TCONS_00054709 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054709
Unique NameTCONS_00054709
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1785

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054709 ID=TCONS_00054709|Name=TCONS_00054709|organism=Clytia hemisphaerica|type=transcript|length=1785bp
ACAATCAAAAGTCCTAAGGACTGGAGGAACGTGAACTTTCAACATGGATt
acattttttgacatttgtttctttttttctttagcGTGTGTTTTGTGTGT
CTTGAAATGTACGACTTTGTTTACCCTGTTTTAAAGGAATTATGAAGACA
AGTGtctgaaaagaattactttctaaTGAAGGGAACCTCCCCCATACTTC
CAAACATCCTCTATTATGTTGAAATTCCTTAACTTAAAGTCCTTTATAAC
CAGTTGATTTATAATTTGGAGAAAGTCCATATCTTAGTGGATGAAATGAT
ATGGAATGGACATATCATTGAGACTTGCGCCAAAAAGATACTTGCACCAC
TCTCGTACATGGAAAAAGTCAACCAAAATTGATGCTTCTATATTCTTTGT
TTATGTATATTTCTTCATGTAAATGGAAGTAATAAGTCAATGATGATGGA
CGTTTGAGAGTAACTTGACATTTCGAATGAGAAAAAGATAATTGCATAAC
GGACAAGATAATCACCCCCTGTAAATAGcaacaattaaaaaattgaaatg
atattTAAATGTTGGTGCACTTGTTGATTGAATCAGTTTATCAATCGAAT
GTCATCAAGATGGTTTACGAACAAGTGCAAAATTTTCATCAAGAGAAAAA
TGATCGTATTACTCGTTGGTTGAATGAAAACACTGTGGATAAGGAAGACT
TATGCCTACCTtatttttatattgagaatGTTGAACGTACTTTGCCCATC
CTCAGTATgcagaaaatgacgtcatcacgaACATCCAGAAGTACGGTATC
CGATTTTTCATCTTCAGATGAAGAAAGTTTATATGATGAGTACGAAGATA
ATGATTCTGTTTTTGGCTCCATTATTAATGAAGACCAGTTTAATCTCAAT
ATATCGGAGACGAATAAGCGAGGCAAATTAACCAGCGATGTAGTAATTTC
AAAGACGATTCAAGGCTTTGAGGTACTGAAGGTCAAATGGAATACCTTAA
ATAATGACTTGTTATTAAAAGTTGAGAATAAATTATTTCCAGTCCATAAA
AACTTGTTGACGGCCCAGAGCTCATTCTTGAATGATCGATTGAAAAATAA
CGATGACTTGATTCTCGAGATTCCAGGTACAATTGCCGAAGTGACAGTTG
TATTGGAAATTATTTACGAGTGTAAATGGTCCCTTAACGAGAACAATGTA
AATGGAGTCTTAAAGATTTGcaaatatttgaaattaaaagCCATTGTGGG
CGACTGCGAGCAgtataagaaatttcttcaacGAAGTAGTAGCCAAAATG
GATCATTCGGCTCGTTGAAAAAATGGAAGAAGAAAACAATATTCAAAGAA
CTTTTCAATTTGTAATATCCCCGTATTTTAAACGAGAAATtattaattct
ttaaaaatgtaaaagaaatGTTAATATTTTATTATATCATGTTTATTCTT
GATTATTCTCAAAGAACTTGTACAtaagtatttcaaaaattaaagatttt
aaattttttttttacagattttcgtAAATTGACAAAAGACAATTCTAAAT
AATCGAAATCTTATGGTAAATTAATcctattttaatttaaaagtcTCTAA
AGACAATAATTAGAGTTTGAGGCTAACTTAGCCCTCTTCGGTGCATAGTT
CTTAGGGGGCTTTTTTCAGGGAGGGTGTACAGACGCAGGGTACTGACCCA
TAgccaggtggtggtgtctatttttgcatttcagaaaagttacatgtttt
tttttataagcaagtgtctgcctctatatcaggct
Run BLAST on NCBI

protein sequence of TCONS_00054709-protein

>TCONS_00054709-protein ID=TCONS_00054709-protein|Name=TCONS_00054709-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MLVHLLIESVYQSNVIKMVYEQVQNFHQEKNDRITRWLNENTVDKEDLCL
PYFYIENVERTLPILSMQKMTSSRTSRSTVSDFSSSDEESLYDEYEDNDS
VFGSIINEDQFNLNISETNKRGKLTSDVVISKTIQGFEVLKVKWNTLNND
LLLKVENKLFPVHKNLLTAQSSFLNDRLKNNDDLILEIPGTIAEVTVVLE
IIYECKWSLNENNVNGVLKICKYLKLKAIVGDCEQYKKFLQRSSSQNGSF
GSLKKWKKKTIFKELFNL
Run BLAST on NCBI

transcript from alignment at scaffold_244:40784..49263+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054709 ID=TCONS_00054709|Name=TCONS_00054709|organism=Clytia hemisphaerica|type=transcript|length=8480bp|location=Sequence derived from alignment at scaffold_244:40784..49263+ (Clytia hemisphaerica)
ACAATCAAAAGTCCTAAGGACTGGAGGAACGTGAACTTTCAACATGGATt acattttttgacatttgtttctttttttctttagcGTGTGTTTTGTGTGT CTTGAAATGTACGACTTTGTTTACCCTGTTTTAAAGGAATTATGAAGACA AGTGtctgaaaagaattactttctaaTGAAGGGAACCTCCCCCATACTTC CAAACATCCTCTATTATGTTGAAATTCCTTAACTTAAAGTCCTTTATAAC CAGTTGATTTATAATTTGGAGAAAGTCCATATCTTAGTGGATGAAATGAT ATGGAATGGACATATCATTGAGACTTGCGCCAAAAAGATACTTGCACCAC TCTCGTACATGGAAAAAGTCAACCAAAATTGATGCTTCTATATTCTTTGT TTATGTATATTTCTTCATGTAAAGTAAGTAAATTCATTTTCTTCAACAAA TTCTGTTTGgtcttgttttttctttattggaGCTTTTATACTAATTTTac catttgaaaaaatttgttaaCTCGTTGTTTTAATTTCATGACCTTGTTAG TGATAAATGCTGATTTCTGAACCGGGAATAAGTTTTGCAGGACTTTTTTT TGGACAGTTTGAAACTAAGTACTGTTTTTTTCAGATAGAAATCCTAAACG GTCTTGCTTTTCGAGATAAAACCGGTTTTCGGCCTTGTTAATTTTATGTG ATCTACTTTACTGTACTGTTCTCAATAACAAATTCTtcttattgaatatt tctggaaaCTTCTAAATACAATAATTGCTGTACTGGTATTTCTGGATTAT TTTCACCAAAGAAACATTTTTACCGACAGGAACAATCAAAATCAAGATGT CTTCATTTCAAGACACTTTCAAATAAATAGTTCTTTCGGTGTCTTGTGTC TTAGACACCGATGTGTCTTTGATTACAAATGAAACTCTTGTGATGTTATA TTTATAGACAAAGAAAACTGAAGTATGGAGACTTTTCTAAAATACGATAA TTGGTGCTAATTCTGTACTGGAATTCTTTTCAAGGAAACGCCTCCCTACG AAGTAGTTCGCTGCAATTATAAAAATTTCGTATTTGTTTTAGCACACATT TGAAAACAATGCTAAAACCGTTACATTTTGTCGGTGTTAATTCGACCAGG CTCCAGACGAAAAtgttttataatctttttaaactGATTATAAGGATTTA AAGGGATTTAAAATCGAGTAATTTTAAAGAACTGAAGttaagaaaaagtt gaatggGCNAAGGGATTTAAAATCGAGTAATTTTAAAGAACTGAAAttaa gaaaaagttgaatggGCATTCCTGATTATCCTGCTACAGTATCTACTATG AGTaagttttataagaaaaaaaaatacatgtTTCATACATTATCTCGATT CAAAACAATGAATCTTTGATTCGAATTTGCTTTTTAAGTATAATATTAaa acaagctttatttttgaaagcaTTGGTGGTCAAATCGCTTTTTGTCACTT TTACGAATAACTTGAGTTACTTTTTGTACAATCCTTGTTGTGAAACttta aataaattcttttcctataaaaaaagccttttttcgAATTCTTTTCTTCC TTCCTTGCTTTATTTTTAATTATAGAAAAGGATCTGTCACTTCTTTTGCT TGAGTTCCTTTAGCGCTTGTTCTTTGATAGATTATGATTTCTATAAAAAG GCTTTTAGTTACACTAATCGATCATATGACATTAGGCTTACTTAAATTAT ATTCGAACTTAATTATGGAATTAagtggaatttttttcattgaactTTTC AACGactacaatttttgaaattcaactgTTTTTTGCTCGGACACCGAACC AAGGATAATTTAGTagttcattttttgattttgctgaTGAAccttttaaa gtctattcacgataagtgtgcactcttttttcttttacctataccttttg aaggaattcttcaatctttataaatttggtatcgttggagagatatttgt gagNtataacttttgaaggaattcttcaatctttataaatttggtatcgt tggagagatatttgtgagtggaacaatttgaaataaaaaaatcttcaaaa atattctaaaaaagaagatgaaaatgaagaagatgaaaataaagaagaaa aaaatgaagatctggtagaaaattgctaaaactttcattttcactggaga gattctttgatcactaaaatatttattcaatacaaagttatgatacaaag ttaataagtgattgaccccaaaaaacagcagaaaacagcgtttctagacg tcaattagcttataactttgtttgacatcttttgactgaatgattatttt tgagaaattttttcacagtgatgacgttcgatgatcaaggtttcactcca gtgaaaatgatagttatagcacttgtctacaagatcttcatttttttctt cttcattttcatcttcaatttcagaatttttttgaagatttttttatttt aaattgttccactcactaatatctttccaatgacaccaaatttataaaga ttgaagaatttcttcaaaagttataggtaaaagaaaaaagagtgcacact tatcgtgaatagactttagtataaTTTGTAGGAAACCCTTCTTATCCCGC AATCACgtcgaaaatattttctcaTCGTGCCCATTACAACaccaaagaaa ttttcttaTCAATCACACATCACGCTTTTTGAAATCTTAGTAGTGCATGC CTTTCATGATTGTATACTTCTGCAGTGCTGTGATATTCCGTAACGTTgcg gttttttcgaaaaaagcaaaatcaggaaaaatctCACTTATTTAACAAAA TGATTGTGAACAATCCTATAGGAAATTAAAATCCAGGGATGAAAAGTTTA CTTTTAGGGCTATTCTACAAAATACACATGAATTTGAGACCCCGCACGTC ACCCTGACTGTGACCCCGTTCTTGGTTTGAAGGCAAGCGTTGTGAAATTT TGCAGTGGAAACGCTTCGAAATTTGTGCGGAATCTGATAATGCCAAAGTT GTTAAATTTCGCATCGCTGTCATTCTATGCAAATTTGCCGGACTAATCTT AAggtattgttttgatttgatttatgAAATCGCTCTCGTCCACTTAATCA ATGCNACggtattgatttgatttgatttgatttgatttatgAAATCGCTC TCGACCGCTTAATTAATGTAATGATCTAATAATTACTAAATTCTAGTGCA CTAAATTCAtgtaatagtttagtaattactaaATACGTCATGATACCATT ACAAATTATCAAATACGTCTTATTGTCTTTCtttaaatgaaatattttta attaagAAATGGGTGATTTGAAATTGTCAAAGAAATGGAAACTATGTGCC GATATTGTCATACACAAAATACACAAAATTGCTCAAACTATGTGCCGTTA TTGTCATGCTCCTAAATCGATATGCTTAATTTGAACATGCCTTAATGTCT TTTAGGTACTAGACGGTAATAATCTAATCTTTTTTTGtgaataatgattt ttaaaTGAAGGTCTACTATAATGAGTAAAATGATTCATTGAAATTTCTGG AACTGTGAAACCAAACGATGGCAAGATTTTTGAACTCTAAGTTAGTTATG GCATTGTAAAGCCAAATGAATTAAAAACCATGTACGGAATTTACAGTAGA ATCTCTCTATCTTGAAGTCCCTCTATCACGAACAAAACTCTCGATCGAAG GGAATATATGgtaaacatgttttttataagaacatccaacattttttagG CCTTcgaatattcttaattttttaagttttaagccaaaatgttcttattt tcaccattttgtgagtgtttttcTGCAAtattctaagaaattgggtttTC TAGAGTCCGCAATGTTTTCAATGTTCTGAgcttgtttttgatattttggc catcggaGCCGCCTTATGCGTTTAGATAGTTTGTATTCTTGATTCTCATT CttaaaaattacgaaaatccgAGATTTCAAATCGTCGTTTCTCGGCTCAA CGTAAGCtttttaaattgatttgataGTCTCACTCAGAATAATGAAAAGT CTGTAATTGAAGCTCTTTACTTGGATACCCCTTCAAGTTATTCCGGTCAA ACCAAACTTTCTATTCCTCCAAATATCCTTATGTTTGCAAATAGCTAATG AAAAAAGGATCAGACTCTATATCGAACAATCTTTTTTCCCCTTGCAAGTT CGAGATAGAGAGACTTCACTTTGTGTAAAGTAATTTATTAGATTAGGAAA CTACCAACTATTGTGTTTGCTTTCAGGCAATTTCTGACCTTACTTTCTAG TGTGACCACCTGTTGATTTTTAAACGTGTTTCAATCATAGAGAAATTACT AACAACCCACATCAACGAAATCGAAAGAGCTCTAATTTTGTCGTAATTTG TTTCTAATtagtattttattttcaaaccaCGTTTTCCTTACTATCTTGCC AACTTCAATTTAAACGCAACCTGCTGCTTTCTTGAGTGATCTcattaact tttccttattaTACCCACAAGgacaagaaaaatctttaatGACTTTGAGA TTCTTGCACACGAAATTAATTAGTATCCTTTGAGAAAGTTAATTTTACGT AAAGCCGGTGAAACACGTCCTTGTTCTGGACTTCTATATTTGTTAGCTTT ACTATTTGATACCTAATAACTCCATAAAACTCGTACAATAGCTGGCTTGG CTTGGCTTTAGCATTTGACCTTGAGTGACCGCATATTGTAATGAACACAA TTGaagaaatttctcaaaatcCACAAATTTTATATTCAGATCTTGAAAGT TCTTTATAGAAGACTTGTCCAAAATACCGTATTTTTAAGGCAAAATTACA CATGAACAAGTTTGTGGGTTAATTTATAAAAGAGTCCTTTCCCCTCGGAA GTACTCTACTTTTATTATCCTAATGGAAAATTCCATCCAACCCACACACC TATCAATCAAAAAACGCACCCATTTTTTACATAAGAAGAACTTCAATCTA TTTTCGGTACAGTATTATTTTTCTAACCATTATTTCTATCGTTTAACAGC AACCTGCGAAAAGTGGTTTCATTATCACATTTTCAATGCctgttattttg aaaaagattttcccaCAAATGCGTCATCATTtgcagaaaatttaaaaaga tctAAAGAACACTGCACTGGAGAGCTcgtttttgccaaatttcaaaCTTT ACCACCTTAGTTATATTGTCTAAAACCCTTCATCTGTGAGATCAAAGCAA TAGTGACATCTCATTCTAAAACCCTGTCTCCGGGGCTTGGATGAAGATAT CCTAGCATATCCTATGTTTAGATACCACATCTGCTTTTAATACTTTAGGA TTTAAGAATGTTAAATAAATGAGAGAGGGGAGAAATTATCTAACTGCTTT CGTCACTCTTGttataacttgcatcagtatgAGTTTCAcaattttatata agaacactGTATGCTATAGAACATCAAGTTTATCAAAGTTTAAGAATGTA TTCGATATCTATTGATCATTTGAAAAAGGAGTTGACTGCAGTAGCttagc caagaggggcgcaaaatttgtgtaggagagcataTTCTTATGCCATTATA ATTATCTCTTAATaccatgaatagataattacagtgtcataaaaatctgc tctcctacacaaaatTTGCGTCCCTTTTTGGCTACGCTACTAATTTTGTC GTAATTTGTTTCTAATtagtattttattttcaaaccaCGTTTTCCTTACT ATCTTGCCAACTTCAATTTAAACGCAACCTGCTGCTTTCTTGAGTGATCT cattaacttttccttattaTACCCACAAGgacaagaaaaatctttaatGA CTTTGAGATTCTTGCACACGAAATTAATTAGTATCCTTTGAGAAAGTTAA TTTTACGTAAAGCCGGTGAAACACGTCCTTGTTCTGGACTTCTATATTTG TTAGCTTTACTATTTGATACCTAATAACTCCATAAAACTCGTACAATAGC TGGCTTGGCTTGGCTTTAGCATTTGACCTTGAGTGACCGCATATTGTAAT GAACACAATTGaagaaatttctcaaaatcCACAAATTTTATATTCAGATC TTGAAAGTTCTTTATAGAAGACTTGTCCAAAATACCGTATTTTTAAGGCA AAATTACACATGAACAAGTTTGTGGGTTAATTTATAAAAGAGTCCTTTCC CCTCGGAAGTACTCTACTTTTATTATCCTAATGGAAAATTCCATCCAACC CACACACCTATCAATCAAAAAACGCACCCATTTTTTACATAAGAAGAACT TCAATCTATTTTCGGTACAGTATTATTTTTCTAACCATTATTTCTATCGT TTAACAGCAACCTGCGAAAAGTGGTTTNCAGATCCATAGGCCGCctaact gaaaacgaaagtgaaatctaccattttgaaaaatttatccctaCACGCCA ATTCGACCGCGTCCGCGGAATGTGGCtaattctcggggtcaggtgctgta tcataaaaatctgctctcctacacaaattttgcgcccctcttggctacgc tactgctGACTTGGCGGACTTTCTTACTAATCCGCTGCACGACTCACATA TTCAAGCTACCGGTGAATATCTACCTTCCATTAATTAGAAGATTCAGGTT ATTTATAGACTCCGAATACCAACCCTCAGGGAAACTAAATTTATATTCCA AAGTGACTTCTTCAAAACCAAACATCTCCTTAGCTTCTGAATTTTGCTTA TATTTCTATTAACGAGAGTGAGTTCCGCACTCACAAAGCTACAAAGCTCT TACTATCCAAACCGCACCATGTTCCATACCTTGAAGCTAAGTTGTAAGCA CGTTAGAATAGTTTCTGATCTATTCTTATACACACGGTCAGATATCTTTT ACAATTGTCTATAAACTTTTATTGTCTTTCTTCTCTctatttttaatcat tttttttgaCATAATGACGTTATTAAATAATAAGAATGCGACTGGATCTC GCAGTAAAGAGAGGTTGTGTAGAAAGAAGGCCgttgaaatatattttgtt tttgtttttccttcTCAGTGGAAGTAATAAGTCAATGATGATGGACGTTT GAGAGTAACTTGACATTTCGAATGAGAAAAAGATAATTGCATAACGGACA AGATAATCACCCCCTGTAAATAGcaacaattaaaaaattgaaatgatatt TAAATGTTGGTGCACTTGTTGATTGAATCAGTTTATCAATCGAATGTCAT CAAGATGGTTTACGAACAAGTGCAAAATTTTCATCAAGAGAAAAATGATC GTATTACTCGTTGGTTGAATGAAAACACTGTGGATAAGGAAGACTTATGC CTACCTtatttttatattgagaatGTTGAACGTACTTTGCCCATCCTCAG TATgcagaaaatgacgtcatcacgaACATCCAGAAGTACGGTATCCGATT TTTCATCTTCAGATGAAGAAAGTTTATATGATGAGTACGAAGATAATGAT TCTGTTTTTGGCTCCATTATTAATGAAGACCAGTTTAATCTCAATATATC GGAGACGAATAAGCGAGGCAAATTAACCAGCGATGTAGTAATTTCAAAGA CGATTCAAGGCTTTGAGGTACTGAAGGTCAAATGGAATACCTTAAATAAT GACTTGTTATTAAAAGTTGAGAATAAATTATTTCCAGTCCATAAAAACTT GTTGACGGCCCAGAGCTCATTCTTGAATGATCGATTGAAAAATAACGATG ACTTGATTCTCGAGATTCCAGGTACAATTGCCGAAGTGACAGTTGTATTG GAAATTATTTACGAGTGTAAATGGTCCCTTAACGAGAACAATGTAAATGG AGTCTTAAAGATTTGcaaatatttgaaattaaaagCCATTGTGGGCGACT GCGAGCAgtataagaaatttcttcaacGAAGTAGTAGCCAAAATGGATCA TTCGGCTCGTTGAAAAAATGGAAGAAGAAAACAATATTCAAAGAACTTTT CAATTTGTAATATCCCCGTATTTTAAACGAGAAATtattaattctttaaa aatgtaaaagaaatGTTAATATTTTATTATATCATGTTTATTCTTGATTA TTCTCAAAGAACTTGTACAtaagtatttcaaaaattaaagattttaaatt ttttttttacagattttcgtAAATTGACAAAAGACAATTCTAAATAATCG AAATCTTATGGTAAATTAATcctattttaatttaaaagtcTCTAAAGACA ATAATTAGAGTTTGAGGCTAACTTAGCCCTCTTCGGTGCATAGTTCTTAG GGGGCTTTTTTCAGGGAGGGTGTACAGACGCAGGGTACTGACCCATAgcc aggtggtggtgtctatttttgcatttcagaaaagttacatgttttttttt ataagcaagtgtctgcctctatatcaggct

Coding sequence (CDS) from alignment at scaffold_244:40784..49263+

>TCONS_00054709 ID=TCONS_00054709|Name=TCONS_00054709|organism=Clytia hemisphaerica|type=CDS|length=807bp|location=Sequence derived from alignment at scaffold_244:40784..49263+ (Clytia hemisphaerica)
ATGTTGGTGCACTTGTTGATTGAATCAGTTTATCAATCGAATGTCATCAA
GATGGTTTACGAACAAGTGCAAAATTTTCATCAAGAGAAAAATGATCGTA
TTACTCGTTGGTTGAATGAAAACACTGTGGATAAGGAAGACTTATGCCTA
CCTtatttttatattgagaatGTTGAACGTACTTTGCCCATCCTCAGTAT
gcagaaaatgacgtcatcacgaACATCCAGAAGTACGGTATCCGATTTTT
CATCTTCAGATGAAGAAAGTTTATATGATGAGTACGAAGATAATGATTCT
GTTTTTGGCTCCATTATTAATGAAGACCAGTTTAATCTCAATATATCGGA
GACGAATAAGCGAGGCAAATTAACCAGCGATGTAGTAATTTCAAAGACGA
TTCAAGGCTTTGAGGTACTGAAGGTCAAATGGAATACCTTAAATAATGAC
TTGTTATTAAAAGTTGAGAATAAATTATTTCCAGTCCATAAAAACTTGTT
GACGGCCCAGAGCTCATTCTTGAATGATCGATTGAAAAATAACGATGACT
TGATTCTCGAGATTCCAGGTACAATTGCCGAAGTGACAGTTGTATTGGAA
ATTATTTACGAGTGTAAATGGTCCCTTAACGAGAACAATGTAAATGGAGT
CTTAAAGATTTGcaaatatttgaaattaaaagCCATTGTGGGCGACTGCG
AGCAgtataagaaatttcttcaacGAAGTAGTAGCCAAAATGGATCATTC
GGCTCGTTGAAAAAATGGAAGAAGAAAACAATATTCAAAGAACTTTTCAA
TTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034470XLOC_034470Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054709-proteinTCONS_00054709-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054709-exon-scaffold_244-1491911889:40784..41206TCONS_00054709-exon-scaffold_244-1491911889:40784..41206Clytia hemisphaericaexon
TCONS_00054709-exon-scaffold_244-1510915933:40784..41206TCONS_00054709-exon-scaffold_244-1510915933:40784..41206Clytia hemisphaericaexon
TCONS_00054709-exon-scaffold_244-1575043694:40784..41206TCONS_00054709-exon-scaffold_244-1575043694:40784..41206Clytia hemisphaericaexon
TCONS_00054709-exon-scaffold_244-1491911889:47902..49263TCONS_00054709-exon-scaffold_244-1491911889:47902..49263Clytia hemisphaericaexon
TCONS_00054709-exon-scaffold_244-1510915933:47902..49263TCONS_00054709-exon-scaffold_244-1510915933:47902..49263Clytia hemisphaericaexon
TCONS_00054709-exon-scaffold_244-1575043694:47902..49263TCONS_00054709-exon-scaffold_244-1575043694:47902..49263Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_244supercontigscaffold_244:40784..49263 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.05203 3.96894 2.93869 2.21934 11.8458 8.51611 16.7349 16.5279 9.8643 10.9027 5.40855 21.3245 12.1054 13.1369 12.0924 8.2032 35.2516 21.3049 45.2037 29.7487 18.0433 16.3066 24.6728 22.5488 13.4278 15.3798 8.29255 6.25908 10.6229 11.7142
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054709 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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