TCONS_00054584 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054584
Unique NameTCONS_00054584
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054584 ID=TCONS_00054584|Name=TCONS_00054584|organism=Clytia hemisphaerica|type=transcript|length=1309bp
ATAATATATGATGTCACAAGGTATTCCACGTTCGAAGCAGTTCCAAAATG
GCTTTCAGACTTTCAGAAGAAATGTGCTAACATACCGTTTTGTGTTCTTG
CGAACAAAGTAGACCAGCCGAAAGCTGAAGGAAAGGAGTTCCCATCGTTC
AAAGAAGCTTTATTTTCTTTGGAAATTTCCAGCAAAACTGGATATAATAT
TGaagaagttcttcatcaaatccTGGAATACTTTCACCATAATGATGTCA
CCTTTATCGAACTTCCTCCTGAAGTTAAAGAAGACTCTTACAAAAAGTGC
GACCATTATTCCAAGTCAACTACTGTTTTGATTGAAGGTCACATCAAAAG
TATGTGCTTGCCATATTTACCTTTTGAGTTCAAGAATATAAGTGCTCAAG
ATGTTGCTGTAAACTGCATCAAAGCTGGTTATGTTTACACCAAATGGCTG
TGGATATCAaggaaaagatttttggttttaaaaGGAAATTATCTTTATTG
GTTTCGCGACGAGAGAAGCAAGCGGGCGGATGGTTTACTGAACCTATTGT
ATTGTAGATCGCTTTCAACTGACGAAGAAAGAAATAGTTTCACCATGACT
TATTTGAAACATTTCGAAAGCTGGTTGTCTTCCAAAAATTATAAGAGATG
TACACTTAAGTTCAATTGCTTTGACGATAAGGAAAATTGTGTTGCTTGGA
AGATCATTTTAGTTCAACAACTGGCTAAGAGCTTTCAAAATAGAAGACTT
TGCAATGTTTCATTGAGCGTCTTGCAAAAGATGGATTTCGACATCTCAAA
AAAATCTTCCCTCAAAATAAGCTCTTCTGTTGGAGATGGTTTTGAATTAt
cttacaaaaataaaaaatcaagttatgGTTCAGGTTATTTTCACATGGCT
GATCTTCAGttTTTCACGAATGCTTCTCGAGATAAATATTTCATCTTCAT
CAAGGATGTAGCTGTCATTTGTATTCTGGATCCCCAAGAAAACTTCAGGA
CCATCGGTTCTCAATTAAAGAGACTATTTGGTGTGCAATGTTTTGGTGGA
AGCTTGACAGAGAGACACTACATTGAAATTTTCGATTTAGCGTATCGTTG
TGCATGTTCTCAAATGTCTATCACTGCTATTGAACCCTTACATGATGTTT
TCCGCCAACATTGGGAAAAAAGtgatCGTTTGAAAGAAATCAATTTGCGT
GGATATCAGATGACCAATCGAGATTTTGTTGCCATCACTCATACTTTGTC
GCGTTATCCGTTCATTTCAACAATTTGCCTTCGAAACTGTGCAATGGACA
GCAAGGGTG
Run BLAST on NCBI

protein sequence of TCONS_00054584-protein

>TCONS_00054584-protein ID=TCONS_00054584-protein|Name=TCONS_00054584-protein|organism=Clytia hemisphaerica|type=polypeptide|length=436bp
IIYDVTRYSTFEAVPKWLSDFQKKCANIPFCVLANKVDQPKAEGKEFPSF
KEALFSLEISSKTGYNIEEVLHQILEYFHHNDVTFIELPPEVKEDSYKKC
DHYSKSTTVLIEGHIKSMCLPYLPFEFKNISAQDVAVNCIKAGYVYTKWL
WISRKRFLVLKGNYLYWFRDERSKRADGLLNLLYCRSLSTDEERNSFTMT
YLKHFESWLSSKNYKRCTLKFNCFDDKENCVAWKIILVQQLAKSFQNRRL
CNVSLSVLQKMDFDISKKSSLKISSSVGDGFELSYKNKKSSYGSGYFHMA
DLQFFTNASRDKYFIFIKDVAVICILDPQENFRTIGSQLKRLFGVQCFGG
SLTERHYIEIFDLAYRCACSQMSITAIEPLHDVFRQHWEKSDRLKEINLR
GYQMTNRDFVAITHTLSRYPFISTICLRNCAMDSKG
Run BLAST on NCBI

transcript from alignment at scaffold_243:929969..932733+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054584 ID=TCONS_00054584|Name=TCONS_00054584|organism=Clytia hemisphaerica|type=transcript|length=2765bp|location=Sequence derived from alignment at scaffold_243:929969..932733+ (Clytia hemisphaerica)
ATAATATATGATGTCACAAGGTATTCCACGTTCGAAGCAGTTCCAAAATG
GCTTTCAGACTTTCAGAAGAAATGTGCTAACATACCGTTTTGTGTTCTTG
CGAACAAAGTAGACCAGCCGAAAGCTGAAGGAAAGGAGTTCCCATCGTTC
AAAGAAGCTTTATTTTCGTAAGTTTAATTAATAAACACTATACTGGTCAT
ATAATACGGTACTTGTCATGGCAATACGTTTGGCAGAGATCAACTTTAAG
TCACGGTAAATTTCAATATCAAACTTTTTTGGGGATTTTCTGCTTTAAGA
CGTATTGATAAAATTGACGATTTCAAAGACTACAGAAATGATTTGTGCTG
CGAAGTGTACTGAATCAGATTCTTGAATAAAGGCTTTCTACAATAATTTT
CAGGAATATATTTGGTTTATGATTTCTATGTGTCTTTCATATCAATGGCA
AGCTTTTTAAGTGTCTTAGATACTTACATTtcagatgtttttcttttgat
aagaATTTTTTCAGGTAGCCTGCGTGTTATGTTTCAAATTTCTCTGCGTT
TCAGTTTGGAAATTTCCAGCAAAACTGGATATAATATTGaagaagttctt
catcaaatccTGGAATACTTTCACCATAATGATGTCACCTTTATCGAACT
TCCTCCTGAAGTTAAAGAAGACTCTTACAAAAAGTGCGACCATTATTCCA
AGTCAACTACTGTTTTGATTGAAGGTCACATCAAAAGTATGTGCTTGCCA
TATTTACCTTTTGAGTTCAAGAATATAAGTGCTCAAGATGTTGCTGTAAA
CTGCATCAAAGCTGGTTATGTTTACACCAAATGGCTGTGGATATCAagga
aaagatttttggttttaaaaGGAAATTATCTTTATTGGTTTCGCGACGAG
AGAAGCAAGCGGGCGGATGGTTTACTGAACCTATTGTATTGTAGATCGCT
TTCAACTGACGAAGAAAGAAATAGTTTCACCATGACTTATTTGAAACATT
TCGAAAGCTGGTTGTCTTCCAAAAATTATAAGAGATGTACACTTAAGTTC
AATTGCTTTGACGATAAGGAAAATTGTGTTGCTTGGAAGATCATTTTAGT
TCAACAACTGGCTAAGGTGGGTCAATTATTGTTCATCGTCTCAGATTTTC
AACTGCcaattattttaaagttttggcAAAACAAATTAGGTTTAATATGA
CTTTAACTGAAATTACATTAAAATTTTAGAGCTTTCAAAATAGAAGACTT
TGCAATGTTTCATTGAGCGTCTTGCAAAAGATGGATTTCGACATCTCAAA
AAAATCTTCCCTCAAAATAAGCTCTTCTGTTGGAGATGGTTTTGAATTAt
cttacaaaaataaaaaatcaagttatgGTTCAGGTTATTTTCACATGGCT
GATCTTCAGGTAAGCTTAAAGGACATCATTTAATGTATCTCCTAGTCCTA
ACATTTGCTTACACACTTTCTCTCCCTCCCGCGTCGCACAAGTATAAATT
TTGAGGATTCTTTTTGGCTATTTCTGCATTAGAGACACGCCTCCTTTCTT
TATcataaaaaaataccaaaagtaCCGTTTTACAgccaaagaacattttt
tgttgatttgggCTATATATCAGGAAGgaatataaaaacattattaatta
atttgtttgtttgttttagttTTTCACGAATGCTTCTCGAGATAAATATT
TCATCTTCATCAAGGATGTAGCTGTCATTTGTATTCTGGATCCCCAAGAA
AACTTCAGGTATTATTGCGTCCGTTCGAAtctaatctcataacagatcat
ccattctgctcTGCTCTAAAAGGTCGTGGTGAATGTGACAACCTTAACCG
CGttgttttttgcttcaaaatgaaagcgaaagcgactgggttttaatttg
gtttttgttttttggtttAGGTGATATTGTTTTGCTTCAGCCAATCACCA
CGCTCAAAATCTCATTTATATCCCAAAACTGGGtgaaaaagatcaaagtg
gTGCGCCAACttgggcagattctcttacggagctatggcctttagagtga
atacgtTCCAGCACGGAGTAAATAGATTCTGCTCAGAGATATTATACAAT
ATTGATAAATTGGTATTTGATTTCATTTAGGACCATCGGTTCTCAATTAA
AGAGACTATTTGGTGTGCAATGTTTTGGTGGAAGCTTGACAGAGAGACAC
TACATTGAAATTTTCGATTTAGCGTATCGTTGTGCATGTTCTCAAATGTC
TATCACTGCTATTGAACCCTTACATGATGTTTTCCGCCAACATTGGGAAA
AAAGGTTCGAAAATTTGTTTAGTTGatgaaaaaaaagccttttaaGGAAG
AAAAAGTctggaaaatttaaaggaattaGATAAGAAATACTGTATATAGA
CTTTCCAACTTTTGGGTCTAAACAGGTCgggaataaacgccccctcgaat
aaagaCCCCTCCTTCAAGGAAACATTTTCAACAACcgccccctcaaataa
atgcCCCCCCCTtcctcgaataaacacccctctTAAAATCCAGAAATTTA
ATTAACGCTTCGGGAGTTTATTCGAAGTGATACGGACCCTACAAAATTAA
TAGACTACCATGTTacttcaattttcagtgatCGTTTGAAAGAAATCAAT
TTGCGTGGATATCAGATGACCAATCGAGATTTTGTTGCCATCACTCATAC
TTTGTCGCGTTATCCGTTCATTTCAACAATTTGCCTTCGAAACTGTGCAA
TGGACAGCAAGGGTG

Coding sequence (CDS) from alignment at scaffold_243:929969..932733+

>TCONS_00054584 ID=TCONS_00054584|Name=TCONS_00054584|organism=Clytia hemisphaerica|type=CDS|length=7848bp|location=Sequence derived from alignment at scaffold_243:929969..932733+ (Clytia hemisphaerica)
ATAATATATGATGTCACAAGGTATTCCACGTTCGAAGCAGTTCCAAAATG
GCTTTCAGACTTTCAGAAGAAATGTGCTAACATACCGTTTTGTGTTCTTG
CGAACAAAGTAGACCAGCCGAAAGCTGAAGGAAAGGAGTTCCCATCGTTC
AAAGAAGCTTTATTTTCTTTGGAAATTTCCAGCAAAACTGGATATAATAT
TGaagaagttcttcatcaaatccTGGAATACTTTCACCATAATGATGTCA
CCTTTATCGAACTTCCTCCTGAAGTTAAAGAAGACTCTTACAAAAAGTGC
GACCATTATTCCAAGTCAACTACTGTTTTGATTGAAGGTCACATCAAAAG
TATGTGCTTGCCATATTTACCTTTTGAGTTCAAGAATATAAGTGCTCAAG
ATGTTGCTGTAAACTGCATCAAAGCTGGTTATGTTTACACCAAATGGCTG
TGGATATCAaggaaaagatttttggttttaaaaGGAAATTATCTTTATTG
GTTTCGCGACGAGAGAAGCAAGCGGGCGGATGGTTTACTGAACCTATTGT
ATTGTAGATCGCTTTCAACTGACGAAGAAAGAAATAGTTTCACCATGACT
TATTTGAAACATTTCGAAAGCTGGTTGTCTTCCAAAAATTATAAGAGATG
TACACTTAAGTTCAATTGCTTTGACGATAAGGAAAATTGTGTTGCTTGGA
AGATCATTTTAGTTCAACAACTGGCTAAGAGCTTTCAAAATAGAAGACTT
TGCAATGTTTCATTGAGCGTCTTGCAAAAGATGGATTTCGACATCTCAAA
AAAATCTTCCCTCAAAATAAGCTCTTCTGTTGGAGATGGTTTTGAATTAt
cttacaaaaataaaaaatcaagttatgGTTCAGGTTATTTTCACATGGCT
GATCTTCAGttTTTCACGAATGCTTCTCGAGATAAATATTTCATCTTCAT
CAAGGATGTAGCTGTCATTTGTATTCTGGATCCCCAAGAAAACTTCAGGA
CCATCGGTTCTCAATTAAAGAGACTATTTGGTGTGCAATGTTTTGGTGGA
AGCTTGACAGAGAGACACTACATTGAAATTTTCGATTTAGCGTATCGTTG
TGCATGTTCTCAAATGTCTATCACTGCTATTGAACCCTTACATGATGTTT
TCCGCCAACATTGGGAAAAAAGtgatCGTTTGAAAGAAATCAATTTGCGT
GGATATCAGATGACCAATCGAGATTTTGTTGCCATCACTCATACTTTGTC
GCGTTATCCGTTCATTTCAACAATTTGCCTTCGAAACTGTGCAATGGACA
GCAAGGGTATAATATATGATGTCACAAGGTATTCCACGTTCGAAGCAGTT
CCAAAATGGCTTTCAGACTTTCAGAAGAAATGTGCTAACATACCGTTTTG
TGTTCTTGCGAACAAAGTAGACCAGCCGAAAGCTGAAGGAAAGGAGTTCC
CATCGTTCAAAGAAGCTTTATTTTCTTTGGAAATTTCCAGCAAAACTGGA
TATAATATTGaagaagttcttcatcaaatccTGGAATACTTTCACCATAA
TGATGTCACCTTTATCGAACTTCCTCCTGAAGTTAAAGAAGACTCTTACA
AAAAGTGCGACCATTATTCCAAGTCAACTACTGTTTTGATTGAAGGTCAC
ATCAAAAGTATGTGCTTGCCATATTTACCTTTTGAGTTCAAGAATATAAG
TGCTCAAGATGTTGCTGTAAACTGCATCAAAGCTGGTTATGTTTACACCA
AATGGCTGTGGATATCAaggaaaagatttttggttttaaaaGGAAATTAT
CTTTATTGGTTTCGCGACGAGAGAAGCAAGCGGGCGGATGGTTTACTGAA
CCTATTGTATTGTAGATCGCTTTCAACTGACGAAGAAAGAAATAGTTTCA
CCATGACTTATTTGAAACATTTCGAAAGCTGGTTGTCTTCCAAAAATTAT
AAGAGATGTACACTTAAGTTCAATTGCTTTGACGATAAGGAAAATTGTGT
TGCTTGGAAGATCATTTTAGTTCAACAACTGGCTAAGAGCTTTCAAAATA
GAAGACTTTGCAATGTTTCATTGAGCGTCTTGCAAAAGATGGATTTCGAC
ATCTCAAAAAAATCTTCCCTCAAAATAAGCTCTTCTGTTGGAGATGGTTT
TGAATTAtcttacaaaaataaaaaatcaagttatgGTTCAGGTTATTTTC
ACATGGCTGATCTTCAGttTTTCACGAATGCTTCTCGAGATAAATATTTC
ATCTTCATCAAGGATGTAGCTGTCATTTGTATTCTGGATCCCCAAGAAAA
CTTCAGGACCATCGGTTCTCAATTAAAGAGACTATTTGGTGTGCAATGTT
TTGGTGGAAGCTTGACAGAGAGACACTACATTGAAATTTTCGATTTAGCG
TATCGTTGTGCATGTTCTCAAATGTCTATCACTGCTATTGAACCCTTACA
TGATGTTTTCCGCCAACATTGGGAAAAAAGtgatCGTTTGAAAGAAATCA
ATTTGCGTGGATATCAGATGACCAATCGAGATTTTGTTGCCATCACTCAT
ACTTTGTCGCGTTATCCGTTCATTTCAACAATTTGCCTTCGAAACTGTGC
AATGGACAGCAAGGGTATAATATATGATGTCACAAGGTATTCCACGTTCG
AAGCAGTTCCAAAATGGCTTTCAGACTTTCAGAAGAAATGTGCTAACATA
CCGTTTTGTGTTCTTGCGAACAAAGTAGACCAGCCGAAAGCTGAAGGAAA
GGAGTTCCCATCGTTCAAAGAAGCTTTATTTTCTTTGGAAATTTCCAGCA
AAACTGGATATAATATTGaagaagttcttcatcaaatccTGGAATACTTT
CACCATAATGATGTCACCTTTATCGAACTTCCTCCTGAAGTTAAAGAAGA
CTCTTACAAAAAGTGCGACCATTATTCCAAGTCAACTACTGTTTTGATTG
AAGGTCACATCAAAAGTATGTGCTTGCCATATTTACCTTTTGAGTTCAAG
AATATAAGTGCTCAAGATGTTGCTGTAAACTGCATCAAAGCTGGTTATGT
TTACACCAAATGGCTGTGGATATCAaggaaaagatttttggttttaaaaG
GAAATTATCTTTATTGGTTTCGCGACGAGAGAAGCAAGCGGGCGGATGGT
TTACTGAACCTATTGTATTGTAGATCGCTTTCAACTGACGAAGAAAGAAA
TAGTTTCACCATGACTTATTTGAAACATTTCGAAAGCTGGTTGTCTTCCA
AAAATTATAAGAGATGTACACTTAAGTTCAATTGCTTTGACGATAAGGAA
AATTGTGTTGCTTGGAAGATCATTTTAGTTCAACAACTGGCTAAGAGCTT
TCAAAATAGAAGACTTTGCAATGTTTCATTGAGCGTCTTGCAAAAGATGG
ATTTCGACATCTCAAAAAAATCTTCCCTCAAAATAAGCTCTTCTGTTGGA
GATGGTTTTGAATTAtcttacaaaaataaaaaatcaagttatgGTTCAGG
TTATTTTCACATGGCTGATCTTCAGttTTTCACGAATGCTTCTCGAGATA
AATATTTCATCTTCATCAAGGATGTAGCTGTCATTTGTATTCTGGATCCC
CAAGAAAACTTCAGGACCATCGGTTCTCAATTAAAGAGACTATTTGGTGT
GCAATGTTTTGGTGGAAGCTTGACAGAGAGACACTACATTGAAATTTTCG
ATTTAGCGTATCGTTGTGCATGTTCTCAAATGTCTATCACTGCTATTGAA
CCCTTACATGATGTTTTCCGCCAACATTGGGAAAAAAGtgatCGTTTGAA
AGAAATCAATTTGCGTGGATATCAGATGACCAATCGAGATTTTGTTGCCA
TCACTCATACTTTGTCGCGTTATCCGTTCATTTCAACAATTTGCCTTCGA
AACTGTGCAATGGACAGCAAGGGTATAATATATGATGTCACAAGGTATTC
CACGTTCGAAGCAGTTCCAAAATGGCTTTCAGACTTTCAGAAGAAATGTG
CTAACATACCGTTTTGTGTTCTTGCGAACAAAGTAGACCAGCCGAAAGCT
GAAGGAAAGGAGTTCCCATCGTTCAAAGAAGCTTTATTTTCTTTGGAAAT
TTCCAGCAAAACTGGATATAATATTGaagaagttcttcatcaaatccTGG
AATACTTTCACCATAATGATGTCACCTTTATCGAACTTCCTCCTGAAGTT
AAAGAAGACTCTTACAAAAAGTGCGACCATTATTCCAAGTCAACTACTGT
TTTGATTGAAGGTCACATCAAAAGTATGTGCTTGCCATATTTACCTTTTG
AGTTCAAGAATATAAGTGCTCAAGATGTTGCTGTAAACTGCATCAAAGCT
GGTTATGTTTACACCAAATGGCTGTGGATATCAaggaaaagatttttggt
tttaaaaGGAAATTATCTTTATTGGTTTCGCGACGAGAGAAGCAAGCGGG
CGGATGGTTTACTGAACCTATTGTATTGTAGATCGCTTTCAACTGACGAA
GAAAGAAATAGTTTCACCATGACTTATTTGAAACATTTCGAAAGCTGGTT
GTCTTCCAAAAATTATAAGAGATGTACACTTAAGTTCAATTGCTTTGACG
ATAAGGAAAATTGTGTTGCTTGGAAGATCATTTTAGTTCAACAACTGGCT
AAGAGCTTTCAAAATAGAAGACTTTGCAATGTTTCATTGAGCGTCTTGCA
AAAGATGGATTTCGACATCTCAAAAAAATCTTCCCTCAAAATAAGCTCTT
CTGTTGGAGATGGTTTTGAATTAtcttacaaaaataaaaaatcaagttat
gGTTCAGGTTATTTTCACATGGCTGATCTTCAGttTTTCACGAATGCTTC
TCGAGATAAATATTTCATCTTCATCAAGGATGTAGCTGTCATTTGTATTC
TGGATCCCCAAGAAAACTTCAGGACCATCGGTTCTCAATTAAAGAGACTA
TTTGGTGTGCAATGTTTTGGTGGAAGCTTGACAGAGAGACACTACATTGA
AATTTTCGATTTAGCGTATCGTTGTGCATGTTCTCAAATGTCTATCACTG
CTATTGAACCCTTACATGATGTTTTCCGCCAACATTGGGAAAAAAGtgat
CGTTTGAAAGAAATCAATTTGCGTGGATATCAGATGACCAATCGAGATTT
TGTTGCCATCACTCATACTTTGTCGCGTTATCCGTTCATTTCAACAATTT
GCCTTCGAAACTGTGCAATGGACAGCAAGGGTATAATATATGATGTCACA
AGGTATTCCACGTTCGAAGCAGTTCCAAAATGGCTTTCAGACTTTCAGAA
GAAATGTGCTAACATACCGTTTTGTGTTCTTGCGAACAAAGTAGACCAGC
CGAAAGCTGAAGGAAAGGAGTTCCCATCGTTCAAAGAAGCTTTATTTTCT
TTGGAAATTTCCAGCAAAACTGGATATAATATTGaagaagttcttcatca
aatccTGGAATACTTTCACCATAATGATGTCACCTTTATCGAACTTCCTC
CTGAAGTTAAAGAAGACTCTTACAAAAAGTGCGACCATTATTCCAAGTCA
ACTACTGTTTTGATTGAAGGTCACATCAAAAGTATGTGCTTGCCATATTT
ACCTTTTGAGTTCAAGAATATAAGTGCTCAAGATGTTGCTGTAAACTGCA
TCAAAGCTGGTTATGTTTACACCAAATGGCTGTGGATATCAaggaaaaga
tttttggttttaaaaGGAAATTATCTTTATTGGTTTCGCGACGAGAGAAG
CAAGCGGGCGGATGGTTTACTGAACCTATTGTATTGTAGATCGCTTTCAA
CTGACGAAGAAAGAAATAGTTTCACCATGACTTATTTGAAACATTTCGAA
AGCTGGTTGTCTTCCAAAAATTATAAGAGATGTACACTTAAGTTCAATTG
CTTTGACGATAAGGAAAATTGTGTTGCTTGGAAGATCATTTTAGTTCAAC
AACTGGCTAAGAGCTTTCAAAATAGAAGACTTTGCAATGTTTCATTGAGC
GTCTTGCAAAAGATGGATTTCGACATCTCAAAAAAATCTTCCCTCAAAAT
AAGCTCTTCTGTTGGAGATGGTTTTGAATTAtcttacaaaaataaaaaat
caagttatgGTTCAGGTTATTTTCACATGGCTGATCTTCAGttTTTCACG
AATGCTTCTCGAGATAAATATTTCATCTTCATCAAGGATGTAGCTGTCAT
TTGTATTCTGGATCCCCAAGAAAACTTCAGGACCATCGGTTCTCAATTAA
AGAGACTATTTGGTGTGCAATGTTTTGGTGGAAGCTTGACAGAGAGACAC
TACATTGAAATTTTCGATTTAGCGTATCGTTGTGCATGTTCTCAAATGTC
TATCACTGCTATTGAACCCTTACATGATGTTTTCCGCCAACATTGGGAAA
AAAGtgatCGTTTGAAAGAAATCAATTTGCGTGGATATCAGATGACCAAT
CGAGATTTTGTTGCCATCACTCATACTTTGTCGCGTTATCCGTTCATTTC
AACAATTTGCCTTCGAAACTGTGCAATGGACAGCAAGGGTATAATATATG
ATGTCACAAGGTATTCCACGTTCGAAGCAGTTCCAAAATGGCTTTCAGAC
TTTCAGAAGAAATGTGCTAACATACCGTTTTGTGTTCTTGCGAACAAAGT
AGACCAGCCGAAAGCTGAAGGAAAGGAGTTCCCATCGTTCAAAGAAGCTT
TATTTTCTTTGGAAATTTCCAGCAAAACTGGATATAATATTGaagaagtt
cttcatcaaatccTGGAATACTTTCACCATAATGATGTCACCTTTATCGA
ACTTCCTCCTGAAGTTAAAGAAGACTCTTACAAAAAGTGCGACCATTATT
CCAAGTCAACTACTGTTTTGATTGAAGGTCACATCAAAAGTATGTGCTTG
CCATATTTACCTTTTGAGTTCAAGAATATAAGTGCTCAAGATGTTGCTGT
AAACTGCATCAAAGCTGGTTATGTTTACACCAAATGGCTGTGGATATCAa
ggaaaagatttttggttttaaaaGGAAATTATCTTTATTGGTTTCGCGAC
GAGAGAAGCAAGCGGGCGGATGGTTTACTGAACCTATTGTATTGTAGATC
GCTTTCAACTGACGAAGAAAGAAATAGTTTCACCATGACTTATTTGAAAC
ATTTCGAAAGCTGGTTGTCTTCCAAAAATTATAAGAGATGTACACTTAAG
TTCAATTGCTTTGACGATAAGGAAAATTGTGTTGCTTGGAAGATCATTTT
AGTTCAACAACTGGCTAAGAGCTTTCAAAATAGAAGACTTTGCAATGTTT
CATTGAGCGTCTTGCAAAAGATGGATTTCGACATCTCAAAAAAATCTTCC
CTCAAAATAAGCTCTTCTGTTGGAGATGGTTTTGAATTAtcttacaaaaa
taaaaaatcaagttatgGTTCAGGTTATTTTCACATGGCTGATCTTCAGt
tTTTCACGAATGCTTCTCGAGATAAATATTTCATCTTCATCAAGGATGTA
GCTGTCATTTGTATTCTGGATCCCCAAGAAAACTTCAGGACCATCGGTTC
TCAATTAAAGAGACTATTTGGTGTGCAATGTTTTGGTGGAAGCTTGACAG
AGAGACACTACATTGAAATTTTCGATTTAGCGTATCGTTGTGCATGTTCT
CAAATGTCTATCACTGCTATTGAACCCTTACATGATGTTTTCCGCCAACA
TTGGGAAAAAAGtgatCGTTTGAAAGAAATCAATTTGCGTGGATATCAGA
TGACCAATCGAGATTTTGTTGCCATCACTCATACTTTGTCGCGTTATCCG
TTCATTTCAACAATTTGCCTTCGAAACTGTGCAATGGACAGCAAGGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034402XLOC_034402Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054584-proteinTCONS_00054584-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054584-exon-scaffold_243-1491911889:929969..930135TCONS_00054584-exon-scaffold_243-1491911889:929969..930135Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1510915933:929969..930135TCONS_00054584-exon-scaffold_243-1510915933:929969..930135Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1575043694:929969..930135TCONS_00054584-exon-scaffold_243-1575043694:929969..930135Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1491911889:930523..931084TCONS_00054584-exon-scaffold_243-1491911889:930523..931084Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1510915933:930523..931084TCONS_00054584-exon-scaffold_243-1510915933:930523..931084Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1575043694:930523..931084TCONS_00054584-exon-scaffold_243-1575043694:930523..931084Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1491911889:931198..931377TCONS_00054584-exon-scaffold_243-1491911889:931198..931377Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1510915933:931198..931377TCONS_00054584-exon-scaffold_243-1510915933:931198..931377Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1575043694:931198..931377TCONS_00054584-exon-scaffold_243-1575043694:931198..931377Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1491911889:931638..931726TCONS_00054584-exon-scaffold_243-1491911889:931638..931726Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1510915933:931638..931726TCONS_00054584-exon-scaffold_243-1510915933:931638..931726Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1575043694:931638..931726TCONS_00054584-exon-scaffold_243-1575043694:931638..931726Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1491911889:932099..932272TCONS_00054584-exon-scaffold_243-1491911889:932099..932272Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1510915933:932099..932272TCONS_00054584-exon-scaffold_243-1510915933:932099..932272Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1575043694:932099..932272TCONS_00054584-exon-scaffold_243-1575043694:932099..932272Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1491911889:932597..932733TCONS_00054584-exon-scaffold_243-1491911889:932597..932733Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1510915933:932597..932733TCONS_00054584-exon-scaffold_243-1510915933:932597..932733Clytia hemisphaericaexon
TCONS_00054584-exon-scaffold_243-1575043694:932597..932733TCONS_00054584-exon-scaffold_243-1575043694:932597..932733Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:929969..932733 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06433	0.786282	0.474733	0.285817	0.30446	0.0687395	1.28544	1.12577	1.68507	1.68325	0.947607	1.00956	1.13686	0.957875	2.98519	3.06599	1.96116	2.82906	2.02282	2.332	2.24521	1.91649	1.73806	1.94997	0.865702	1.51433	1.01717	1.03835	5.11908	3.50134
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR011993PH_dom-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054584 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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