TCONS_00054610 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054610
Unique NameTCONS_00054610
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2111

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054610 ID=TCONS_00054610|Name=TCONS_00054610|organism=Clytia hemisphaerica|type=transcript|length=2111bp
ATTGTACAAAgtatgttctaataaaaagtgTAGTTTGTACGGTGCTCAGG
TGCCATCTTAATTTATATACTCGATAATATACAGACCCTTGAAAATCAAT
GCAAAATCAGCTGAtagctttgtttttttcaaatgtttagcGTAGTATTT
TCGGTCCGCGTTTTTAGCATTTACCGTTTTTAATTGGTCGAGCAAGAATC
TGGAACGAGCCGCGTCCTGATTTAAAAATTCTCTTGTGAAAGAATCTTCA
CTGGTCCAGCACAGTGAAAAGATAACCGAATTCCTTGATCTTTACTTTGA
AAGGCATCCAGTCACTACATCATAATTACCATTTCCTACATTCAATTCGC
AAAGAGCTGAAACATGTCTATTCAGATATTCCAAGATTCAGAGAACATTC
CAGGCCTTGGAAAGAAGAACAAACGAGGAGATGAAAATGGAatgaaaaca
aatataccaAAACCCACTAAACGTGTTGCACTTGGAAATATAACAAATCA
GGTTCATGGTCATGGAAGCAGAATTCAACCTTCAAGAGCTGCAAAGGATA
AACATAAGgccAACTACCATGGAACAAAATCTGATGAgtctaaagttttt
gaaaacaaaccaaaaaGGACAAATAAATTATCTACATTAAAAGATTCTCC
TATGATTCTATCCCTGACACCATGTACGACAGAAAGTTTTGAAGATATTG
ATACAGATGAAGTATTACCAAACATTCTGAATATTGACCAAAATACAGAT
TCTGACTTTGATGTCCCTGAATATGCACAAGACATACATAATTATTTGAA
AAAGGCAGAGatGAAGTTTTTACCAAAGagaaattatatggaaaaacaAG
TTGACATAAATAAAAGCATGCGTTCAGTTCTTATTGATTGGCTGGTAGAA
GTAGCAGAAGAATACAAATTAAATCCTCAAACGCTTTTCCTGACTGTAAA
TTATATCGATAGATTTCTTTCGTGTATGTCAGTTTTGCGAGGAAAACTTC
AACTTGTTGGTACTGCTTGTATGTTAGTAGCATCgaaatttgaagaaata
taCCCACCAGAAGTATCAGAATTTGTTTACATAACAGACGATACATATAC
TGCCAAGCAGGTACTTCGTATGGAAAGTTtagttttaaaaactttacaat
tcgATGTCAGTGTACCAACCTGCAAAGACTTCTTGAACAGATATTTGTTG
GCAGCAGGTGCTGCTGAAGAAAGTCAACTTCGTTATTTATCACAATATTT
GACAGAACTATCACTAGTTAACACTGACATTTGTTTAACGTATCGACCTT
CAACGATCGCTGCTGCATCCGTATTAGTGGCAAATAATACTTTGAAATTG
GAATCTTGGACGCCGACCTTGCAACATTACAGTGGATATACGACGTTCGA
ACTAAAGAATTGCGCTACCGATATTAGGAGGTTTTTCGCTAATGCACCTA
ATCTTCAACAGCAAGCAGTTCAACAGAAATACAAAGCACCGAAGTTTGGT
TGCGTATCACAGTTATCTCCCCCTCAAACTCTCGTTCTATGAGATGTCga
ttatattatttttatacGCTTGGGATTACGTTTTTACCGCAAATATTTTT
GATAGTTTTCACTGGTCCTGGTCTTGCCGTTATAATGTGCTGCTGTATCC
TCCTCCAAAAACGCATGCGTACTTTGCACAAAGAGTACACTGGTTGCTTC
AGGAGAATTGATATACGATATCCTTTTCACACAACTGGATCCTTActgtt
ttatcatttttgtttttcaccCTCCCccgttttatttatttcttacttac
ttgcttttattcgtATTTTACAAACAACAGACTTGTACATATGGATATGA
AAATTATTATTGtatattttatgatttattgCTTATCATTGTCAcattta
tcattttttcttcttcttgatcaaattttacaaattcttTTTACGTCTCG
TATGTACATGTATAGATATTATCGTAATAAATTAAtactttaaaaatcaa
ttaagATGTTTTACTTTCTTTCTTATAACTTGATGTTAAAAAGTGTTAAA
GATTAATTTTGAAAGGTTTGACCATTTCCCCACTATTTCAAAGTCTTTGC
TAAAATGTAAC
Run BLAST on NCBI

protein sequence of TCONS_00054610-protein

>TCONS_00054610-protein ID=TCONS_00054610-protein|Name=TCONS_00054610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=392bp
MSIQIFQDSENIPGLGKKNKRGDENGMKTNIPKPTKRVALGNITNQVHGH
GSRIQPSRAAKDKHKANYHGTKSDESKVFENKPKRTNKLSTLKDSPMILS
LTPCTTESFEDIDTDEVLPNILNIDQNTDSDFDVPEYAQDIHNYLKKAEM
KFLPKRNYMEKQVDINKSMRSVLIDWLVEVAEEYKLNPQTLFLTVNYIDR
FLSCMSVLRGKLQLVGTACMLVASKFEEIYPPEVSEFVYITDDTYTAKQV
LRMESLVLKTLQFDVSVPTCKDFLNRYLLAAGAAEESQLRYLSQYLTELS
LVNTDICLTYRPSTIAAASVLVANNTLKLESWTPTLQHYSGYTTFELKNC
ATDIRRFFANAPNLQQQAVQQKYKAPKFGCVSQLSPPQTLVL
Run BLAST on NCBI

transcript from alignment at scaffold_243:288224..295205-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054610 ID=TCONS_00054610|Name=TCONS_00054610|organism=Clytia hemisphaerica|type=transcript|length=6982bp|location=Sequence derived from alignment at scaffold_243:288224..295205- (Clytia hemisphaerica)
ATTGTACAAAGTATGTTCTAATAAAAAGTGTAGTTTGTACGGTGCTCAGG
TGCCATCTTAATTTATATACTCGATAATATACAGACCCTTGAAAATCAAT
GCAAAATCAGCTGATAGCTTTGTTTTTTTCAAATGTTTAGCGTAGTATTT
TCGGTCCGCGTTTTTAGCATTTACCGTTTTTAATTGGTCGAGCAAGAATC
TGGAACGAGCCGCGTCCTGATTTAAAAATTCTCTTGTGAAAGAATCTTCA
CTGGTCCAGCACAGTGAAAAGATAACCGAATTCCTTGATCTTTACTTTGA
AAGGCATCCAGTCACTACATCATAATTACCATTTCCTACATTCAATTCGC
AAAGTAAGTAAACCATTTTTGAAATCGAATGTAATAATTACCATTTTGAA
AATCGAAGGCGAAACATTCGAATGGAAATGTTTCCCTTGGAAACGATCTA
CTAACTTTTGGGCTCTGCTTCTAAAAAAGTGTGTCAAACTCTTTTTGAAA
ATCGTCTGTTCTGTATGTTTTAGGAGCTGAAACATGTCTATTCAGATATT
CCAAGATTCAGAGAACATTCCAGGCCTTGGAAAGAAGAACAAACGAGGAG
ATGAAAATGGAATGAAAACAAATATACCAAAACCCACTAAACGTGTTGCA
CTTGGAAATATAACAAATCAGGTTCATGGTCATGGAAGCAGAATTCAACC
TTCAAGAGCTGCAAAGGATAAACATAAGGTAAAAAAATCAGAAGAATTCA
GATAATTTAAGCTCTATTCCGTCCTATCATGCTCCTATCAGAGAGTATAC
ATATATAGAGCAAATCCAATTGCTGGGAAATCTTAGATCGTTGGGAACCC
AAATAAAACAGTCAGGCAATTGTAGTCACATCATAATTTATTGTAGGTGC
AAAGTTGACGAACAATTTTCTTGTTATTTTTTACCTTGAGTGTTTGAATT
TTGAGAATTTTCTGGGCCAGAAAATCGACGGCTAAAGACCTACATTTTAC
AGACCAGATCTTTTTCTTAATGCTTTGATTGGTACATAAAATGAATATAA
TCAGCCCTCTGAAAATTTTCTATTTGCTTGGGCCAAAATAATATGATCTG
AGGCCTAGAATGTTACCCAAAACGTCATTAAAATGAATTAGGTATATAGG
TCTGAAGAATTTTGGTTGCATGTTTTCAATCAAAAATTTTATTGTCTGCA
ACCCAGTCTGACTAATTGAAAAAATTTAACTAATCAAACTTTATTGGGCA
GTTCCAGAAAAAAACCATTACCCCATGTGGACGACAGGGTTTTTTGGATT
TTTTTTTCACTTGGAAATCCTGATAAATTTGGAAAAGGTTTCGGAAAATC
CAGTATTTTTCCTCATTATTTATTACTGATTGGAAAATCCATAAAGTTTG
CTCTATTTTCTTGCTAAGTATGGGAAAATCCAATTTTCCCATAGAAAATC
TTGAATGTTACGGAAATCTTGAAGTTTTTCAAATGTAAATTGTTACGGAA
AATCCATGTCATCCACAGGGGGTAACGGACTACAACTTAAACCGCCCATT
GTTACAATTAAAGTTTGATTAAAAATTAATCAAACATATCAAAAATTCTA
TAAAAAACAAACAATATAAAATGGGTATTTCAGCTCAAGTATGGATTAAA
TAAATAAATTAAACAAAAATCAATTTTTAGGTGCAAATACTATATTACTT
TTGTGAAAGTTTTCACAAATTCTATGGAATTTCCAATAGTCGCGCGGCTG
AGGTCGAAAAAAGTGGCTAGAAAATGATTTTCGTGATACACCTCTTAGAT
TCCACTTTTTTTTTTCCAAGTTATGGGCCTATTTGTGGTCAAAAAGGTGT
TTAATTTTGCATAAATTAATGCAGATTGTGGGGAAATTCCCTGTTTTCCA
TCAGTTTTTTACCACAAACAGGCCAATAAATTTTGATCTAGAGAAGTTGG
GACTTTGGTGTAGTACACTTTTTTGCTCAGTTTGAAGAGCTCTATCATGT
GATATAGGTCTTTTTTTAATTTGAAGACCCCCCAAAAATCATGAATTTCC
AGGCCTTGCAATTTTGCCTGGAAACGCAAAAAATCACCAATTACTCGTTA
CTTGCACGATAATATCGTGGAAACTTTTTGATTTTGTAATCTACACATAC
TAATTCACGAGTTTCCGTTGTTTTTTTTGGAATCTAAAAGATGTATCACG
AAATGAAACGTTTTTCGACCTCAGCCGCGCGACAAGGGTTTAAAATAAAA
AATTTAAGGAAATTTTCGTAGTATGTGAAAAATGGATTTCAGAGTGCTTT
TTTTATCTGAATATTCCCATTAACAGTAATATATCAATTTTTTCTGCAAG
AGCTCTTTCTGAGAGTTTGGGAATAGCATGCAAGCTGTACCAGCGTTTTT
ATGACTGCTCCAAGCAAGCCCACACCAAATTCTTAAAATAATAAATTGAA
CCTGGATTGGCCAGTGCTACCAATGATTAATAAATTAAACATAATTTTTT
CTTTGAAACACAAGGTTACAAAGACCATCAACAGTTGTATATTTCATTTA
CCTCAACACAATCCAGTCTGACTTGACTGGAAGACCTTTTGACAGGTTTT
AAGTATTATTAAATTAGTTTAACTATTGACAAAATGATAGACTTTGCACT
TGTTGCATTACAAATCAGGATCTTGTGAGATGCTGAAATAGTTAGCTAGG
ACAATGATACAAACTTAATTTGAAAGTAATGTTTTTCTTTTTTAGGCCAA
CTACCATGGAACAAAATCTGATGAGTCTAAAGTTTTTGAAAACAAACCAA
AAAGGACAAATAAATTATCTACATTAAAAGGTAAATCCTATAGCATGGCA
GTTTCTTGACTTTCTCAAGAGAATAAAGTTTTAGCTGGGTAGGAAAAGTA
TTGTGCACTTCAGATCTTTGGAATAACAGCAATATCCTAATCATTCATTG
AACTACTCGGGCCGGAAAAATATTTTGTGAGAAGTGACTTTTGCAAATAA
AATTTTCAATAACATTTCATGGAAAACTTTTTGAATTGTCATTTAAGTTA
TTTTATAGAAATAGAAATAGATTAAATTTTTGTGAATCAGCTTTTTAGAA
TTTTTTTACAGGACTTTCCTGGACTTTCACGTATTGCCCAAAAATCACAG
AATCTGCGAAAATTTTCCTTTAAACTAATTCTCAGTCATTATTAATTTTC
CTTTTAAAATTCACTACATGGATCACTATGCGATTTACAATGCAAAATCA
AGCTACCAAAACTATTGCTTGCAATAAGTGCAATAATTTAGAAGAATCAT
GGTTACTTTTTTAATAAAAATCTGTATTCCAAATCTACCCGTTTTTAGAT
TCTCCTATGATTCTATCCCTGACACCATGTACGACAGAAAGTTTTGAAGA
TATTGATACAGATGAAGTATTACCAAACATTCTGAATATTGACCAAAATA
CAGATTCTGACTTTGATGTCCCTGAATATGCACAAGACATACATAATTAT
TTGAAAAAGGCAGAGGTAAGTTTTATAGATTGTCAATGAGTTAATTTAAT
GGATCTCCCCCAAAAATATTTGCTAGCATTTCAATTAATAAATTATAACC
ATTGATGCAAAGAATCATTGGTTATTTCTTTTTTATAAGTAACCCACATC
GTCCAGCATCGTCTGGACTAAGGCTATCTTTGTGGAACAACATAAGGCAT
TGCATTTTGTTTGAAAACTTTGCTTTTCTTTTCAGATGAAGTTTTTACCA
AAGAGAAATTATATGGAAAAACAAGTTGACATAAATAAAAGCATGCGTTC
AGTTCTTATTGATTGGCTGGTAGAAGTAGCAGAAGAATACAAATTAAATC
CTCAAACGCTTTTCCTGACTGTAAATTATATCGATAGATTTCTTTCGTGT
ATGTCAGTTTTGCGAGGAAAACTTCAACTTGTTGGTACTGCTTGTATGTT
AGTAGCATCGTAAGTCACATCCACTACTTCACTTCATTTTTTTTCACACT
GACTTAATCACTGTAAATCTGGCCTGATTTGGAAACTAAAAAGTAAGACC
ACTACCAGGCAGTATTTTGGGTTCTTTTTTATTTTTCAAAGGAGTTATTG
GTTTACCAAGAAAGTTCCCAATGTTCATTGCCTAAGGAAAACCAAGCCAC
AAGACTTGAAAATTAAAGCTTAAAAAACATGTTTTTATTTGAAACAAGCA
AAAGAGGGTCTTCTGTCTTGTATGGTCAGTTACATTTTGTTTACTTCTCT
AGGAAATTTGAAGAAATATACCCACCAGAAGTATCAGAATTTGTTTACAT
AACAGACGATACATATACTGCCAAGCAGGTAATTTTATTGAAATGAAATT
CCCTCATTTAGCTCCAAATAGCCTTATTTTATTCTAATTTTGGTTAATAA
AAGTAACTAATCTGGCACAGGAGCAATAACATATCTTTTGAATTTAAAAT
TTTTTTCTCCTATTTTGCCATGATGAACACATTTTAAGCAAAATTTTGCA
ATTTCCAAAATCAATAATAGATAAACCCTTTTTTGATTTTAGTTGTTTTT
TTTTTAAGTTAGAGTTTCTCTCAACATTGCTCATGGGGTTTATTTTTTTC
CGTTCCAGGTACTTCGTATGGAAAGTTTAGTTTTAAAAACTTTACAATTC
GATGTCAGTGTACCAACCTGCAAAGACTTCTTGAACAGATATTTGTTGGC
AGCAGGTGCTGCTGAAGAAAGTCAACTTCGTTATTTATCACAAGTAAGAA
TTTCAAATTTTTCTTACTTGCTGATTTCTAAGAAAGCTGAAGAGTTATAG
TTCTCTTTCAATTTCTTTCCCTTCTATTTTCTCAATCAGGGAACGAGTTA
ACGATTTAGAAACTCGTTTGATTAAATATACGATGTATTTTCCACTCTAT
AGACTAATTTATAAGCTTCTATTTGCTTGGCGGCTCAATAAGAAGCTACT
TAGAAATTAGCTATTTTTTATATGTTGTATATCGCGATTTTGCTGAGTTT
TTAAATTTTTGCTTCGTACATTTCCAAAAACGCATCGCGAAACGCGATAA
GTTAATTCGAACCCTGTTAATCAATTGAACAATGAATATTATTTTCTATT
CTTTCAATTCAGTATTTGACAGAACTATCACTAGTTAACACTGACATTTG
TTTAACGTATCGACCTTCAACGATCGCTGCTGCATCCGTATTAGTGGCAA
ATAATACTTTGAAATTGGAATCTTGGGCGAGTGATTTAACTCTTAAAATC
CAAAGCTCTTGAATACTTTAGAGGACTAAAATCCTCATTTCTATAAGTTC
TTTCTACACAATTGAAATATTTTGTTTTTATCTGCACTTAATGCTTTTAC
AGTGGCTTTTGCAAGTCGTCTCTTTTCTTGATTTCGTTCGAACGGTCTGT
TATATGTACTAACTTGCTCTTTGCTACCTTAGTTCAAATGGGTCTAGGTC
CTGATGGTTTTTTTTGCCTTTTGTCTCAATAACTACTCGTTACCAGAAGA
GAAACCAAAAATCTCATATTACGCCTTAAACTTGGCAGGAAAGTGAGTTT
ACCAGTCAGTGCCAGCTCTTTAATTATTCAGTCCAAATGACAAGAACATA
ATTTCTAAGCTCTATTATGCGAAAAGTAATTTTCATAAAAACCCTGACTA
ATTATTTTGATTTCTATTTCAGACGCCGACCTTGCAACATTACAGTGGAT
ATACGACGTTCGAACTAAAGAATTGCGCTACCGATATTAGGAGGTTTTTC
GCTAATGCACCTAATCTTCAACAGCAAGCAGTTCAACAGAAATACAAAGC
ACCGAAGTAAGAATCTAATTTTCCCTTTTTCGTCTTGTTTTAATCCTTTT
TATATTCGGAGAGAGATGTCAACATCTCCATTCTGAAAGTATGACTTTAG
CCACTGGTGAACTTTTATTTTTGCCTATGTTTACCTGGTCAACATATTCT
CCCCTATTTGAATCTGATGAATTAGAACCATTGAGTTTCAAGCCGGAAGG
GCTAGAGGTCAATCTCTAACCTTTCTCAGGCAAGAAAAATTGAAGCCTTA
AAATATGCGCCGTATTTTTGATGACGGATTGAATGTAGCAATTCCTTTGT
TTACGAGTGATATATTTTTCGAAATTAAGCGGTAAATTTTTGTTTCAATC
TGTCATTTGTGTAAAAACCAGGCGGGTCGCTCAAGGCCGTGCAACTTTGG
TAGGATTTGTTGGCTTCAAATCCTACCAAAGAGATTGACATCTAGCCCTT
CGGGCTTGAAACTCAATGATTAGAACATCTAAATTTTGCTACGTGAAGAA
TTTTAATCACATTTGTGTCTCTCAAACAAAGTTTCTTATCCACAACTTTG
TATTTTCTTTGCAGGTTTGGTTGCGTATCACAGTTATCTCCCCCTCAAAC
TCTCGTTCTATGAGATGTCGATTATATTATTTTTATACGCTTGGGATTAC
GTTTTTACCGCAAATATTTTTGATAGTTTTCACTGGTCCTGGTCTTGCCG
TTATAATGTGCTGCTGTATCCTCCTCCAAAAACGCATGCGTACTTTGCAC
AAAGAGTACACTGGTTGCTTCAGGAGAATTGATATACGATATCCTTTTCA
CACAACTGGATCCTTACTGTTTTATCATTTTTGTTTTTCACCCTCCCCCG
TTTTATTTATTTCTTACTTACTTGCTTTTATTCGTATTTTACAAACAACA
GACTTGTACATATGGATATGAAAATTATTATTGTATATTTTATGATTTAT
TGCTTATCATTGTCACATTTATCATTTTTTCTTCTTCTTGATCAAATTTT
ACAAATTCTTTTTACGTCTCGTATGTACATGTATAGATATTATCGTAATA
AATTAATACTTTAAAAATCAATTAAGATGTTTTACTTTCTTTCTTATAAC
TTGATGTTAAAAAGTGTTAAAGATTAATTTTGAAAGGTTTGACCATTTCC
CCACTATTTCAAAGTCTTTGCTAAAATGTAAC

Coding sequence (CDS) from alignment at scaffold_243:288224..295205-

>TCONS_00054610 ID=TCONS_00054610|Name=TCONS_00054610|organism=Clytia hemisphaerica|type=CDS|length=10611bp|location=Sequence derived from alignment at scaffold_243:288224..295205- (Clytia hemisphaerica)
GTTTGGTTGCGTATCACAGTTATCTCCCCCTCAAACTCTCGTTCTATGAA
CGCCGACCTTGCAACATTACAGTGGATATACGACGTTCGAACTAAAGAAT
TGCGCTACCGATATTAGGAGGTTTTTCGCTAATGCACCTAATCTTCAACA
GCAAGCAGTTCAACAGAAATACAAAGCACCGAATATTTGACAGAACTATC
ACTAGTTAACACTGACATTTGTTTAACGTATCGACCTTCAACGATCGCTG
CTGCATCCGTATTAGTGGCAAATAATACTTTGAAATTGGAATCTTGGGTA
CTTCGTATGGAAAGTTTAGTTTTAAAAACTTTACAATTCGATGTCAGTGT
ACCAACCTGCAAAGACTTCTTGAACAGATATTTGTTGGCAGCAGGTGCTG
CTGAAGAAAGTCAACTTCGTTATTTATCACAAGAAATTTGAAGAAATATA
CCCACCAGAAGTATCAGAATTTGTTTACATAACAGACGATACATATACTG
CCAAGCAGATGAAGTTTTTACCAAAGAGAAATTATATGGAAAAACAAGTT
GACATAAATAAAAGCATGCGTTCAGTTCTTATTGATTGGCTGGTAGAAGT
AGCAGAAGAATACAAATTAAATCCTCAAACGCTTTTCCTGACTGTAAATT
ATATCGATAGATTTCTTTCGTGTATGTCAGTTTTGCGAGGAAAACTTCAA
CTTGTTGGTACTGCTTGTATGTTAGTAGCATCATTCTCCTATGATTCTAT
CCCTGACACCATGTACGACAGAAAGTTTTGAAGATATTGATACAGATGAA
GTATTACCAAACATTCTGAATATTGACCAAAATACAGATTCTGACTTTGA
TGTCCCTGAATATGCACAAGACATACATAATTATTTGAAAAAGGCAGAGG
CCAACTACCATGGAACAAAATCTGATGAGTCTAAAGTTTTTGAAAACAAA
CCAAAAAGGACAAATAAATTATCTACATTAAAAGATGTCTATTCAGATAT
TCCAAGATTCAGAGAACATTCCAGGCCTTGGAAAGAAGAACAAACGAGGA
GATGAAAATGGAATGAAAACAAATATACCAAAACCCACTAAACGTGTTGC
ACTTGGAAATATAACAAATCAGGTTCATGGTCATGGAAGCAGAATTCAAC
CTTCAAGAGCTGCAAAGGATAAACATAAGGTTTGGTTGCGTATCACAGTT
ATCTCCCCCTCAAACTCTCGTTCTATGAACGCCGACCTTGCAACATTACA
GTGGATATACGACGTTCGAACTAAAGAATTGCGCTACCGATATTAGGAGG
TTTTTCGCTAATGCACCTAATCTTCAACAGCAAGCAGTTCAACAGAAATA
CAAAGCACCGAATATTTGACAGAACTATCACTAGTTAACACTGACATTTG
TTTAACGTATCGACCTTCAACGATCGCTGCTGCATCCGTATTAGTGGCAA
ATAATACTTTGAAATTGGAATCTTGGGTACTTCGTATGGAAAGTTTAGTT
TTAAAAACTTTACAATTCGATGTCAGTGTACCAACCTGCAAAGACTTCTT
GAACAGATATTTGTTGGCAGCAGGTGCTGCTGAAGAAAGTCAACTTCGTT
ATTTATCACAAGAAATTTGAAGAAATATACCCACCAGAAGTATCAGAATT
TGTTTACATAACAGACGATACATATACTGCCAAGCAGATGAAGTTTTTAC
CAAAGAGAAATTATATGGAAAAACAAGTTGACATAAATAAAAGCATGCGT
TCAGTTCTTATTGATTGGCTGGTAGAAGTAGCAGAAGAATACAAATTAAA
TCCTCAAACGCTTTTCCTGACTGTAAATTATATCGATAGATTTCTTTCGT
GTATGTCAGTTTTGCGAGGAAAACTTCAACTTGTTGGTACTGCTTGTATG
TTAGTAGCATCATTCTCCTATGATTCTATCCCTGACACCATGTACGACAG
AAAGTTTTGAAGATATTGATACAGATGAAGTATTACCAAACATTCTGAAT
ATTGACCAAAATACAGATTCTGACTTTGATGTCCCTGAATATGCACAAGA
CATACATAATTATTTGAAAAAGGCAGAGGCCAACTACCATGGAACAAAAT
CTGATGAGTCTAAAGTTTTTGAAAACAAACCAAAAAGGACAAATAAATTA
TCTACATTAAAAGATGTCTATTCAGATATTCCAAGATTCAGAGAACATTC
CAGGCCTTGGAAAGAAGAACAAACGAGGAGATGAAAATGGAATGAAAACA
AATATACCAAAACCCACTAAACGTGTTGCACTTGGAAATATAACAAATCA
GGTTCATGGTCATGGAAGCAGAATTCAACCTTCAAGAGCTGCAAAGGATA
AACATAAGGTTTGGTTGCGTATCACAGTTATCTCCCCCTCAAACTCTCGT
TCTATGAACGCCGACCTTGCAACATTACAGTGGATATACGACGTTCGAAC
TAAAGAATTGCGCTACCGATATTAGGAGGTTTTTCGCTAATGCACCTAAT
CTTCAACAGCAAGCAGTTCAACAGAAATACAAAGCACCGAATATTTGACA
GAACTATCACTAGTTAACACTGACATTTGTTTAACGTATCGACCTTCAAC
GATCGCTGCTGCATCCGTATTAGTGGCAAATAATACTTTGAAATTGGAAT
CTTGGGTACTTCGTATGGAAAGTTTAGTTTTAAAAACTTTACAATTCGAT
GTCAGTGTACCAACCTGCAAAGACTTCTTGAACAGATATTTGTTGGCAGC
AGGTGCTGCTGAAGAAAGTCAACTTCGTTATTTATCACAAGAAATTTGAA
GAAATATACCCACCAGAAGTATCAGAATTTGTTTACATAACAGACGATAC
ATATACTGCCAAGCAGATGAAGTTTTTACCAAAGAGAAATTATATGGAAA
AACAAGTTGACATAAATAAAAGCATGCGTTCAGTTCTTATTGATTGGCTG
GTAGAAGTAGCAGAAGAATACAAATTAAATCCTCAAACGCTTTTCCTGAC
TGTAAATTATATCGATAGATTTCTTTCGTGTATGTCAGTTTTGCGAGGAA
AACTTCAACTTGTTGGTACTGCTTGTATGTTAGTAGCATCATTCTCCTAT
GATTCTATCCCTGACACCATGTACGACAGAAAGTTTTGAAGATATTGATA
CAGATGAAGTATTACCAAACATTCTGAATATTGACCAAAATACAGATTCT
GACTTTGATGTCCCTGAATATGCACAAGACATACATAATTATTTGAAAAA
GGCAGAGGCCAACTACCATGGAACAAAATCTGATGAGTCTAAAGTTTTTG
AAAACAAACCAAAAAGGACAAATAAATTATCTACATTAAAAGATGTCTAT
TCAGATATTCCAAGATTCAGAGAACATTCCAGGCCTTGGAAAGAAGAACA
AACGAGGAGATGAAAATGGAATGAAAACAAATATACCAAAACCCACTAAA
CGTGTTGCACTTGGAAATATAACAAATCAGGTTCATGGTCATGGAAGCAG
AATTCAACCTTCAAGAGCTGCAAAGGATAAACATAAGGTTTGGTTGCGTA
TCACAGTTATCTCCCCCTCAAACTCTCGTTCTATGAACGCCGACCTTGCA
ACATTACAGTGGATATACGACGTTCGAACTAAAGAATTGCGCTACCGATA
TTAGGAGGTTTTTCGCTAATGCACCTAATCTTCAACAGCAAGCAGTTCAA
CAGAAATACAAAGCACCGAATATTTGACAGAACTATCACTAGTTAACACT
GACATTTGTTTAACGTATCGACCTTCAACGATCGCTGCTGCATCCGTATT
AGTGGCAAATAATACTTTGAAATTGGAATCTTGGGTACTTCGTATGGAAA
GTTTAGTTTTAAAAACTTTACAATTCGATGTCAGTGTACCAACCTGCAAA
GACTTCTTGAACAGATATTTGTTGGCAGCAGGTGCTGCTGAAGAAAGTCA
ACTTCGTTATTTATCACAAGAAATTTGAAGAAATATACCCACCAGAAGTA
TCAGAATTTGTTTACATAACAGACGATACATATACTGCCAAGCAGATGAA
GTTTTTACCAAAGAGAAATTATATGGAAAAACAAGTTGACATAAATAAAA
GCATGCGTTCAGTTCTTATTGATTGGCTGGTAGAAGTAGCAGAAGAATAC
AAATTAAATCCTCAAACGCTTTTCCTGACTGTAAATTATATCGATAGATT
TCTTTCGTGTATGTCAGTTTTGCGAGGAAAACTTCAACTTGTTGGTACTG
CTTGTATGTTAGTAGCATCATTCTCCTATGATTCTATCCCTGACACCATG
TACGACAGAAAGTTTTGAAGATATTGATACAGATGAAGTATTACCAAACA
TTCTGAATATTGACCAAAATACAGATTCTGACTTTGATGTCCCTGAATAT
GCACAAGACATACATAATTATTTGAAAAAGGCAGAGGCCAACTACCATGG
AACAAAATCTGATGAGTCTAAAGTTTTTGAAAACAAACCAAAAAGGACAA
ATAAATTATCTACATTAAAAGATGTCTATTCAGATATTCCAAGATTCAGA
GAACATTCCAGGCCTTGGAAAGAAGAACAAACGAGGAGATGAAAATGGAA
TGAAAACAAATATACCAAAACCCACTAAACGTGTTGCACTTGGAAATATA
ACAAATCAGGTTCATGGTCATGGAAGCAGAATTCAACCTTCAAGAGCTGC
AAAGGATAAACATAAGGTTTGGTTGCGTATCACAGTTATCTCCCCCTCAA
ACTCTCGTTCTATGAACGCCGACCTTGCAACATTACAGTGGATATACGAC
GTTCGAACTAAAGAATTGCGCTACCGATATTAGGAGGTTTTTCGCTAATG
CACCTAATCTTCAACAGCAAGCAGTTCAACAGAAATACAAAGCACCGAAT
ATTTGACAGAACTATCACTAGTTAACACTGACATTTGTTTAACGTATCGA
CCTTCAACGATCGCTGCTGCATCCGTATTAGTGGCAAATAATACTTTGAA
ATTGGAATCTTGGGTACTTCGTATGGAAAGTTTAGTTTTAAAAACTTTAC
AATTCGATGTCAGTGTACCAACCTGCAAAGACTTCTTGAACAGATATTTG
TTGGCAGCAGGTGCTGCTGAAGAAAGTCAACTTCGTTATTTATCACAAGA
AATTTGAAGAAATATACCCACCAGAAGTATCAGAATTTGTTTACATAACA
GACGATACATATACTGCCAAGCAGATGAAGTTTTTACCAAAGAGAAATTA
TATGGAAAAACAAGTTGACATAAATAAAAGCATGCGTTCAGTTCTTATTG
ATTGGCTGGTAGAAGTAGCAGAAGAATACAAATTAAATCCTCAAACGCTT
TTCCTGACTGTAAATTATATCGATAGATTTCTTTCGTGTATGTCAGTTTT
GCGAGGAAAACTTCAACTTGTTGGTACTGCTTGTATGTTAGTAGCATCAT
TCTCCTATGATTCTATCCCTGACACCATGTACGACAGAAAGTTTTGAAGA
TATTGATACAGATGAAGTATTACCAAACATTCTGAATATTGACCAAAATA
CAGATTCTGACTTTGATGTCCCTGAATATGCACAAGACATACATAATTAT
TTGAAAAAGGCAGAGGCCAACTACCATGGAACAAAATCTGATGAGTCTAA
AGTTTTTGAAAACAAACCAAAAAGGACAAATAAATTATCTACATTAAAAG
ATGTCTATTCAGATATTCCAAGATTCAGAGAACATTCCAGGCCTTGGAAA
GAAGAACAAACGAGGAGATGAAAATGGAATGAAAACAAATATACCAAAAC
CCACTAAACGTGTTGCACTTGGAAATATAACAAATCAGGTTCATGGTCAT
GGAAGCAGAATTCAACCTTCAAGAGCTGCAAAGGATAAACATAAGGTTTG
GTTGCGTATCACAGTTATCTCCCCCTCAAACTCTCGTTCTATGAACGCCG
ACCTTGCAACATTACAGTGGATATACGACGTTCGAACTAAAGAATTGCGC
TACCGATATTAGGAGGTTTTTCGCTAATGCACCTAATCTTCAACAGCAAG
CAGTTCAACAGAAATACAAAGCACCGAATATTTGACAGAACTATCACTAG
TTAACACTGACATTTGTTTAACGTATCGACCTTCAACGATCGCTGCTGCA
TCCGTATTAGTGGCAAATAATACTTTGAAATTGGAATCTTGGGTACTTCG
TATGGAAAGTTTAGTTTTAAAAACTTTACAATTCGATGTCAGTGTACCAA
CCTGCAAAGACTTCTTGAACAGATATTTGTTGGCAGCAGGTGCTGCTGAA
GAAAGTCAACTTCGTTATTTATCACAAGAAATTTGAAGAAATATACCCAC
CAGAAGTATCAGAATTTGTTTACATAACAGACGATACATATACTGCCAAG
CAGATGAAGTTTTTACCAAAGAGAAATTATATGGAAAAACAAGTTGACAT
AAATAAAAGCATGCGTTCAGTTCTTATTGATTGGCTGGTAGAAGTAGCAG
AAGAATACAAATTAAATCCTCAAACGCTTTTCCTGACTGTAAATTATATC
GATAGATTTCTTTCGTGTATGTCAGTTTTGCGAGGAAAACTTCAACTTGT
TGGTACTGCTTGTATGTTAGTAGCATCATTCTCCTATGATTCTATCCCTG
ACACCATGTACGACAGAAAGTTTTGAAGATATTGATACAGATGAAGTATT
ACCAAACATTCTGAATATTGACCAAAATACAGATTCTGACTTTGATGTCC
CTGAATATGCACAAGACATACATAATTATTTGAAAAAGGCAGAGGCCAAC
TACCATGGAACAAAATCTGATGAGTCTAAAGTTTTTGAAAACAAACCAAA
AAGGACAAATAAATTATCTACATTAAAAGATGTCTATTCAGATATTCCAA
GATTCAGAGAACATTCCAGGCCTTGGAAAGAAGAACAAACGAGGAGATGA
AAATGGAATGAAAACAAATATACCAAAACCCACTAAACGTGTTGCACTTG
GAAATATAACAAATCAGGTTCATGGTCATGGAAGCAGAATTCAACCTTCA
AGAGCTGCAAAGGATAAACATAAGGTTTGGTTGCGTATCACAGTTATCTC
CCCCTCAAACTCTCGTTCTATGAACGCCGACCTTGCAACATTACAGTGGA
TATACGACGTTCGAACTAAAGAATTGCGCTACCGATATTAGGAGGTTTTT
CGCTAATGCACCTAATCTTCAACAGCAAGCAGTTCAACAGAAATACAAAG
CACCGAATATTTGACAGAACTATCACTAGTTAACACTGACATTTGTTTAA
CGTATCGACCTTCAACGATCGCTGCTGCATCCGTATTAGTGGCAAATAAT
ACTTTGAAATTGGAATCTTGGGTACTTCGTATGGAAAGTTTAGTTTTAAA
AACTTTACAATTCGATGTCAGTGTACCAACCTGCAAAGACTTCTTGAACA
GATATTTGTTGGCAGCAGGTGCTGCTGAAGAAAGTCAACTTCGTTATTTA
TCACAAGAAATTTGAAGAAATATACCCACCAGAAGTATCAGAATTTGTTT
ACATAACAGACGATACATATACTGCCAAGCAGATGAAGTTTTTACCAAAG
AGAAATTATATGGAAAAACAAGTTGACATAAATAAAAGCATGCGTTCAGT
TCTTATTGATTGGCTGGTAGAAGTAGCAGAAGAATACAAATTAAATCCTC
AAACGCTTTTCCTGACTGTAAATTATATCGATAGATTTCTTTCGTGTATG
TCAGTTTTGCGAGGAAAACTTCAACTTGTTGGTACTGCTTGTATGTTAGT
AGCATCATTCTCCTATGATTCTATCCCTGACACCATGTACGACAGAAAGT
TTTGAAGATATTGATACAGATGAAGTATTACCAAACATTCTGAATATTGA
CCAAAATACAGATTCTGACTTTGATGTCCCTGAATATGCACAAGACATAC
ATAATTATTTGAAAAAGGCAGAGGCCAACTACCATGGAACAAAATCTGAT
GAGTCTAAAGTTTTTGAAAACAAACCAAAAAGGACAAATAAATTATCTAC
ATTAAAAGATGTCTATTCAGATATTCCAAGATTCAGAGAACATTCCAGGC
CTTGGAAAGAAGAACAAACGAGGAGATGAAAATGGAATGAAAACAAATAT
ACCAAAACCCACTAAACGTGTTGCACTTGGAAATATAACAAATCAGGTTC
ATGGTCATGGAAGCAGAATTCAACCTTCAAGAGCTGCAAAGGATAAACAT
AAGGTTTGGTTGCGTATCACAGTTATCTCCCCCTCAAACTCTCGTTCTAT
GAACGCCGACCTTGCAACATTACAGTGGATATACGACGTTCGAACTAAAG
AATTGCGCTACCGATATTAGGAGGTTTTTCGCTAATGCACCTAATCTTCA
ACAGCAAGCAGTTCAACAGAAATACAAAGCACCGAATATTTGACAGAACT
ATCACTAGTTAACACTGACATTTGTTTAACGTATCGACCTTCAACGATCG
CTGCTGCATCCGTATTAGTGGCAAATAATACTTTGAAATTGGAATCTTGG
GTACTTCGTATGGAAAGTTTAGTTTTAAAAACTTTACAATTCGATGTCAG
TGTACCAACCTGCAAAGACTTCTTGAACAGATATTTGTTGGCAGCAGGTG
CTGCTGAAGAAAGTCAACTTCGTTATTTATCACAAGAAATTTGAAGAAAT
ATACCCACCAGAAGTATCAGAATTTGTTTACATAACAGACGATACATATA
CTGCCAAGCAGATGAAGTTTTTACCAAAGAGAAATTATATGGAAAAACAA
GTTGACATAAATAAAAGCATGCGTTCAGTTCTTATTGATTGGCTGGTAGA
AGTAGCAGAAGAATACAAATTAAATCCTCAAACGCTTTTCCTGACTGTAA
ATTATATCGATAGATTTCTTTCGTGTATGTCAGTTTTGCGAGGAAAACTT
CAACTTGTTGGTACTGCTTGTATGTTAGTAGCATCATTCTCCTATGATTC
TATCCCTGACACCATGTACGACAGAAAGTTTTGAAGATATTGATACAGAT
GAAGTATTACCAAACATTCTGAATATTGACCAAAATACAGATTCTGACTT
TGATGTCCCTGAATATGCACAAGACATACATAATTATTTGAAAAAGGCAG
AGGCCAACTACCATGGAACAAAATCTGATGAGTCTAAAGTTTTTGAAAAC
AAACCAAAAAGGACAAATAAATTATCTACATTAAAAGATGTCTATTCAGA
TATTCCAAGATTCAGAGAACATTCCAGGCCTTGGAAAGAAGAACAAACGA
GGAGATGAAAATGGAATGAAAACAAATATACCAAAACCCACTAAACGTGT
TGCACTTGGAAATATAACAAATCAGGTTCATGGTCATGGAAGCAGAATTC
AACCTTCAAGAGCTGCAAAGGATAAACATAAGGTTTGGTTGCGTATCACA
GTTATCTCCCCCTCAAACTCTCGTTCTATGAACGCCGACCTTGCAACATT
ACAGTGGATATACGACGTTCGAACTAAAGAATTGCGCTACCGATATTAGG
AGGTTTTTCGCTAATGCACCTAATCTTCAACAGCAAGCAGTTCAACAGAA
ATACAAAGCACCGAATATTTGACAGAACTATCACTAGTTAACACTGACAT
TTGTTTAACGTATCGACCTTCAACGATCGCTGCTGCATCCGTATTAGTGG
CAAATAATACTTTGAAATTGGAATCTTGGGTACTTCGTATGGAAAGTTTA
GTTTTAAAAACTTTACAATTCGATGTCAGTGTACCAACCTGCAAAGACTT
CTTGAACAGATATTTGTTGGCAGCAGGTGCTGCTGAAGAAAGTCAACTTC
GTTATTTATCACAAGAAATTTGAAGAAATATACCCACCAGAAGTATCAGA
ATTTGTTTACATAACAGACGATACATATACTGCCAAGCAGATGAAGTTTT
TACCAAAGAGAAATTATATGGAAAAACAAGTTGACATAAATAAAAGCATG
CGTTCAGTTCTTATTGATTGGCTGGTAGAAGTAGCAGAAGAATACAAATT
AAATCCTCAAACGCTTTTCCTGACTGTAAATTATATCGATAGATTTCTTT
CGTGTATGTCAGTTTTGCGAGGAAAACTTCAACTTGTTGGTACTGCTTGT
ATGTTAGTAGCATCATTCTCCTATGATTCTATCCCTGACACCATGTACGA
CAGAAAGTTTTGAAGATATTGATACAGATGAAGTATTACCAAACATTCTG
AATATTGACCAAAATACAGATTCTGACTTTGATGTCCCTGAATATGCACA
AGACATACATAATTATTTGAAAAAGGCAGAGGCCAACTACCATGGAACAA
AATCTGATGAGTCTAAAGTTTTTGAAAACAAACCAAAAAGGACAAATAAA
TTATCTACATTAAAAGATGTCTATTCAGATATTCCAAGATTCAGAGAACA
TTCCAGGCCTTGGAAAGAAGAACAAACGAGGAGATGAAAATGGAATGAAA
ACAAATATACCAAAACCCACTAAACGTGTTGCACTTGGAAATATAACAAA
TCAGGTTCATGGTCATGGAAGCAGAATTCAACCTTCAAGAGCTGCAAAGG
ATAAACATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034413XLOC_034413Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054610-exon-scaffold_243-1575043694:294853..295205TCONS_00054610-exon-scaffold_243-1575043694:294853..295205Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:294478..294682TCONS_00054610-exon-scaffold_243-1575043694:294478..294682Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:292376..292460TCONS_00054610-exon-scaffold_243-1575043694:292376..292460Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:291691..291857TCONS_00054610-exon-scaffold_243-1575043694:291691..291857Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:291247..291470TCONS_00054610-exon-scaffold_243-1575043694:291247..291470Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:290878..290953TCONS_00054610-exon-scaffold_243-1575043694:290878..290953Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:290463..290597TCONS_00054610-exon-scaffold_243-1575043694:290463..290597Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:289980..290093TCONS_00054610-exon-scaffold_243-1575043694:289980..290093Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:289400..289533TCONS_00054610-exon-scaffold_243-1575043694:289400..289533Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1575043694:288224..288841TCONS_00054610-exon-scaffold_243-1575043694:288224..288841Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:294853..295205TCONS_00054610-exon-scaffold_243-1510915933:294853..295205Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:294478..294682TCONS_00054610-exon-scaffold_243-1510915933:294478..294682Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:292376..292460TCONS_00054610-exon-scaffold_243-1510915933:292376..292460Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:291691..291857TCONS_00054610-exon-scaffold_243-1510915933:291691..291857Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:291247..291470TCONS_00054610-exon-scaffold_243-1510915933:291247..291470Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:290878..290953TCONS_00054610-exon-scaffold_243-1510915933:290878..290953Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:290463..290597TCONS_00054610-exon-scaffold_243-1510915933:290463..290597Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:289980..290093TCONS_00054610-exon-scaffold_243-1510915933:289980..290093Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:289400..289533TCONS_00054610-exon-scaffold_243-1510915933:289400..289533Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1510915933:288224..288841TCONS_00054610-exon-scaffold_243-1510915933:288224..288841Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:294853..295205TCONS_00054610-exon-scaffold_243-1491911889:294853..295205Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:294478..294682TCONS_00054610-exon-scaffold_243-1491911889:294478..294682Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:292376..292460TCONS_00054610-exon-scaffold_243-1491911889:292376..292460Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:291691..291857TCONS_00054610-exon-scaffold_243-1491911889:291691..291857Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:291247..291470TCONS_00054610-exon-scaffold_243-1491911889:291247..291470Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:290878..290953TCONS_00054610-exon-scaffold_243-1491911889:290878..290953Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:290463..290597TCONS_00054610-exon-scaffold_243-1491911889:290463..290597Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:289980..290093TCONS_00054610-exon-scaffold_243-1491911889:289980..290093Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:289400..289533TCONS_00054610-exon-scaffold_243-1491911889:289400..289533Clytia hemisphaericaexon
TCONS_00054610-exon-scaffold_243-1491911889:288224..288841TCONS_00054610-exon-scaffold_243-1491911889:288224..288841Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054610-proteinTCONS_00054610-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:288224..295205 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.434	19.2312	27.2425	28.7849	198.038	144.598	62.8307	62.5462	30.5726	33.1952	17.383	17.3533	8.70043	9.24322	18.0358	21.8919	50.4922	38.5813	2.26044	2.73887	17.629	13.0233	213.405	166.57	138.625	121.124	15.6514	11.4152	171.093	217.828
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
Blast
[Close]
BLAST of TCONS_00054610 vs. Swiss-Prot (Human)
Match: CCNA2 (Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2)

HSP 1 Score: 292.738 bits (748), Expect = 1.504e-90
Identity = 154/285 (54.04%), Postives = 197/285 (69.12%), Query Frame = 1 
Query:  685 SFEDIDTDEVLPNILNIDQNTDSDFDVPEYAQDIHNYLKKAEMKFLPKRNYMEKQVDINKSMRSVLIDWLVEVAEEYKLNPQTLFLTVNYIDRFLSCMSVLRGKLQLVGTACMLVASKFEEIYPPEVSEFVYITDDTYTAKQVLRMESLVLKTLQFDVSVPTCKDFLNRYLLAAGAAEESQLRYLSQYLTELSLVNTDICLTYRPSTIAAASVLVANNTLKLESWTPTLQHYSGYTTFELKNCATDIRRFFANAPNLQQQAVQQKYKAPKFGCVSQLSPPQTLVL 1539
            SFE   T ++  +I+  D+   S  +VP+Y +DIH YL++ E+K  PK  YM+KQ DI  SMR++L+DWLVEV EEYKL  +TL L VNYIDRFLS MSVLRGKLQLVGTA ML+ASKFEEIYPPEV+EFVYITDDTYT KQVLRME LVLK L FD++ PT   FL +Y L    A   ++  L+ +L ELSL++ D  L Y PS IA A+  +A  T+  +SW  +L   +GYT   LK C  D+ + +  AP   QQ++++KYK  K+  VS L+PP+TL L
Sbjct:  151 SFESPHTMDM--SIILEDEKPVSVNEVPDYHEDIHTYLREMEVKCKPKVGYMKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYFLHQQPA-NCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYTVTGQSWPESLIRKTGYTLESLKPCLMDLHQTYLKAPQHAQQSIREKYKNSKYHGVSLLNPPETLNL 432
The following BLAST results are available for this feature:
BLAST of TCONS_00054610 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNA21.504e-9054.04Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2[more]
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