TCONS_00055012 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055012
Unique NameTCONS_00055012
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3012

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055012 ID=TCONS_00055012|Name=TCONS_00055012|organism=Clytia hemisphaerica|type=transcript|length=3012bp
ATAACAATTTGCGCTCTGTTTCCGTTTTTCTTATTGTATTTCTCACTTAT
ATCTTTAGGTGCgtaattatgaaaaatagatgaataaaaataaatagaCA
GATATGACCGTTCCAACCTGATTTATCCTGAGGTATCTGGAAAGTATTAG
CAAGGACATTATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATT
CAGCTTTTGAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTT
GCTGCATTTTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGG
ATTCACAGCAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTG
CTATTGATTTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATG
TGTGATcctgattttgatatttttgcgTCAGTTGTGGCACTAGGCGCTCT
AGTTGGTGGTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGGAAAA
CTACCATTATCTCAACAactattttctactttcttgGATGGGTTCTCATT
GCAAACAGTTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATCCAGA
ATTTTGTCGAAAACACTCAAAACAATGGTATTATAGCATGCTGTATTGTG
GACGTGTTATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGTGCCT
GTGTACATTGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAA
CATCAATCAGTTGTCAATCAATTTTGGATTTGTTGTAGCCTACATGACAG
GATACAAACAAAATCTTCCCACAACAGCTTACGTACCAATCGGAATCTCA
ATTCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGCGATA
TCTTTTGGCAAACAACAGACGACATGATGCCATCCTCGCATTGTATTGGT
TAAGAGGTCCAGACTATCCAGTGGAAGaggaatgttttgaaattgaaggC
CATGTTAATTTTGGAACTCAAGAGCAATGGCAATGGAAGGATCTGAAAAG
TTCCACATTCTACTGGCCGCTCATCATTgcactttttttgatgtttttcc
aAGAATTCAGTGGTATAAATTGTATCTTATTTTACTGCacctcaattttt
tttgcttctgGGATTGGTGCTCAATTGAAACCTGGAGATACCCATATATT
GGATACTTTGACAAAAGGCTCAGAAGAATATGCAATATATGTGTGTTTCA
CACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTTTGGA
CGCCGAAAACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAAT
TCTAGTAAGTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTG
ATGACATTTCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATT
TTAGCTTTTGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATG
GGGCCCGTTGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAA
GAGGTATTGCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTT
ACAACGACTTCATCTTTCTGTTTTCTCGTGAATAAAATNNNNNNNNNNNN
NNGCTCAATTGAAACCTGGAGATACACATATATTGGATACTTTGACGAAA
GGCTCAGAAGAATATGCAATATATGTGTGTTTCACACTGTTCATTTTCAC
CGGAATTTCCTGCTTTTTAGTGGACCGGTTTGGACGCCGAAAACTCCTCT
TATCCGGTAGTGTTGGAATGTTTATCTCACTAATTCTAGTAAGTGTGTAC
GTCCACTCTTATCCTGTTTATTATAATAATGTTGATGACATTTCTAATTT
CTTTTCGAAACAAGAAAACACAACATATGCCATTTTAGCTTTTGTGTGTA
TACTCTGTTTTATTGCAATGTTCTCAATCGGATGGGGCCCGTTGCCATGG
TTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTATTGCAACTAC
AATTGTCACTTTATCAAACTGGTTATTTGTGTTTACAACGACTTCATCTT
TCTGTTTTCTCGTGAATAAAATTCATATTTATGGTGCCATGTGGATCTTT
GCAACAATTGTATTTATTGGTTTCTTCTTTACCCTGTTTTTTGTACCGGA
AACCCGGGGTCGCCCACTTGAAGAAGTAGCAGAACTTTTTATTAGACGGA
AGGTGTTGCAGGTCAGCATTCTGTGGACCAGACATGATGCGTCAATGTAA
TCACCTATCAATTTGTTGGCAATGACTGACTGATCACCACATTAATAAAT
TGGAAAACAATTTccatttttaatgatttttaattttttttgcacaacAC
ACCTCTTATGCTGAAAGTtacacccccttttcacagacccggtaggattt
tttcagccagtgggaataaaataacggactgaaactttatggggattgat
atttccatatttttcatggctgggtatttcaattcttttgttttcaagtc
agaaaattcagtgagcatggaaaatagcataataatttgcagtgaggatt
ggtttatctGATTACTTTCAGTGTGGACAAAAATGGGCGGCTAATTTTCC
ATCGGAGACGGTATTTTGGCTAGTTTTTCTAGTGGGAAGGGGTCTCAatg
agtctgtgagaagggggtgtaaagttgttctttcttttcttttgtgaaAT
GATGTTCTTgatgttgttgttgaaattagtgttttgttttgattatttaa
aTACATTTGATAGTTgacaattattttttcaatcatttttaaaataatct
taATTTATGTATTATGACCTTAGAATCTAAATTAAACCAATGAATACAAG
AGTAAATcacttttattttcagtttttgtatttGCAATGTATCTTTGAAT
GATTTGTGATGTTACAATGTTACAATTTCTATATAGGTTGCTATATATCT
TTTTTACATATT
Run BLAST on NCBI

transcript from alignment at scaffold_248:329907..339433+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055012 ID=TCONS_00055012|Name=TCONS_00055012|organism=Clytia hemisphaerica|type=transcript|length=9527bp|location=Sequence derived from alignment at scaffold_248:329907..339433+ (Clytia hemisphaerica)
ATAACAATTTGCGCTCTGTTTCCGTTTTTCTTATTGTATTTCTCACTTAT
ATCTTTAGGTGCgtaattatgaaaaatagatgaataaaaataaatagaCA
GATATGACCGTTCCAACCTGATTTATCCTGAGGTATCTGGAAAGTATTAG
CAAGGACATTATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATT
CAGCTTTTGAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTT
GCTGCATTTTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGG
ATTCACAGCAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTG
CTATTGATTTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATG
TGTGATcctgattttgatatttttgcgGTAAGTCATAACGTTCAGAGAGG
TTTCTATCCCTCTCTTAAAATGTACTCTCCCTAATTCTGAGAAGGAATAA
GTAAGTTTACACAAGAGTAGGATGAGCTAGATTCGAACGTTCTAGAGGAT
ACTGATTTCACCTCTGTTTTTGAGGTCTTGTAAATTACTAGGAATTGCAA
ATAATGTTTCTAATATCCTTTTTATTTCAAGTCAGTTGTGGCACTAGGCG
CTCTAGTTGGTGGTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGG
AAAACTACCATTATCTCAACAactattttctactttcttgGATGGGTTCT
CATTGCAAACAGTTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATC
CAGAATTTTGTCGAAAACACTCAAAACAATGGTATTATAGCATGCTGTAT
TGTGGACGTGTTATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGT
GCCTGTATGAGTCTTATTTTAATTAGTTATTTCATTATTCTTGGCTAATA
TTGAAAAATGATTGTTCTGATATAAGAAGGATCATAATTATTGTAAAATT
GAAGaaacaaaatatgaaaagaCCCTCATTAATACTTATCAATGGACTGA
ATAGGTTCTTACATTTTATTAACCATTCGTTTTACGTTACATGTTCAGGT
GTACATTGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAACA
TCAATCAGTTGTCAATCAATTTTGGATTTGTTGTAGCCTACATGACAGGA
TACAAACAAAATCTTCCCACAACAGGTTTAAATTTTAATATACCATATTT
CCTCTTTTTAACACCACCTTCTAAAAAGTAAGGCACTTAAGAGTGCATTC
AGCGAGTTTAAGtaatttataaatttggtaaACTGATTTTTGTGAACAAG
CTGTTATCTGTTGAATATTTTAGCCAGAAAAAGCTGAGAATGAAACACAA
GAGGgaatttttgagcaaaatatttgGGACTGCTGGTACTTTTAttgttt
gatttttaaccctaaGCTTTTTGAATAGGTCTAACTAAGGAAATAATTTA
AATTAatgaataataatttttttacaaattatctTCATTTTTTGCAGCTT
ACGTACCAATCGGAANCAGCATAATTTTCATTCTTACAATTTATTTTAAC
TGAACCAGATTCCAAATTATATTCACAACAGCTTACGTACCAATCGGAAT
CTCAATTCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGC
GATATCTTTTGGCAAACAACAGACGACATGATGCCATCCTCGCATTGTAT
TGGTTAAGAGGTCCAGACTATCCAGTGGAAGaggaatgttttgaaattga
aggCCATGTTAATTTTGGTATGTGTTACTTCTACTAAAAAAAGGGTAGGA
GGTTTATCTTTTGACAAAATGTATAGCTCATTCATTTTGCATGAAAATAA
CACTGCTAGCTGATGCAATTTAATGACTTTGAGGTTTTTGGAGGTTAGTT
ATTTTCAGTTCCTACTTCATATTTCATCCACTATCCTTTCTTTCTTATTA
GGCACCCAAGATCAATGGCAATGGAAGGATCTGAAAAGTTCCACATTCTA
CTGGCCGCTTTTCATTGCacttagtttaatgttttttcaAGAATTCAGTG
GTATAAATTGTATCTTATTTTACTGTTCTTCCATCTTTCTTGCATCTGGG
ATAGGTGCACGAGTAAAACCTGAAGATCTAGTTAACTCTAAGAAGATACT
GGAAGCTTTAAAGAATGACTCCAAATTGTATGCCTTGTTTGTCTGCTCAa
cacttttcatttttactgGAATATCTTGCTTCCTAGTGGACCGATATGGA
CGCCGGAAACTCCTCCTATCCGGTAGTGTGGGAATGTTTATCTCACTGAT
ACCAGTCAGTGTGTATGTTTATCACTACCAATTCAACATGAAGCAAATAA
TTGATTTCTtatcaaaacaagaaaacacaACATATGCCATTTTAGCTTTG
GTGTGTATACTCAGTTTTATTGCAATGTTCTCAATTGGATGGGGTCCGCT
GCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTATTG
CAACTGCCATTGTCACTTTCTCAAACTGGTTATTTGTGTTTACAACGACT
TCATCTTTCTGTAAAGTCATTTATGGAATCCATATTTATGGTACACTATG
GACTTTTGCAATCATTGTAGTTATGGGTTTCTTTTTCACGCTGTTTTTTG
TCCCTGAAACTCAAGGTCGACCACTGGAAGAAGTAGCAGAACTTTTTATA
AGACGGAATTTGCTGCAGGTCAGCATTCCATGGACCAGACACGATGCAtt
ataatcaatttttttttaagttgctTGAAGTTGCAGACAAATCCTtacaa
taattcaaaaatttgatacAGGATACACTGCTTCAACTTTACCGTCCTAT
CtaaaagacaaaatattttttaacaaagattTTCGTACTGAAAACATGCC
TTAAGGGAAGAAGATTTGTAAACTCTAGTCAAAATTGAAAGATTCTTTCA
AGACGAACAAAAGAAGATTGCCCAAAAATTCTTTGATTTGAATaagaaat
ctaaatttttgaattaatatttttcaaagatgtTTTTGTAAATCATATAT
TTTGTGTTCTTTTGAAGATTACTTGTttattttaatatctttttataaga
ttctttttttattgaaattttgtaacattttacattaaatttgaattatt
atAGTATAGTCCTGACAAAGGTAATGGTTTATTTAAAAGAACAACAATGA
AATCAAGACCTGGTTGAAAATTAAGTATCCCCCCTTATTTGACAAACAAA
GAAGTCTTTTTAGAGTAAAGATTAACACTAAGATTAACAATTtacctttc
aaaaaaaattaatatttttgggGGATTATTTTCCTGGTAGGCTCTTAACA
CACCTgccttttaaaatttcatttttctaacgTTTTTCTActctttttac
atttttccaGATAAACCAATACAAatacgaaaattaaaaaagactgACAA
GATGCTCCCAATAATATGACTTCTTCCATCAGTATTTAGACATTGGGAAC
TGGCACTAAGAGGTCAACCTTAAAGAAAAGTTATTACAATAATGGCATCA
GCTCGCGGTGATATTTTCATACAAAATGATTCAGCTTTTGAGGGTAAAAA
CAACAAGGACAAAATGTGGACAGCATGTTTTGCTGCATTTTCTGCTGCCC
TGGCTACTGTAAATTTTGGATATGCTCTTGGATTCACAGCAGAAGCAGAA
TTATTGCTACAGTTTAATCcaaattttaatgtaaattcaACAAAAAGATT
TGCAGGGTGTACTGAagatttcgatttctttgcaGTAAGTAACATTGCAT
TAACAACAGCAGGTAGTTGGTCCATTTTTTCTTCGATTAAAAATAACAAC
CTCTTCAATGCAAGTttagttttttggacctaccccggtggggtggaggt
cctataaattaacctgtgtttgtttgtccgttcgttcgtctgttaccaac
ttttctcaggattgaatcataggaatcttttgatttttggtacaaaggtg
caaaatggtggtgggcaAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGAACCGACACAAACCTGTGAAAACCATTCTCTAAACTATTATTTG
AGTATGGTGTACACTGGACGAGTGATAACTGGCGTTGGAGCTGGGATGAG
CTCCTTAGTTGTGCCTGTAGGTTTTCTCTTACAATAACACAAATAGCTCT
ATATCTGATAAGAAGTAGGCCCAGAACCGTCCGTTAGGGTTACCAAGATT
TAAGATTATTTAGTAtttgttgacccccccccctcctcaattaatatttt
tttaattaaaccTTACTTCGTTATGATATGTACTTCAATATGTATCTGAT
TATGTACACAAGCATGAATACCAATCCTTGCCAATCAGATCACTTTTGAT
ATTTGACAGTATTtccttttgacttttttcaaactccaaATTAAACCACT
TCGTTGAATCAAGGTTGATAGGTGTATGAGATTTAGTcacttttaatatt
tttatccccataaTTGATCTCCAaagttttctttattaaaatatcacaaa
agattttttctttactCCATGTTCAGGTGTACATTGCGGAAATTGCATCA
GCGCGCATGCGTGGAGCACTTGGAAACATCAATCAGTTGTCAATCAATTT
TGGATTTGTTGTAGCCTATTTGACAGGATACAAACAAAATCTTCCAACAA
CAGGTTTTGTACTATTGCCATCATATTATCAATAACATATTATATAGGGA
AGTCAAGATCTTATATATTTACAGCTGAGGTCTAGTTATGCCTGTTGAAT
TATGTCTACCAAACATAATACTCAGTTCAAACTGGAGGTCAAGGAAATGT
AACTTTTGCATACTTTACCTTTCAGCATAATTTTCATTCTTACAATTTAT
TTTAACTGAACCAGATTCCAAATTATATTCACAACAGCTTACGTACCAAT
CGGAATCTCAATTCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGA
CACCGCGATATCTTTTGGCAAACAACAGACGACATGATGCCATCCTTGCG
TTGTATTGGCTAAGAGGTCAAGACTATCCAGTGGAAGaggaatgttttga
aattgaaggCCATgttaattttggtattttttcacttttgcttttatTAT
TCACTTTATTAACCACTCAACTTGAAGAaaggattttgtttttttcctca
AAGAGTTCTTTGATATCAACTTTTCTCCAATTTTAGGCTAAGGGTTTTTT
CTTAGACTACaatcccttctcacagacccagtgagatttttttcagccat
ttgGGCTAAAAACAACGAACCAAAAATTGATGGGATtgattttcctattt
ttctaatggctggggatttgaattcgaTTGTTTGCGAGCCAGAGatctca
gtggggatagaaaaagtagcataatattttgtacTAAGGATTTGCTtaac
actcttttttttataagcaaacgGGAAATTCAGGTCAAGGCTCAAcatgc
ttagcaaaatctcattttcagccttaatttatgcttatttatcTGCTTAG
ACttcgattttttgattttctttgggtttaagaaaattttgtatttttaa
gtgGGAATTGATTCAGCTCAAAGAATGAAAGTTTTATCTAAAATTTGACA
CTGCAGGTGAAAATCTTTGGTCCAAGAAAGCTCAAGCAGCTTTAAAAGCa
accctaaaaaggtcagcgCTTTAGAAAAACTGCactaatttttgcatttc
agcttggaggtatgcttGGAATTATGCTTATTTTCAACGGGGACAAAANC
TCAAGCAGCTTTAAAAGCaaccctaaaaaggtcagcgCTTTAGAAAAACT
GCactaatttttgcatttcagattagagtataattttccactggggacga
tattttggccaatttttcaggTGGGAAGgtgtcccagtgggtctgtgaga
aaggggtgtttagACTTTGGTAAAACATTTAGTACTTTTAGAGTGGTTAA
CCTTAAcattaaatgaatattttttcagGAACTCAAGAGCAATGGCAATG
GAAGGATCTGAAAAGTTCCACATTCTACTGGCCGCTCATCATTgcacttt
ttttgatgtttttccaAGAATTCAGTGGTATAAATTGTATCTTATTTTAC
TGCacctcaattttttttgcttctgGGATTGGTGCTCAATTGAAACCTGG
AGATACCCATATATTGGATACTTTGACAAAAGGCTCAGAAGAATATGCAA
TATATGTGTGTTTCACACTGTTCATTTTCACCGGAATTTCCTGCTTTTTA
GTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCGGTAGTGTTGGAAT
GTTTATCTCACTAATTCTAGTAAGTGTGTACGTCCACTCTTATCCTGTTT
ATTATAATAATGTTGATGACATTTCTAATTTCTTTTCGAAACAAGAAAAC
ACAACATATGCCATTTTAGCTTTTGTGTGTATACTCTGTTTTATTGCAAT
GTTCTCAATCGGATGGGGCCCGTTGCCATGGTTACTCATGTCTGAATTAT
TCCCAATCAAGACAAGAGGTATTGCAACTACAATTGTCACTTTATCAAAC
TGGTTATTTGTGTTTACAACGACTTCATCTTTCTGTTTTCTCGTGAATAA
AATNNNNNNNNNNNNNNGCTCAATTGAAACCTGGAGATACACATATATTG
GATACTTTGACGAAAGGCTCAGAAGAATATGCAATATATGTGTGTTTCAC
ACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTTTGGAC
GCCGAAAACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAATT
CTAGTAAGTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTGA
TGACATTTCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATTT
TAGCTTTTGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATGG
GGCCCGTTGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAG
AGGTATTGCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTTA
CAACGACTTCATCTTTCTGTTTTCTCGTGAATAAAATTCATATTTATGGT
GCCATGTGGATCTTTGCAACAATTGTATTTATTGGTTTCTTCTTTACCCT
GTTTTTTGTACCGGAAACCCGGGGTCGCCCACTTGAAGAAGTAGCAGAAC
TTTTTATTAGACGGAAGGTGTTGCAGGTCAGCATTCTGTGGACCAGACAT
GATGCGTCAATGTAATCACCTATCAATTTGTTGGCAATGACTGACTGATC
ACCACATTAATAAATTGGAAAACAATTTccatttttaatgatttttaatt
ttttttgcacaacACACCTCTTATGCTGAAAGTtacacccccttttcaca
gacccggtaggattttttcagccagtgggaataaaataacggactgaaac
tttatggggattgatatttccatatttttcatggctgggtatttcaattc
ttttgttttcaagtcagaaaattcagtgagcatggaaaatagcataataa
tttgcagtgaggattggtttatctGATTACTTTCAGTGTGGACAAAAATG
GGCGGCTAATTTTCCATCGGAGACGGTATTTTGGCTAGTTTTTCTAGTGG
GAAGGGGTCTCAatgagtctgtgagaagggggtgtaaagttgttctttct
tttcttttgtgaaATGATGTTCTTgatgttgttgttgaaattagtgtttt
gttttgattatttaaaTACATTTGATAGTTgacaattattttttcaatca
tttttaaaataatcttaATTTATGTATTATGACCTTAGAATCTAAATTAA
ACCAATGAATACAAGAGTAAATcacttttattttcagtttttgtatttGC
AATGTATCTTTGAATGATTTGTGATGTTACAATGTTACAATTTCTATATA
GGTTGCTATATATCTTTTTTACATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034657XLOC_034657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055012-exon-scaffold_248-1491911889:329907..330333TCONS_00055012-exon-scaffold_248-1491911889:329907..330333Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1510915933:329907..330333TCONS_00055012-exon-scaffold_248-1510915933:329907..330333Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1575043694:329907..330333TCONS_00055012-exon-scaffold_248-1575043694:329907..330333Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1491911889:330538..330810TCONS_00055012-exon-scaffold_248-1491911889:330538..330810Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1510915933:330538..330810TCONS_00055012-exon-scaffold_248-1510915933:330538..330810Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1575043694:330538..330810TCONS_00055012-exon-scaffold_248-1575043694:330538..330810Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1491911889:331005..331131TCONS_00055012-exon-scaffold_248-1491911889:331005..331131Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1510915933:331005..331131TCONS_00055012-exon-scaffold_248-1510915933:331005..331131Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1575043694:331005..331131TCONS_00055012-exon-scaffold_248-1575043694:331005..331131Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1491911889:331538..331723TCONS_00055012-exon-scaffold_248-1491911889:331538..331723Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1510915933:331538..331723TCONS_00055012-exon-scaffold_248-1510915933:331538..331723Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1575043694:331538..331723TCONS_00055012-exon-scaffold_248-1575043694:331538..331723Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1491911889:337435..339433TCONS_00055012-exon-scaffold_248-1491911889:337435..339433Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1510915933:337435..339433TCONS_00055012-exon-scaffold_248-1510915933:337435..339433Clytia hemisphaericaexon
TCONS_00055012-exon-scaffold_248-1575043694:337435..339433TCONS_00055012-exon-scaffold_248-1575043694:337435..339433Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_248supercontigscaffold_248:329907..339433 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.125138	0	0	2.42622	1.60796	2.29999	2.29962	0.891361	1.31706	1.46301	0.971959	1.18755	0.943219	1.86928	1.29744	1.76702	1.88848	1.37974	0.779556	0.806294	1.29683e-09	0.000534864	0.50197	2.16832	2.87184	0	0.238034	0.313878	0.24844
Blast
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BLAST of TCONS_00055012 vs. Swiss-Prot (Human)
Match: GTR8 (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 3.221e-43
Identity = 144/460 (31.30%), Postives = 228/460 (49.57%), Query Frame = 2 
Query:  278 VNFGYALGFTAEAELSEQFNSNNSAIDLSMLNGNSSKGFSMCDPDFDIFASXXXXXXXXXXXXXXILIDKIGRKTTIISTTIFYFLGWVLIANSYCYYGKHGGIGDPEFCRKHSKQWYYSMLYCGRVITGIGVGMSSLVVPVYIAEIASARMRGALGNINQLSINFGFVVAYMTGYKQN---LPTTAYVPIGISILNLILMVFFLPETPRYLLANNRRHDAILALYWLRGPDYPVEEECFEIEGHVNFGTQEQWQWKDLKSSTFYWPLIIALFLMFFQEFSGINCILFYCTSIFFASGIGAQLKPGDTHILDTLTKGSEEYAIYVCFTLFIFTGISCFLVDRFGRRKLL-LSGSVGMF-ISLILXXXXXXXXXXXXXXXDDISNFFSKQENTTYAILAFVCI--LC-FIAMFSIGWGPLPWLLMSELFPIKTRGIATTIVTLSNWLFVFTTTSSFCFLVN 1633
            ++FG+ALG+++ A  S Q  +  +                + D     F +VV LGA  GG+L G L+D+ GRK +++  ++ +  G+ +I  +   +                      ML  GR++TG+  G++SLV PVYI+EIA   +RG LG+  QL +  G ++AY+ G+      L     VP  +    ++L++ F+PETPR+LL  +RR +A+ AL +L G +   E+           G ++ +    L+    Y P II + LM FQ+ SG+N ++FY  +IF                 +   K S   ++ V     +FT ++  ++DR GRR LL LSG V +F  S       +       ++   IS   S Q       LA++ +  +C FIA F++GWGP+PWLLMSE+FP+  +G+AT I  L+NWL  F  T  F  L+ 
Sbjct:   38 LSFGFALGYSSPAIPSLQRAAPPAP--------------RLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVW----------------------MLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWVLEWRWLAVLGCVPPSL----MLLLMCFMPETPRFLLTQHRRQEAMAALRFLWGSEQGWEDP--------PIGAEQSFHLALLRQPGIYKPFIIGVSLMAFQQLSGVNAVMFYAETIF----------------EEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLME 433

HSP 2 Score: 99.7525 bits (247), Expect = 8.859e-22
Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 3 
Query: 1698 KGSEEYAIYVCFTLFIFTGISCFLVDRFGRRKLL-LSGSVGMF-ISLILXXXXXXXXXXXXXXXDDISNFFSKQENTTYAILAFVCI--LC-FIAMFSIGWGPLPWLLMSELFPIKTRGIATTIVTLSNWLFVFTTTSSFCFLVNKIHIYGAMWIFAXXXXXXXXXXXXXXPETRGRPLEEVAELFIRR 2249
            K S   ++ V     +FT ++  ++DR GRR LL LSG V +F  S       +       ++   IS   S Q       LA++ +  +C FIA F++GWGP+PWLLMSE+FP+  +G+AT I  L+NWL  F  T  F  L+  +  YGA W+ +        FTLF VPET+G+ LE++   F  R
Sbjct:  289 KDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHFEGR 477
The following BLAST results are available for this feature:
BLAST of TCONS_00055012 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTR83.221e-4331.30Solute carrier family 2, facilitated glucose trans... [more]
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