaagtaa
atattttcgGTTGCACATCTTTAGACTCTATATTCATTAGCCGCCCACTT
TTAATTTCATGGCGTGGGTTCTGCAAAACTTGTTATTTTGCTTacagata
aacatttttttccctTTCTTATTAATAGAAAGATCCTTACAACATGGAAG
TGATTCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGCTTAACACCA
AGTGGTGCACTGGATTACACCAAAACTGACATTGTTTTCGCCCTGGGAAC
GGAGAAAGCCTCAGAAGAAGTCGTTTAATATGAACACATGCTATAAAATT
ATCGACCCTTACGCCACAATTGGGTTGAAGATCCGAATCACAAGTCAATA
AGATTTTTAACTTTACATAAATTATGAAAGTTTTGCTCCACTTTTTCAAG
AATATGATGTATATACAAACTCAAACTGTACtgtaaataaaacaattttg
aaatcttGGTTACCCATATTACTTGTACCATATTATCCTGTAAATaagca
aaatctaaaataaatcgATGTATAAACTTCAGTTATAATGAAATATAGCC
A

Coding sequence (CDS) from alignment at scaffold_251:608956..613856+

>TCONS_00055186 ID=TCONS_00055186|Name=TCONS_00055186|organism=Clytia hemisphaerica|type=CDS|length=5496bp|location=Sequence derived from alignment at scaffold_251:608956..613856+ (Clytia hemisphaerica)
TTCCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGT
GACTTATTACACGCACTCAAAAGCTAGATGGGTTGACCTGGCTGATATGT
TTCGATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCTCGGATGTTCGT
GGTCGTCTCAAATACTCCTCTGTTGATGTGATGCAGATTTGGACGTATTA
CAACGATGACCACACAGATACTATGGATGGAGACGAAATTATGGTGTTTG
TCTTTGACATGTTACAAAATCCGAAGCAGCGATGTAACCCAAAGATTATT
GACAGTTTGACTGCAAAACTTATTGAATTGTCTGGTGAAGAAGAAGTGAC
ACTCAGAGGATTTTCAAAGTTGTTACCACTTGAAGACAGCATCATGGACC
AATACAAAGACATCACAAAATTGGATCGAAAAGCGACTTTGCGTGTATTA
GCCTTCTATGATCAGAATGATGAGGGAGCAATCGATGGCTGTGAATTATA
CGCCCTTATTAAAGATGTTCTTGAATCGAACGGTCACAAAGATCCTTACA
ACATGGAAGTGATTCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGC
TTAACACCAAGTGGTGCACTGGATTACACCAAAACTGACATTGTTTTCGC
CCTGGGAACGGAGAAAGCCTCAGAAGAAGTCGTTTAATTCCAGGAAAACG
AAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGTGACTTATTACACG
CACTCAAAAGCTAGATGGGTTGACCTGGCTGATATGTTTCGATACTTGGA
GCCGTTCCTTCTTCCACACGCTTTCTCGGATGTTCGTGGTCGTCTCAAAT
ACTCCTCTGTTGATGTGATGCAGATTTGGACGTATTACAACGATGACCAC
ACAGATACTATGGATGGAGACGAAATTATGGTGTTTGTCTTTGACATGTT
ACAAAATCCGAAGCAGCGATGTAACCCAAAGATTATTGACAGTTTGACTG
CAAAACTTATTGAATTGTCTGGTGAAGAAGAAGTGACACTCAGAGGATTT
TCAAAGTTGTTACCACTTGAAGACAGCATCATGGACCAATACAAAGACAT
CACAAAATTGGATCGAAAAGCGACTTTGCGTGTATTAGCCTTCTATGATC
AGAATGATGAGGGAGCAATCGATGGCTGTGAATTATACGCCCTTATTAAA
GATGTTCTTGAATCGAACGGTCACAAAGATCCTTACAACATGGAAGTGAT
TCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGCTTAACACCAAGTG
GTGCACTGGATTACACCAAAACTGACATTGTTTTCGCCCTGGGAACGGAG
AAAGCCTCAGAAGAAGTCGTTTAATTCCAGGAAAACGAAGCTATTTATTT
GACGAAGTTTATCAAAACCTTTGTGACTTATTACACGCACTCAAAAGCTA
GATGGGTTGACCTGGCTGATATGTTTCGATACTTGGAGCCGTTCCTTCTT
CCACACGCTTTCTCGGATGTTCGTGGTCGTCTCAAATACTCCTCTGTTGA
TGTGATGCAGATTTGGACGTATTACAACGATGACCACACAGATACTATGG
ATGGAGACGAAATTATGGTGTTTGTCTTTGACATGTTACAAAATCCGAAG
CAGCGATGTAACCCAAAGATTATTGACAGTTTGACTGCAAAACTTATTGA
ATTGTCTGGTGAAGAAGAAGTGACACTCAGAGGATTTTCAAAGTTGTTAC
CACTTGAAGACAGCATCATGGACCAATACAAAGACATCACAAAATTGGAT
CGAAAAGCGACTTTGCGTGTATTAGCCTTCTATGATCAGAATGATGAGGG
AGCAATCGATGGCTGTGAATTATACGCCCTTATTAAAGATGTTCTTGAAT
CGAACGGTCACAAAGATCCTTACAACATGGAAGTGATTCTCGAAAAACAA
GAATATTTGAAAGAAGCAGGATGCTTAACACCAAGTGGTGCACTGGATTA
CACCAAAACTGACATTGTTTTCGCCCTGGGAACGGAGAAAGCCTCAGAAG
AAGTCGTTTAATTCCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATC
AAAACCTTTGTGACTTATTACACGCACTCAAAAGCTAGATGGGTTGACCT
GGCTGATATGTTTCGATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCT
CGGATGTTCGTGGTCGTCTCAAATACTCCTCTGTTGATGTGATGCAGATT
TGGACGTATTACAACGATGACCACACAGATACTATGGATGGAGACGAAAT
TATGGTGTTTGTCTTTGACATGTTACAAAATCCGAAGCAGCGATGTAACC
CAAAGATTATTGACAGTTTGACTGCAAAACTTATTGAATTGTCTGGTGAA
GAAGAAGTGACACTCAGAGGATTTTCAAAGTTGTTACCACTTGAAGACAG
CATCATGGACCAATACAAAGACATCACAAAATTGGATCGAAAAGCGACTT
TGCGTGTATTAGCCTTCTATGATCAGAATGATGAGGGAGCAATCGATGGC
TGTGAATTATACGCCCTTATTAAAGATGTTCTTGAATCGAACGGTCACAA
AGATCCTTACAACATGGAAGTGATTCTCGAAAAACAAGAATATTTGAAAG
AAGCAGGATGCTTAACACCAAGTGGTGCACTGGATTACACCAAAACTGAC
ATTGTTTTCGCCCTGGGAACGGAGAAAGCCTCAGAAGAAGTCGTTTAATT
CCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGTGA
CTTATTACACGCACTCAAAAGCTAGATGGGTTGACCTGGCTGATATGTTT
CGATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCTCGGATGTTCGTGG
TCGTCTCAAATACTCCTCTGTTGATGTGATGCAGATTTGGACGTATTACA
ACGATGACCACACAGATACTATGGATGGAGACGAAATTATGGTGTTTGTC
TTTGACATGTTACAAAATCCGAAGCAGCGATGTAACCCAAAGATTATTGA
CAGTTTGACTGCAAAACTTATTGAATTGTCTGGTGAAGAAGAAGTGACAC
TCAGAGGATTTTCAAAGTTGTTACCACTTGAAGACAGCATCATGGACCAA
TACAAAGACATCACAAAATTGGATCGAAAAGCGACTTTGCGTGTATTAGC
CTTCTATGATCAGAATGATGAGGGAGCAATCGATGGCTGTGAATTATACG
CCCTTATTAAAGATGTTCTTGAATCGAACGGTCACAAAGATCCTTACAAC
ATGGAAGTGATTCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGCTT
AACACCAAGTGGTGCACTGGATTACACCAAAACTGACATTGTTTTCGCCC
TGGGAACGGAGAAAGCCTCAGAAGAAGTCGTTTAATTCCAGGAAAACGAA
GCTATTTATTTGACGAAGTTTATCAAAACCTTTGTGACTTATTACACGCA
CTCAAAAGCTAGATGGGTTGACCTGGCTGATATGTTTCGATACTTGGAGC
CGTTCCTTCTTCCACACGCTTTCTCGGATGTTCGTGGTCGTCTCAAATAC
TCCTCTGTTGATGTGATGCAGATTTGGACGTATTACAACGATGACCACAC
AGATACTATGGATGGAGACGAAATTATGGTGTTTGTCTTTGACATGTTAC
AAAATCCGAAGCAGCGATGTAACCCAAAGATTATTGACAGTTTGACTGCA
AAACTTATTGAATTGTCTGGTGAAGAAGAAGTGACACTCAGAGGATTTTC
AAAGTTGTTACCACTTGAAGACAGCATCATGGACCAATACAAAGACATCA
CAAAATTGGATCGAAAAGCGACTTTGCGTGTATTAGCCTTCTATGATCAG
AATGATGAGGGAGCAATCGATGGCTGTGAATTATACGCCCTTATTAAAGA
TGTTCTTGAATCGAACGGTCACAAAGATCCTTACAACATGGAAGTGATTC
TCGAAAAACAAGAATATTTGAAAGAAGCAGGATGCTTAACACCAAGTGGT
GCACTGGATTACACCAAAACTGACATTGTTTTCGCCCTGGGAACGGAGAA
AGCCTCAGAAGAAGTCGTTTAATTCCAGGAAAACGAAGCTATTTATTTGA
CGAAGTTTATCAAAACCTTTGTGACTTATTACACGCACTCAAAAGCTAGA
TGGGTTGACCTGGCTGATATGTTTCGATACTTGGAGCCGTTCCTTCTTCC
ACACGCTTTCTCGGATGTTCGTGGTCGTCTCAAATACTCCTCTGTTGATG
TGATGCAGATTTGGACGTATTACAACGATGACCACACAGATACTATGGAT
GGAGACGAAATTATGGTGTTTGTCTTTGACATGTTACAAAATCCGAAGCA
GCGATGTAACCCAAAGATTATTGACAGTTTGACTGCAAAACTTATTGAAT
TGTCTGGTGAAGAAGAAGTGACACTCAGAGGATTTTCAAAGTTGTTACCA
CTTGAAGACAGCATCATGGACCAATACAAAGACATCACAAAATTGGATCG
AAAAGCGACTTTGCGTGTATTAGCCTTCTATGATCAGAATGATGAGGGAG
CAATCGATGGCTGTGAATTATACGCCCTTATTAAAGATGTTCTTGAATCG
AACGGTCACAAAGATCCTTACAACATGGAAGTGATTCTCGAAAAACAAGA
ATATTTGAAAGAAGCAGGATGCTTAACACCAAGTGGTGCACTGGATTACA
CCAAAACTGACATTGTTTTCGCCCTGGGAACGGAGAAAGCCTCAGAAGAA
GTCGTTTAATTCCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAA
AACCTTTGTGACTTATTACACGCACTCAAAAGCTAGATGGGTTGACCTGG
CTGATATGTTTCGATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCTCG
GATGTTCGTGGTCGTCTCAAATACTCCTCTGTTGATGTGATGCAGATTTG
GACGTATTACAACGATGACCACACAGATACTATGGATGGAGACGAAATTA
TGGTGTTTGTCTTTGACATGTTACAAAATCCGAAGCAGCGATGTAACCCA
AAGATTATTGACAGTTTGACTGCAAAACTTATTGAATTGTCTGGTGAAGA
AGAAGTGACACTCAGAGGATTTTCAAAGTTGTTACCACTTGAAGACAGCA
TCATGGACCAATACAAAGACATCACAAAATTGGATCGAAAAGCGACTTTG
CGTGTATTAGCCTTCTATGATCAGAATGATGAGGGAGCAATCGATGGCTG
TGAATTATACGCCCTTATTAAAGATGTTCTTGAATCGAACGGTCACAAAG
ATCCTTACAACATGGAAGTGATTCTCGAAAAACAAGAATATTTGAAAGAA
GCAGGATGCTTAACACCAAGTGGTGCACTGGATTACACCAAAACTGACAT
TGTTTTCGCCCTGGGAACGGAGAAAGCCTCAGAAGAAGTCGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034759XLOC_034759Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055186-exon-scaffold_251-1491911889:608956..609051TCONS_00055186-exon-scaffold_251-1491911889:608956..609051Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:608956..609051TCONS_00055186-exon-scaffold_251-1510915933:608956..609051Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:608956..609051TCONS_00055186-exon-scaffold_251-1575043694:608956..609051Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1491911889:609761..609850TCONS_00055186-exon-scaffold_251-1491911889:609761..609850Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:609761..609850TCONS_00055186-exon-scaffold_251-1510915933:609761..609850Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:609761..609850TCONS_00055186-exon-scaffold_251-1575043694:609761..609850Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1491911889:610407..610463TCONS_00055186-exon-scaffold_251-1491911889:610407..610463Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:610407..610463TCONS_00055186-exon-scaffold_251-1510915933:610407..610463Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:610407..610463TCONS_00055186-exon-scaffold_251-1575043694:610407..610463Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1491911889:610921..610998TCONS_00055186-exon-scaffold_251-1491911889:610921..610998Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:610921..610998TCONS_00055186-exon-scaffold_251-1510915933:610921..610998Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:610921..610998TCONS_00055186-exon-scaffold_251-1575043694:610921..610998Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1491911889:611769..611815TCONS_00055186-exon-scaffold_251-1491911889:611769..611815Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:611769..611815TCONS_00055186-exon-scaffold_251-1510915933:611769..611815Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:611769..611815TCONS_00055186-exon-scaffold_251-1575043694:611769..611815Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1491911889:612193..612289TCONS_00055186-exon-scaffold_251-1491911889:612193..612289Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:612193..612289TCONS_00055186-exon-scaffold_251-1510915933:612193..612289Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:612193..612289TCONS_00055186-exon-scaffold_251-1575043694:612193..612289Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1491911889:612955..613026TCONS_00055186-exon-scaffold_251-1491911889:612955..613026Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:612955..613026TCONS_00055186-exon-scaffold_251-1510915933:612955..613026Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:612955..613026TCONS_00055186-exon-scaffold_251-1575043694:612955..613026Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1491911889:613434..613856TCONS_00055186-exon-scaffold_251-1491911889:613434..613856Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1510915933:613434..613856TCONS_00055186-exon-scaffold_251-1510915933:613434..613856Clytia hemisphaericaexon
TCONS_00055186-exon-scaffold_251-1575043694:613434..613856TCONS_00055186-exon-scaffold_251-1575043694:613434..613856Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055186-proteinTCONS_00055186-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:608956..613856 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0472407	0.0460671	0	0.05233	0.254827	0.352393	0	0.0568597	0.756367	0.542406	0.8615	0.912399	26.5485	24.6017	9.46916	7.05285	2.73068	4.07107	43.9406	41.6717	12.2409	11.5626	5.1457	9.0609	8.47028	14.44	1.81374	0.414786	0.1573	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055186 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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